Veme004186.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- TFIP11
- Assembly
- GCA_000949405.1
- Location
- NW:566305-570984[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-61 5.6e-58 196.3 12.3 75 275 272 465 221 465 0.91 2 2 0.034 1.5e+02 1.3 0.0 245 270 480 505 473 510 0.84
Sequence Information
- Coding Sequence
- ATGTCTGAGAACGAAGTGGAGAGCTTCGAGATCCCTGAATATGATTTGGACAAAGAATTCAACACGGCCCGTCCTCGACGCAAGCTCTCGAGGAAACAACAAATGCTAGGAATATGGGCAGACGACAGCAATGAGGATGAACTATCTGCCAGACCATCTTTCAAGACCTTCAGTAAGGATCCTAAAAATTATATGGCACCGGTTAATTTTGTCGCTGGTGGTAGCCAACAGGCAGGAAAActgaaggagaaggaagatgAGGACGATGAAGAAGACAAGGAAGAAAGGGAGGCAAAGCACAGTAGTTCGAGTTCAGCAGATCAGAGGCCAAATTCCGAATCACGTACGCCCTTAAACTTGGATAGTCTGCGTAAAAAGCGCAATAAAGTGGAAGTGAAAAGATTGCAGGGCGTGTGTACTTCCCAACTGCAAAGTAGTTGGGAAGTACAGGGGATTGGCACCAAACTATTGCTGCAGATGGGATTTAAACCCGGTTTGGGATTAGGTAAGCATTTACAAGGGATTAGTGCGCCTGTGGAGGCACGTCCCAGAAAAGGGAGAGGCGCCATTGGGGCATACGGCCCCGAGAAGAagataaaggaagaaaaaaagaaagatgtcATCAACAAATCTAATTTGTCTAAAAGTACTCTTCTAAAAACTAATCTGTCTAAAAGTACATTTAACTTTTCGCTGCCAAAATTACAGCaaaagttaaatgtaattttagaCAGATGCCAAAGAGACGTGATTTTAAATGATCACCGTAGAAAAtctttgcataataaaataattacccTGAGGGCcgagaaaataaattcatCTAAGAGACTGGATGAATTAGCCAGTAGTTTGGCAGTAGTTAGAGCCATCCAaATACCAACGTGTAGCCCGAGGGAGCCCGAGGTTTTAATTGATTTAGTAGAACATTGGATCCAATTACCTAATTGGATCTTGGAAgatctattatatatattagtATTAAAATTGACATTGGAGGTGGAAGAATGGAATCCTCTTACCGATACTGTACCTATTCACACGTGGATTCATCCTTGGTTGCCGttattacgAAATCGCTTAGATACTTTGATTTATCCAATAATACGTAGAAAATTTGGATCTGCGCTAGAAGGTTGGCATCCATCAGACAGATCTGCTAGATTAATGCTGCAACCTTGGGCAGAAGTGTTCTCAAAGGGAGATATGGAATCATTTTTAGTTGAGAACATTATTCCAAAATTGCAAGTAGCCTTATCCGAATTAGTCATAAATCCACACCAACAACACTTGGATCAATGGAATTGGGTATATGAGTGGAAGGACTTGATCCCTGTTCATATCATGGCAGGATtacttgataaaattttttttccaaaatggcTACATATCTTGGCGATTTAGCTCAATAATTCACCTAATTATGATCAAGTTGCAACGTGGTACATGGGTTGGAAAGGAATGTTGAATGACAAATTACTGGCGGAACCAATAATAAAAGATCACTTTAAGAGAGCGCTGGAGATAATGAACAGGCTGTCACTAGGCCACAAAGTGTCCTTATGGCTAAATTGTGACGGAGGAAATTAG
- Protein Sequence
- MSENEVESFEIPEYDLDKEFNTARPRRKLSRKQQMLGIWADDSNEDELSARPSFKTFSKDPKNYMAPVNFVAGGSQQAGKLKEKEDEDDEEDKEEREAKHSSSSSADQRPNSESRTPLNLDSLRKKRNKVEVKRLQGVCTSQLQSSWEVQGIGTKLLLQMGFKPGLGLGKHLQGISAPVEARPRKGRGAIGAYGPEKKIKEEKKKDVINKSNLSKSTLLKTNLSKSTFNFSLPKLQQKLNVILDRCQRDVILNDHRRKSLHNKIITLRAEKINSSKRLDELASSLAVVRAIQIPTCSPREPEVLIDLVEHWIQLPNWILEDLLYILVLKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKFGSALEGWHPSDRSARLMLQPWAEVFSKGDMESFLVENIIPKLQVALSELVINPHQQHLDQWNWVYEWKDLIPVHIMAGLLDKIFFPKWLHILAI*LNNSPNYDQVATWYMGWKGMLNDKLLAEPIIKDHFKRALEIMNRLSLGHKVSLWLNCDGGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -