Vsat047009.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- -
- Assembly
- GCA_036346205.1
- Location
- JARFJB010000708.1:1295661-1297505[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-08 9.7e-06 28.7 0.0 5 37 1 33 1 35 0.95
Sequence Information
- Coding Sequence
- atgagagAAGCCGCAAATAAAGTCCTGACCAAAGAGTTAACCTTACGTCGGGCTGCTGAGATGTACGAATTACCATACACGACTTTACAAAGAAGAGTCTGTTTCTCCAGAGGTGTCATTAAGACACGTGGTGGTCAGCCAGCTTTAGACGAGAATGCTGAAAAGATTTTAGCAGACCGTTTACTGAACTTAGCGAGTCGTGGCTTCGGAATTACACCTAAGGCGGTTCGTAAATATGCCTTTGAATTCGCAGAACgtcaaaaaattaaacacaaatttaacaaagaactAGGAATGGCTGGTCAGGACTGGTTTCATCGCTTTATGGAAACAAATAAGGAGTTAACTATTCGGAAACCAGAAGGATTGTCAAGAGCAAGGATTGACGGCATGAAAAGGAAAAAAGTGGCCGAATTCTTCAAGACTTTGGAGACAGTAGTAGATAAGACCAATTTAAGAGGAAGACCTGAATGCGTGTTCAATGTGGACGAAACGGGGATCCCGCTTAATAATCGACCACCCAACATTATAGCCCAAAAAGGTGCAAAAGATGTTGTCAGTGTGACAAATGTTGAACGAGGCGAAAATGTAACCGTTTTAGCCTGTATGAATGCAACAGGTCAGTACATACCTCCATTTATTCTATTTAAAGGTGTGCGCAAACGAGATGATTTTTTCATCGGTATGCCACCCGGTACtgaaattattatgacagaaaaGGGCTGGGTAAATGAAGAAGCTTTTCAATTATGGTTGCAACATTTTAATCGCTACCGTACCCCAGGAAAAGTTATTCTAATCTTGGATGGACACGCGTCTCACACGAGCTACTCAGTTGTAGATTTATGTGACTCTTTAGACATTGAGCTTGTTCTTCTTCCTCCACACACGTCATATGCTCTACAACCGCTCGATGTATCATTTTTCAAACCACTCAAATCATATTATCATCAACAAGCTACATCATGGCAACATGCACATCCAAATCAAGGGATCACGAAGGTTGCTTTCGGAGGACTTTTCAAAGAGGCTTGGAACCAGGCTGCCACTGTTGGAAATGCTGTAAAAAGCTTTGAAAAGACTGGAATATTTCCATTAAATGCCAATGCGATACCTGACCACAAGTTTATCGGTGAACACGAGTTAGATATTGTGGAGTCCCAAGTAAAATCCTCGAGTACACAACAACCAGAACTAGTTAAAGATATAGCGCCATTGCTATCCACTAGTTCACTACAATCTGATACAGCCCAATCACCCAGCACTTCTGGCGTTATTAAAGAAATTCTTCCATCACCTTTAAAAACACCGCCAGCCGCAATTAAGAAACGTCACAAAATTACAAAACCAATTTTGCATTTGACATCACCCCAGAATAAGATTAATCTTCTAGAAAAAGATGCTATGAAAAAACTTAAGATTGACAAAAAAGCTgtggaaaataagaaaaatactactGATGACAAAGAAAATATGAACAAGAAGAAGAATAAGAATAAAAGAACGCCTAGAATAAAAATCAAAGGTTCATCTGCAAAACAGAGAGATTGGCATTGTATTTACTGCTCAGAACAATTCATTCATCCACCGACAGAGGATTGGATCCAGTGCCATGCATGCGAAGAATGGTGCCACGAAAATGTGCTGATATGGAAGGAAAAAGGCTGTACATATGTGATTTATGTGCTTGTAATTAATATTGAtctcattattcattatttaagttttgttaatgaTTCCAAAGCTTATAGTGTTCAGAACTTTAATTTAGTTTACATGTTAGTTACGATCCCATTGCCAGAATTGGGGCGATTCGGACATTCTCtctttcaagtttttatttaa
- Protein Sequence
- MREAANKVLTKELTLRRAAEMYELPYTTLQRRVCFSRGVIKTRGGQPALDENAEKILADRLLNLASRGFGITPKAVRKYAFEFAERQKIKHKFNKELGMAGQDWFHRFMETNKELTIRKPEGLSRARIDGMKRKKVAEFFKTLETVVDKTNLRGRPECVFNVDETGIPLNNRPPNIIAQKGAKDVVSVTNVERGENVTVLACMNATGQYIPPFILFKGVRKRDDFFIGMPPGTEIIMTEKGWVNEEAFQLWLQHFNRYRTPGKVILILDGHASHTSYSVVDLCDSLDIELVLLPPHTSYALQPLDVSFFKPLKSYYHQQATSWQHAHPNQGITKVAFGGLFKEAWNQAATVGNAVKSFEKTGIFPLNANAIPDHKFIGEHELDIVESQVKSSSTQQPELVKDIAPLLSTSSLQSDTAQSPSTSGVIKEILPSPLKTPPAAIKKRHKITKPILHLTSPQNKINLLEKDAMKKLKIDKKAVENKKNTTDDKENMNKKKNKNKRTPRIKIKGSSAKQRDWHCIYCSEQFIHPPTEDWIQCHACEEWCHENVLIWKEKGCTYVIYVLVINIDLIIHYLSFVNDSKAYSVQNFNLVYMLVTIPLPELGRFGHSLFQVFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01516054; iTF_01209143; iTF_00290616; iTF_00290608; iTF_00290609; iTF_01516696; iTF_00932410; iTF_00932389; iTF_00791132; iTF_01546589; iTF_00795635; iTF_01437900; iTF_00795632; iTF_00795633; iTF_00795634;
- 90% Identity
- iTF_01516696;
- 80% Identity
- -