Veme007094.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- bab2_1
- Assembly
- GCA_000949405.1
- Location
- NW:3523039-3590090[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-12 7.5e-10 38.0 0.0 1 39 383 422 383 426 0.90 2 4 6.2e-13 4.6e-10 38.6 0.1 2 39 438 475 437 478 0.94 3 4 9e-19 6.7e-16 57.3 0.0 1 45 492 537 492 537 0.97 4 4 1.6e-18 1.2e-15 56.5 0.1 1 42 544 586 544 587 0.97
Sequence Information
- Coding Sequence
- ATGGTGAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAATATGACGTCGGTGTTCCACCAGCTCCTGCAGACCGAGTCCTTCGTCGACGTCACCCTGGCGTGCAACGAGGCCTCGTTAAAGGCGCACAAGGTGGTGCTGTCGGCCTGCAGCTCCTACTTCCAGAACCTCCTGCTGTCGAACCCCTGCAAACACCCGACGATCATCATGCCGCAGGACGTCTGCTTCAGCGACCTCAAGTTCATCATAGAGTTCGTCTACCGCGGCGAGATCGACGTTTCGCAAGCGGAGCTTCAGTCGCTCTTGAAGACGGCCGACCAGCTGAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAACAGAGACGGTCCGCCACCCGTGAGCCTAAGCTCGCCACCGAGGGAGTCCAGCACCCCGAGGTTGAACTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGAGACCCAGAATCGAGCGGCCCACGTTCGAGCAGCGCGCCACCGATCCGAGACATTACGATCGCTACAAAGAGGAGGAGGCCAACAACGATTACAGCCGCGATAACAAAGAGAACCATCGGGACTGGCAGGCTGAAGATGAAGAGTGCACGGAgacagcaacagcagcagtagCACTGGAAACTTGCCAAcgtaataataacaacaacaacaataacAACGGTAACGGCACGAGTAACAACGGTGACATGTTCTGTCACACAGGGCTAGGGCACTACGGCCACCATCCGGATCCCGGAGAGGTCGATTTGCCCCCCGAGACCCAACCCACCCCACCCAGCGCCACCCTAGTCGGCACCACCATCACCCACCTGAGGGATCCGGATCATCATTCTACAGAGATTCAGAATTGCGACAGCGTCAAGATCAAGTTCGAGACGCTGCACACGATGGACTCCTCAGACACGATCGACATAGACAGTCACATGTCGGATCGGGCGAGTGTGAGCTCGAAGAACGCCGCCGACAGCGACAACATGATGATGATAACACCGGAGCTGCTAGGGCTGATGCCGTCGGGAAGCTCCGGCCAGTCGGACTCGGGCGAGAACAATTCGAGGGGGCACAGCGGACAGTCCAGCTCGCATCATCACGGCTCCAAGTCTTGGACGCAAGAGGACATGGACGCGGCTTTGGAGGCGCTAAGAAATCACAACATGAGCCTGACGAAAGCTTCAGCAACATTCGGTATTCCCTCGACGACTCTGTGGCAACGGGCACATCGATTGGGCATCGACACGCCGAAGAAAGACGGCCCCACGAAGTCCTGGAGCGACGAGAGCTTGAACAACGCTTTAGAAGCTCTGCGCACCGGCTCCATTTCGGCTAACAAGGCGTCCAAAGCGTACGGCATACCTTCCAGTACATTGTACAAGATCGCCAGGAGAGAAGGTATCAGACTGGCCGCGCCGTTCAACGCGAGTCCCACTACGTGGACGCCCGCTGATTTGGATCGCGCCCTAGAAGCAATAAGGTCTGGTCAGACCTCCGTGCAGAGAGCGTCGACGGAATTCGGTATACCTACGGGGACTTTGTACGGAAGATGCAAGCGGGAAGGAATCGAGCTTAGCAGGAGCAATCCCACGCCGTGGAGCGAGGACGCTATGACTGAAGCTCTCGAGGCCGTCAGATTAGGGCACATGAGCATAAATCAAGCGGCGATCCACTACAATCTGCCGTACTCGTCACTGTACGGGCGCTTCAAGAGAGGCAAATACGAGGAGCCCGTCGTCGGCGACATCTCGCAGGACGGCACCAGTCCACATTTCCATCAGAGCCCCAACCAGAATCACTCGTCCGCCCTTCCAGATCAAATGCCTTATCCGGGCAGCTGA
- Protein Sequence
- MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTESFVDVTLACNEASLKAHKVVLSACSSYFQNLLLSNPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPENRDGPPPVSLSSPPRESSTPRLNYTKLKKHHQRYKRPRIERPTFEQRATDPRHYDRYKEEEANNDYSRDNKENHRDWQAEDEECTETATAAVALETCQRNNNNNNNNNGNGTSNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSGQSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDISQDGTSPHFHQSPNQNHSSALPDQMPYPGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00279879;
- 90% Identity
- iTF_01520386;
- 80% Identity
- iTF_01520386;