Basic Information

Gene Symbol
ZFHX3
Assembly
GCA_036346205.1
Location
JARFJB010000255.1:3779128-3792815[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.028 22 9.2 2.2 2 22 60 80 60 83 0.91
2 13 0.079 63 7.8 1.6 1 23 95 120 95 120 0.91
3 13 0.0036 2.9 12.0 1.6 1 23 138 160 138 160 0.97
4 13 0.0021 1.7 12.7 0.5 2 23 167 189 166 189 0.94
5 13 0.00021 0.17 15.9 3.1 1 23 296 320 296 320 0.92
6 13 0.0062 4.9 11.3 0.6 1 22 340 361 340 364 0.89
7 13 0.0012 0.98 13.5 0.2 1 23 411 435 411 435 0.93
8 13 0.0011 0.91 13.6 0.1 2 21 498 517 497 518 0.94
9 13 0.37 2.9e+02 5.7 2.5 2 19 624 641 623 646 0.90
10 13 0.00013 0.11 16.5 2.5 1 23 1221 1243 1221 1243 0.99
11 13 0.00043 0.34 14.9 0.3 1 23 1334 1356 1334 1356 0.98
12 13 0.034 27 8.9 0.2 2 23 1501 1523 1500 1523 0.92
13 13 0.65 5.2e+02 4.9 2.9 2 23 1779 1802 1779 1802 0.89

Sequence Information

Coding Sequence
ATGTTAGTAGATCAAAGCCATTGGTTAAATCAAACACCACCAAATCAAATGATATCGCCGAATTCAGTTTCTTCCAAAGATTATAATAAATTAGATAGAAGCGATACAAACCATTTGGAGGGTGAACGTGATATAATGTCACCGAACAGTGACGAAAATACCGATATCGAATCGGAAAAATGTGGTACTTGttataagaactttaaaaatattgacgAATTGTGTTCACATCAAAATGAAACGGgtcatttagaaataaaacagaCGCCTAGCGGCCCTGGGTATATGTGCTGGAAAAAAGGCTGTAATCAGTTTTTTCCAACAGCGCATACGTTACAAATGCATTTTAAAGAAATTCATGCCAAAAATTCTATAACGCATATGTCGGTATCTGAGAAACACGTGTACAAATATAGATGCAATCAATGCTCATTAGCCTTTAAGACTTTAGAAAAATTACAGTTACATTCTCAATATCACATTATAAGAGACGCTACTAAGTGCGTTTTGTGTGGGAGAAGTTTTCGTTCAGTTGTAGCGCTTCATAAGCACGTGGAAAGTGTGCACTCAGAATTGACCGATGAAGAATTAGCCGCTTATAAGCAAAGTTTAATGAATAACCCACTTTTGTTGGCCGGATTACAAGGCCAAGTTTTAGATAGTTCTACAAACGATATTTTAAAGAAGGAGTCGTTGCGCTGTGATGATACCGAATCTCTCGATTGTGACGACAGTAAAGATCTTAATACTAGTCATGACGATAGCAATCAAAATGATGGCGATAATTCGGACgatagtattgtttataaagatCAACAATTCTTGGAAGATTACCTGAATAGTCAGGCAATGGCGGAGGATAGTTACAATGACCCTAATAGAAAATACAAATGCCACCGGTGCAAGGTAGCTTTTACAAGACAAAGTTATTTAACCGCCCACAATAAAACCCTTCTGCATAGAAAAGGCGAGAAACTAAGCTACCCCATGGAGAAATACCTGGATCCGAATCGACCTTACAAATGTGATGTTTGCAAAGAAAGTTTTACGCAAAAAAATATACTGTTAGTGCATTATAATTCGGTTAGTCATTTACATAAGTTAAAAAGAGCGATGCAAGAacaacagaataataataataaccctcCTGTATCACCGATAATAAGCCAACCGCAGAATCTTACATTAACACCTAAGAGTACGTCGTCGGACGAAGACGATAAAAAGAGGTATCGTTGCAATATATGCAAAGTGGCTTATACGCAGGGTAGCACCTTGGATATTCATATGCGTAGTGtattgcatcaaactcgtgcgaGTAAATTGCAAGATTTAGCGTTAGCGGGACAGATTGACCTTTCGAAGCCCTTAATAGAGCAGCCCGAAGCCATGCAGTCTCCTAAACAGACAAGTCCTGCACCCGGTAGTGGGGAGAAGGCGTCTCCCACCCCAATGTCACCGGGGCCCGGTGCAGGTAGTCAAGGGATGATGAGCTGCCCTAAGTGTGGAGCCCTATTTAGTTCGCAAGACCAGTTAAGCGCACACCAGCAGCTGTGTTGTATGTTTACAGCACCGATGGCTATCTTTCAGGCTCAAGAGCCAGGACAAGCGAAGAGCCCGCCACCGGGAGAACAGGACCTCGTCAGCCGCCTTCATCTATCGAAGAAAACCAGTTCGCACATGTACAAACATTTACTCGAAAGTTTCGGATTTGATCTTGTGATGCAATATAACGAAAGCCATCAGAGACGCCAAAGACAACGGGAAGCTGAGGAGAAATTAGCGACGCCGCCCCCTGCCGATGATGAGACGGATGCACCCAGAGCCGAGGAGGACGCAGAAAACAACTTACCTGAAGTAAGTAGATCTACGTGCCAACATTGCAATAAAGAATTCTCTAGTGTTTGGGTGTTAAAGTCTCACTGTGAAGAAGTACATAAAGATTTAGTGCCACTAGAATTCTTAGAAAAGTATGCTCAACAGTTCAAGAACGAATACGAAAAGAAATCGGTGGTCGTGACGGCAGCAACATCCTCTACGTTAAACAGCAACCCGCGGGTCACAACCCCTGGTGCGCCGAGTACATCAACCCCGACAAATACAGAAACAACTCCCGAGAAAGAGGACGAATCGAAAGAAGCCCTTCACGCTAAGCTCAATTTAAATACTCCTCCTGAAGCAACATCAACGGCACCGTCGACGCCGACGTCCTCGTCAACACCTGCTAGTAGTACAGATTCGGTGCCCGCTAATATACAAGCGATGATTGCTCAAAGTATGGCACAAAATCCAGTGACTTTTGCACAACAAATGTCCGAGATGCAAGCAGCGCTTAATGTTATGCAACTTCAACAGTTCAATTTTAACCCGATGATGCAAATTATGGGTATGGGTTTACCACTTGGACTTAATGCGATTGCAGCTTTGAATTTACAACCGCCCCTTGTACCACTTATGATGCCACCACCACCTTATGATCCTATGACACAATTTGCACCACAAGATCAACAAGCCATTATTGCTAAACAACAAGCAATGATGCAACAACAGGCggcCGCTAACGCTGCAGCAAATCAAAAACGTGCAAGGACGAGAATAACAGACGAACAACTAAAAATTTTACGTTCACATTTCGATATTAACAACTCCCCATCCGAAGATCAAATACAAGATATGGCCTCTCAAAGTGGCTTACCACCGAAAGTTATTAAACATTGGTTTAGAAATACTTTATTTAAAGAGCGACAACGGAATAAAGATAGcccttataattttaataatccacCGTCGACAACACTAAATCTCGAGGAATACGAGAAAACAGGTGAAGCTAAAGTTATACCATTAAATAGCTCAGGCAGTAGTACGGATGACAATTCAAAAAACTCGAAAGGTTCGCCCCCTCCAGGCGATATAATTAAAACGGAGCCAAAAGAAGAATTAGACGAACATCCTAAATATCACATTGAGGACAAACCACCCGAACCAATCGATGAAAAACCTAACATTTTTCACATGCATCAGCAGCTGCATCATCATCCACCACCTAGTCCCGTAACGTCAATCTGCAATtcggaaatacaaaatttatcacAAGCGACAAGTCCGAATATACCAAACAATATAACGCTTACCTCAATAATTGCCTCGCAACTAGGCGATACCTTAACAACCACAGCGCCTAATACCTTAAATCTAACCACAGTAAGCAATCATCCCTTAGCAAGTCCTATGCTACCTCCTACCAAACTAAGTCAACAAAATTTCGCTAGTCCTAAtaaccttcaaaatattttaccaaTGACTCCCAACCGATGTATCAGTCCAAACCGGGGGGAATTTATGGGAACTGGAGGAAGTAGCAGCGGCAGTAACAGCTCAGGTGGAACTACCGGCAAAAGAGCGAACCGAACTAGATTCACCGATTAccaaattaaagttttacaagaattttttgaaaataacgcTTACCCTAAAGACGATGATCTCGAATACCTCTCCAAACTTCTGAATTTAAGTCCACGCGTTATTGTGGTATGGTTTCAAAACGCAAGACAAAAAGCGCGTAAGGTTTACGAAAATCAACCCGCAGTAGATCCTGCTCCAGGCCTTACTGAAGACGGTGGAGCTAATCGCTTTCAAAGAACACCTGGCTTGAATTATCAATGCAAAAAATGTTTGTTGGTATTTCAAAGATACTACGAATTAATCCGTCATCAAAAAACTCACTGTTTTAAAGAAGAAGACGCTAAACGGTCGGCGCAAGCACAAGCAGCAGCAGCTCAAATCGCAGCCGTTCTAAGCTCGGAAGATTCCAACTCGAGCACAACAGTCGAGCAAAATCAACAGCAACCACAAATGACGCACAATCCACAAATTCCAATGCCCTCACAAAGTCCAATACAACCAAATCCCCCAACAACACCTAACCCATCGGTCGTAAATTTTCCCACATCACCAATTCCATCATCAACTCCCACCGATTCTAAAGAAGGTTCCTATCAGTGCGATAAATGCAACCTTGTATTTCCCAGATTCGACTTATGGCGAGAACATCAACTAGTACACATTATGAATCCAAACCTTTTTCCATCATACCCTCCAGACTCTCCCTTTGGCATACTCCAACAGCACGCGCAATTACAACAACTCAACGCTAACCTAAACGATTTGGGGAATAACTCAACAAACTCCATTCAACATCCCCTCATAAACATGCTCAATAACGTTGCAGTCCAAAAACGAAAATTTGATGACGATACCGAAAGCGACATATCCGATCAACCGAAAGATAAGCGATTACGAACAACAATTTTACCAGAGCAGCTAGATtatttataccaaaaatatcAAATAGAAAGCAACCCATCTAGAAAAATGTTAGAGAATATTGCTAGAGAGGTTGGTTTAAAAAAAAGAGTGGTGCAAGTGTGGTTTCAGAATACGAGAGCGCGTGAACGGAAAGGACAATTTCGAGCACACGCTCAAGTTATAAATAAAAGATGTCCATTCTGCCCTGCTTTGTTTAAAGTTAAATCTGCTTTAGAATCTCATTTAACTGCGAAACACTCTGATCAGTGTGCTCGAGGTGAAATTAATATCGATGCGTTACCGGATGAAGAAGTGAGTTTAGAATCGGCTCCTAGCTTTACTTCGACTGGTGAGAAGTGTCAGCAAGGTCAGGGGATACTTCCTCCGCTGTTTCCTCCTATGAATGCGGAGATTGAAAGTTCGATTAAGAAGTATTATGAGGAGAGTATGAAAAGGTACATTAGTGAAATGCAAGCACACGCGGCGTCTACTAATGGTGATAAGAGTGAGATTAGGATCCCGAAGGAAGAAGGTGAGATTCCTTTGGATTTATCGAAACCGGTGGATTTATCGAGGCCGATGAAAGTATCGCTTGACCATGAGAAAAGTCTTTGTGATCCAGGTCCGCTTACTGATTTAAGTGAGAGGTCTTTATGTGATGAAAGGAGTGATTCGATGTCGGAAACGACCGAGTTTTTTGATGATGAGAGTAATCCAACATCACCTGCTAGTAGTACGCAAAGTACGCAGCAGCGGATGGGTTCATCTATGCAGCATGGTATGGGTTCGAAAAGGTATCGAACTCAGATGTCATCTGTTCAAGTGAAAGTGATGAAGTCGTTATTTCATGATTATCGAACACCTACAATGGCGGAGTGTGAAATGTTAGGTAGAGAAATTGGTTTGCCAAAACGTGTGATACAGGTCTGGTTTCAAAATGCAAGAGCGAAGGAGAAGAAGAATAAGATTGCGTTGCAAAAAGTTTTGGGATCGGCCGATACTGATAATCCTAAACTGCCTGAGGAGTGCAAATTTTGTTCGTTTAAGTATTCGCATAAGTATTCAATTCAAGATCATATATTTACGAAAGGGCATATCGCTAATGTTCGAATGCATTTAGAGAGTGTTAATAAGGATGGTTCTGGGAGTGATGGGGAGTTTACGATTCCACCGATACCAGGCGCCTCGGGAGTTGTGTCCGCGGATTCCACCACCAACCCAACGGTTCAGGCGCACAACAACAACACCCACCTTCAGCTCCTCCAGATGGCCAGCATGCAGATGGCAGCCTCCGTCAAAGGGGAGAAGGAAAATCAGGACGCCATCTTCCAGCAGCTCTACTCGCTTGGCAACAACAGTTCCTATCCACCCCAAAATCAATTTTTACACAATTCCATGTTCAGTGCGAATGGtaagtttattattactattaattaa
Protein Sequence
MLVDQSHWLNQTPPNQMISPNSVSSKDYNKLDRSDTNHLEGERDIMSPNSDENTDIESEKCGTCYKNFKNIDELCSHQNETGHLEIKQTPSGPGYMCWKKGCNQFFPTAHTLQMHFKEIHAKNSITHMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHIIRDATKCVLCGRSFRSVVALHKHVESVHSELTDEELAAYKQSLMNNPLLLAGLQGQVLDSSTNDILKKESLRCDDTESLDCDDSKDLNTSHDDSNQNDGDNSDDSIVYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNNPPVSPIISQPQNLTLTPKSTSSDEDDKKRYRCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLALAGQIDLSKPLIEQPEAMQSPKQTSPAPGSGEKASPTPMSPGPGAGSQGMMSCPKCGALFSSQDQLSAHQQLCCMFTAPMAIFQAQEPGQAKSPPPGEQDLVSRLHLSKKTSSHMYKHLLESFGFDLVMQYNESHQRRQRQREAEEKLATPPPADDETDAPRAEEDAENNLPEVSRSTCQHCNKEFSSVWVLKSHCEEVHKDLVPLEFLEKYAQQFKNEYEKKSVVVTAATSSTLNSNPRVTTPGAPSTSTPTNTETTPEKEDESKEALHAKLNLNTPPEATSTAPSTPTSSSTPASSTDSVPANIQAMIAQSMAQNPVTFAQQMSEMQAALNVMQLQQFNFNPMMQIMGMGLPLGLNAIAALNLQPPLVPLMMPPPPYDPMTQFAPQDQQAIIAKQQAMMQQQAAANAAANQKRARTRITDEQLKILRSHFDINNSPSEDQIQDMASQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVIPLNSSGSSTDDNSKNSKGSPPPGDIIKTEPKEELDEHPKYHIEDKPPEPIDEKPNIFHMHQQLHHHPPPSPVTSICNSEIQNLSQATSPNIPNNITLTSIIASQLGDTLTTTAPNTLNLTTVSNHPLASPMLPPTKLSQQNFASPNNLQNILPMTPNRCISPNRGEFMGTGGSSSGSNSSGGTTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKARKVYENQPAVDPAPGLTEDGGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTTVEQNQQQPQMTHNPQIPMPSQSPIQPNPPTTPNPSVVNFPTSPIPSSTPTDSKEGSYQCDKCNLVFPRFDLWREHQLVHIMNPNLFPSYPPDSPFGILQQHAQLQQLNANLNDLGNNSTNSIQHPLINMLNNVAVQKRKFDDDTESDISDQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLTAKHSDQCARGEINIDALPDEEVSLESAPSFTSTGEKCQQGQGILPPLFPPMNAEIESSIKKYYEESMKRYISEMQAHAASTNGDKSEIRIPKEEGEIPLDLSKPVDLSRPMKVSLDHEKSLCDPGPLTDLSERSLCDERSDSMSETTEFFDDESNPTSPASSTQSTQQRMGSSMQHGMGSKRYRTQMSSVQVKVMKSLFHDYRTPTMAECEMLGREIGLPKRVIQVWFQNARAKEKKNKIALQKVLGSADTDNPKLPEECKFCSFKYSHKYSIQDHIFTKGHIANVRMHLESVNKDGSGSDGEFTIPPIPGASGVVSADSTTNPTVQAHNNNTHLQLLQMASMQMAASVKGEKENQDAIFQQLYSLGNNSSYPPQNQFLHNSMFSANGKFIITIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01253068;
90% Identity
iTF_01515309;
80% Identity
iTF_01515309;