Basic Information

Insect: Vollenhovia emeryi
Gene Symbol: -
Assembly: GCA_000949405.1
Location: NW:3688702-3693340[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.2 3.2e+02 1.7 0.1 1 9 354 362 354 376 0.69

2 11 1.1e-06 8.2e-05 22.5 1.8 2 23 445 466 444 466 0.97

3 11 5.1e-06 0.00039 20.3 0.5 1 23 472 494 472 494 0.98

4 11 0.00032 0.025 14.7 2.4 1 23 500 522 500 522 0.98

5 11 0.00024 0.018 15.1 3.2 1 23 528 550 528 550 0.98

6 11 0.0004 0.03 14.4 1.3 1 23 556 578 556 578 0.98

7 11 3.2e-07 2.5e-05 24.1 0.4 1 23 586 608 586 608 0.98

8 11 0.0041 0.32 11.2 0.2 1 23 614 636 614 636 0.94

9 11 1.2e-05 0.00091 19.2 2.2 1 23 642 664 642 664 0.98

10 11 1.7e-05 0.0013 18.7 0.6 1 23 670 692 670 692 0.98

11 11 3.3e-06 0.00025 20.9 1.9 1 23 698 720 698 721 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.2	3.2e+02	1.7	0.1	1	9	354	362	354	376	0.69
2	11	1.1e-06	8.2e-05	22.5	1.8	2	23	445	466	444	466	0.97
3	11	5.1e-06	0.00039	20.3	0.5	1	23	472	494	472	494	0.98
4	11	0.00032	0.025	14.7	2.4	1	23	500	522	500	522	0.98
5	11	0.00024	0.018	15.1	3.2	1	23	528	550	528	550	0.98
6	11	0.0004	0.03	14.4	1.3	1	23	556	578	556	578	0.98
7	11	3.2e-07	2.5e-05	24.1	0.4	1	23	586	608	586	608	0.98
8	11	0.0041	0.32	11.2	0.2	1	23	614	636	614	636	0.94
9	11	1.2e-05	0.00091	19.2	2.2	1	23	642	664	642	664	0.98
10	11	1.7e-05	0.0013	18.7	0.6	1	23	670	692	670	692	0.98
11	11	3.3e-06	0.00025	20.9	1.9	1	23	698	720	698	721	0.96

Sequence Information

Coding Sequence: ATGGCCGTCGTCGAGGAGTTCGATTACCTGTGCCGCCTGTGCGCGACCAAGACCAGCATCCTGATGGGCCTGCCGATATTCGAGGCCGGCGAGCAGATGCGCAACATCGACAAGAAGATAGCGGCCTGCCTGCCGGTCCAAGTGTCGTTGACGGACCAACTGCCAAAAGTGGTCTGCGAGGAGTGCGCGTTCAAGCTGGATCAGCTGTTTGACTTTCGCGAGAAGTGCCTGCACACCGAGGGCATGTTCATGCAGATGCTGAAGGACATCTGCAAGGAGGAGGTCGTGCGCATGTCGGAGCACGATTTGGCGAGTGTGAATAACATGGGCACAATCCAGAGGAACCTGAATAGCATACAGATGAATAACGAAAATGTACAAAGCCACCCGGCGGTGGCGCACGAGGCGGCCGAGTCCACCATACACACGATGCAGGTGATGGACGAGATGGACCTGGCCGGTGGCGAGCAAGTGGTCACCCAGGAGGAAATGGTCCAGCAGGACGCCGATATACAAGGCATCGACTGTCTGGACGGCGACACCGTGAGAATGGTCGACGAACACATGCGCGAGGTTTCGAACCATCAGATCACGATGCACTTGGATAGCGACATGACTGTAGTGAGTAACTTGGATGGCCACCACTTGAGTCAATTAGGGATAAATTATGTTACCTCTATCAATCCTGAAGATCAGAACCACGAGCAGATAGTGCATTTCTGTGAAAGTGTAAAATATGAGGGAGATCCTACAAAATCGGACTATCACAGATTGCAAGACAGATTAACTACGGAAGAGTCGCAGCACGTACTAAAAAATGATGTACCAGTAGACAATTTTGTGTCCTCTCAAGCTGAAACGGAGAACGAGATAGACGAGTCTTGCCTGAACGAAAACGGGACTCGCGAACACGTGGACTCTGTGAATGCTTTACCATCGACGAGTGAGATAAACGGCATGTCCTGCGAAATAATGGTTAAATACACGAAGAGAACGAAGCACGCGCTGCTGGAGTCCATGCTCAACAACCCCACTGCAGATGAGACCGGCTCGCACTGGTACGTGTGCCCCTTCTGCAACGAAGCTGCCCTGGAAACAGCCAACTTGGTCGCACACTTCGAGCAGCATTTCTGCTGCTGTCCCTGCGACTTATATTTTACCAACGTCGAGGTGTTAAATCTACACAAAGAGCAATGCAATGTATATAAAGCAAAAGTGGTCGACAAGGAGAAGAAGGACGCGCAGTTAAACGCAGTGTCGCCGCGAGAGGGCAACGACACTCAAGAAGGGCAGAAGAAACAGTCGACGGTGAGACGGAAGTGGACCGCGAAGGTGTGCACGGAATGCGGCAAGCAGTACAAGTCGAATTACAAGCTGCAGGAGCACATGCGCAAGCACACGGGCGAGAAGCCGTTTCAGTGTACGACGTGCGACAAGGCGTTTCGCAGCAAGATCGGCCTCGCGCAGCACACGGCCACGCACACGGGCCAGTTCGACTACAACTGCTCCACGTGCGGCAAGGGATTCCAGTGCAAGAGCTATCTCATTGTACACCAAAGAGTCCACTCGGACCTGAAGCCGTACTCGTGCACCAAGTGCAGCCAGAAGTTTAAGACGAAGCAGTCGCTGCTGGACCACGAGAACCGCCACCTGGGCGTGAAGCCGTACATGTGCGAGGTCTGCGGCCGCGGTTTTATCACCAAGGGTCTCTGCAAAAGCCACCAGAAGATACACTCAGGCACCGACAATCGCCAGTATCCGTGCGCGGTGTGCAACAAGATGTTCGTCAGCAAGAGCTACCTGAACACGCACTTGCGCATTCACACGGGCGAGAAGCCGTATCTGTGCGAGGTGTGTGGCAAGGGGTTCCTCACGCGTGTTGACCTCAGAATCCACTCGACCATGCACACTGGCGAGAAGAGCTTCAAGTGCGAGATGTGCGGCAAGGTgttcgcgcgacgcgcggctcTACGCTGCCACCGGCGCTCGCACACGGGCGAGCGTCCGTACAGATGCGACGTCTGTGGCAAAACGTTCACACAGTTCAGCCCGATGGCGATCCACAAGCGCCTGCACACCGGCGAGCGGCCGTACGAGTGCGGCGAGTGCGGCAAGGCTTTCGTGTCCAGGTCGACCATGATGTCTCACAGGAAGAAGCATCACGTCACGACGGCTATGCAAAAGGACGCGTCTGTGACGCATAACGAGGACGCGGAGGTCAAGCTCATTCTCTCGTCCGATATCATAGTGCGAGATACGAACGATGGGATCCAAATCACCGATTGA
Protein Sequence: MAVVEEFDYLCRLCATKTSILMGLPIFEAGEQMRNIDKKIAACLPVQVSLTDQLPKVVCEECAFKLDQLFDFREKCLHTEGMFMQMLKDICKEEVVRMSEHDLASVNNMGTIQRNLNSIQMNNENVQSHPAVAHEAAESTIHTMQVMDEMDLAGGEQVVTQEEMVQQDADIQGIDCLDGDTVRMVDEHMREVSNHQITMHLDSDMTVVSNLDGHHLSQLGINYVTSINPEDQNHEQIVHFCESVKYEGDPTKSDYHRLQDRLTTEESQHVLKNDVPVDNFVSSQAETENEIDESCLNENGTREHVDSVNALPSTSEINGMSCEIMVKYTKRTKHALLESMLNNPTADETGSHWYVCPFCNEAALETANLVAHFEQHFCCCPCDLYFTNVEVLNLHKEQCNVYKAKVVDKEKKDAQLNAVSPREGNDTQEGQKKQSTVRRKWTAKVCTECGKQYKSNYKLQEHMRKHTGEKPFQCTTCDKAFRSKIGLAQHTATHTGQFDYNCSTCGKGFQCKSYLIVHQRVHSDLKPYSCTKCSQKFKTKQSLLDHENRHLGVKPYMCEVCGRGFITKGLCKSHQKIHSGTDNRQYPCAVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLRIHSTMHTGEKSFKCEMCGKVFARRAALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYECGECGKAFVSRSTMMSHRKKHHVTTAMQKDASVTHNEDAEVKLILSSDIIVRDTNDGIQITD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01087395;
90% Identity: iTF_00385783;
80% Identity: -