Vcin032065.1
Basic Information
- Insect
- Villa cingulata
- Gene Symbol
- Rel
- Assembly
- GCA_951394055.1
- Location
- OX596023.1:16024653-16034100[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-48 1.1e-43 150.4 0.4 2 168 320 502 319 503 0.92 2 3 3 4.3e+04 -4.5 0.6 112 144 741 773 731 779 0.70 3 3 0.72 1e+04 -2.5 0.1 70 122 944 995 933 1013 0.57
Sequence Information
- Coding Sequence
- ATGAAAGGAAGAAATATAACGTCTGATAATTTTTTCACTACGTACGATCTTGCCATCGAGCTTTTGAAAAAGAGGAACACTGTTGTGGGAACAGTACGGCAAAATAAGACCTTCCTGCCACTTGTCAACAAGAAAGATAAACGTCAGAAAGATGTATTGAGCAGTGAGTTCTATTTTACGGACAAGGTGACTGTGGTACAATACGtcccaaaaaaatataaaattgtgacTGCGTTAAGTACTTTCCATCATGACGATAAAACCGCAAACGATGGCAAAAAGTTACcagaaataatttctttttataatcaAACCAAAGGGGGTGTTGACACTTTAGATCAATTAGTTAACACATACACGTTAAAGAGGAAAACAAATCGTTGGCCTTTTGCTCTCTTTGCAAACATGATTGATATTTCAGCCATCAATGCGTATGTGCTTTGGACAGAAACTGATCCGAATTGGAACAAAAATAAACTGTTTAGAAGAAGATTATTTTTAGAACAACTGGGAGAATACCTCGTAGATAAGGAAATAATGCAAAGACCTTATCTTCCAAGGAGTGAAGCATCTATCTCAGTAATGACTCAAAAAAATGCAGCACAGTCAACAAATAGTACACCTTTATCTGAACATCAatcaaaaaaacgaaaaatttcaaaaggtGCAAGATGTGAAATGTGTTCAAAAAGAGATCatagTGGCTATTCAGATGCAGCATCACCGGGATCATCGTCCACAAGCTCAAGAGCTATGCCATCACCATTatcaaatattaatCGTCAAACATCAAAAGTTGTAATTAGTGATAATGATTATAATTATGATGCAAAAATTccatcaaaaattataaataaatcaaattatgcCAATTATATATCATTACCACATCAAATTGATTCATTGCATACAATTAATCAAATTGGTGATgataaattgtttgtaaaacCTGAATTAATAATACGTGAACAGCCAGTTGATAAATTTCGTTTTCGTTATAAATCTGAAATGCATGGTACACATGGATCATTAATGGGTGAGAATAgtgaaaaatctaaaaaaacgTATCCAACAGTGGAATTGATTAATTATCATGGTAAAGCATTAATACGATGCAGTTTATATCAGAATGATAAAATAAGACATTTACCACATTCACATAAATTGGTTGTTCGAAATGGTGAAGAAGATGTTTGTGATCCACATGATTTATATGTGTCACCGGATGATGGTTTTAAAGCTGtTTTTCAAGGAATGGGAATTATTCATACTGCAAAAAAATTTATCGTTGAAGAATTGATAtcgaaaaaaatcaaagaaaaagaatttgaaTTAACACGGGATTTAACACAACGTGAAATAACCcaaataaaaataaatgctgATAGAGAAGCAAAAGATATGAATTTAAATCAAGTATGTTTAGCATTTCATGCATATAAAGTAAATATTGATGGGTATCTAACGAAATTATGTGAACCAGTATTTTCAAGACCAATTAATAACATGAaAAGTGCTTTAACTGGTGAATTAAAAATTGTACGATTGAGTGCATTTGTCAGTGGAGCATCTGGAGGTgaagatttatttttgttagtcGAAAAAGTTGGAAAAAaaaatattaaagttAGATTTTATGAAATTGATTCGAATGATGATGAAGTATGGGAAGATTGGGGGCAGTTTTGTGAAGCTGATGTACATCATCAATATGCTATCGCATTACGAACACCAccatataaagataaaaatattgaaaaagatGTAGAAGTTTTTATACAGTTGGAACGTCCAAGCGATGGTATGCGTAGTGAACCATTGCCATTTAAATATAAGCCAAGTGATTTTACAATATCACGTAAACGAGCAAAAAGATCAAATTCACCAATTTCatgtggtggtggtggtggtgttggtGGTTTAAGTTCACTCGAATTACCAGAAACAATATTAAATCCAAATGAATTTTCGAAACAACACGGAGAACAGCAGCAGACACCACAGTATAATACATTAACGTTAAGTGAagaattcaataaaaatgaattattaaatgATTTAACAAGAGGCAGTAGACAAGATTCTGGTAGCTGTAGTGTACCAGATGAATTCTTGAATGAATGCTTTATGGATTCGGCAgAATTAATGAAATTGATGGATCCAAATATTTTTACTGATTGTAGTCAATTAAAAACTGATGGCGTTGAAAATGTacaatcaaattcaaattcattagaaaataataaagaaaatataataattgataataatgatacaattgataaaaataatttaattaaattaaaattacaacatcaacaaaaacaaaaattcaaattatctgaacgatattgtaaatattttaaaaggatCTCATCAATATTACGAATGTACAGTACTTATACGGAAGGagatgatataaaaaaaaaagttgaagaaATATTCCTTGAAGCAAGTCAAAATGGAGATTTAATACAATGCGCAATTCAAGATGGTCATCCAGAATTTGTACCAAAAATGTTGAAATGGATTAAAAGGATGAAAATACAGAATGTATTAAATTATCGGAATGAATACAATCATACATGCTTACATATTGCATGTTTATTTGATAGACCAGAATATATTGGTGAATTATTACAGCTGgGAGTTGATCCAAATTCACCAGATATAAATGGTAATACACCATTACATATTGCCGTCGAAAATAATCTAATGATGTGtgttacaaaaatattacaaaaatcaaatatttcattaaatacaaatttagcTAATTATGATGGTCTAACACCATTACATTTGGCAATaatcaaaaaaaattttcaacttgtaagaaaattaattgaagatGGTCAGGCATCTGTTAAATTGAGTGTATCGAAAAATGGTTATCATCCATTGCATTTAGCTATTCAGCaaaatgatgaagaaattgttaaatatttaattgaaaaaacaacagttaatttaaatgaacaaaatttaaatggtGATACACCATTAAAATTAGCAATGGCGATGAATTTAGATACAATTGCTGATTTATTAGTAAGAAATGGTGGTAGAGTTGAAAACGAAATATCAAGTCCGtcaAATTATGaatcaccatcatcatcttTATCGTCAATGTCAATGTCAGCAGCAACAAATTTGACTACAATTGATTgtgattttgaaaataaattgataaaagaaGATGAAAGCTCATCATTATCATCTGATGATGATACTTATTACGAATTAAGAatagatgatgataatgataattatgCAAATGATAATATTGttcataatgataataatgttgataatgataatattgttgataatggtgataatattgatattgaaaattatgaaaataaaaatatattattcgaTGATATGTGCATATCACAATTATCAATGCTAttcaatgataatgatgattggAAATATTTGGCTGAATCATTAAAATTACGTGCATACACATGTTTATGGTCATCAACTGAAAATCCAACAAAATCAATGTTCGAACATATAAATCGTTATGAGCGTGGTAAAATGACACTTCAAGATATTATTGATgcttgtataaaattaaaaataattgaagctgtaaattgtattgaaaaaatgatgaaaaggCAAATAACGACGGTATAA
- Protein Sequence
- MKGRNITSDNFFTTYDLAIELLKKRNTVVGTVRQNKTFLPLVNKKDKRQKDVLSSEFYFTDKVTVVQYVPKKYKIVTALSTFHHDDKTANDGKKLPEIISFYNQTKGGVDTLDQLVNTYTLKRKTNRWPFALFANMIDISAINAYVLWTETDPNWNKNKLFRRRLFLEQLGEYLVDKEIMQRPYLPRSEASISVMTQKNAAQSTNSTPLSEHQSKKRKISKGARCEMCSKRDHSGYSDAASPGSSSTSSRAMPSPLSNINRQTSKVVISDNDYNYDAKIPSKIINKSNYANYISLPHQIDSLHTINQIGDDKLFVKPELIIREQPVDKFRFRYKSEMHGTHGSLMGENSEKSKKTYPTVELINYHGKALIRCSLYQNDKIRHLPHSHKLVVRNGEEDVCDPHDLYVSPDDGFKAVFQGMGIIHTAKKFIVEELISKKIKEKEFELTRDLTQREITQIKINADREAKDMNLNQVCLAFHAYKVNIDGYLTKLCEPVFSRPINNMKSALTGELKIVRLSAFVSGASGGEDLFLLVEKVGKKNIKVRFYEIDSNDDEVWEDWGQFCEADVHHQYAIALRTPPYKDKNIEKDVEVFIQLERPSDGMRSEPLPFKYKPSDFTISRKRAKRSNSPISCGGGGGVGGLSSLELPETILNPNEFSKQHGEQQQTPQYNTLTLSEEFNKNELLNDLTRGSRQDSGSCSVPDEFLNECFMDSAELMKLMDPNIFTDCSQLKTDGVENVQSNSNSLENNKENIIIDNNDTIDKNNLIKLKLQHQQKQKFKLSERYCKYFKRISSILRMYSTYTEGDDIKKKVEEIFLEASQNGDLIQCAIQDGHPEFVPKMLKWIKRMKIQNVLNYRNEYNHTCLHIACLFDRPEYIGELLQLGVDPNSPDINGNTPLHIAVENNLMMCVTKILQKSNISLNTNLANYDGLTPLHLAIIKKNFQLVRKLIEDGQASVKLSVSKNGYHPLHLAIQQNDEEIVKYLIEKTTVNLNEQNLNGDTPLKLAMAMNLDTIADLLVRNGGRVENEISSPSNYESPSSSLSSMSMSAATNLTTIDCDFENKLIKEDESSSLSSDDDTYYELRIDDDNDNYANDNIVHNDNNVDNDNIVDNGDNIDIENYENKNILFDDMCISQLSMLFNDNDDWKYLAESLKLRAYTCLWSSTENPTKSMFEHINRYERGKMTLQDIIDACIKLKIIEAVNCIEKMMKRQITTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -