Tact023477.1
Basic Information
- Insect
- Thymelicus acteon
- Gene Symbol
- -
- Assembly
- GCA_951805285.1
- Location
- OX638230.1:16587085-16588878[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-11 1.4e-08 35.2 0.1 2 37 16 51 15 55 0.95
Sequence Information
- Coding Sequence
- atGGTTCGCACGTACAAAAGAAAGACAAATGCGGGTGAATGGTCCCACGAAAAAATGACAGAGGCCGCAAATAAAGTCCTGGTCAAAGAGTTAACCTTACGTCGGGCTGCTGAGATTTACGAATTACCATATACAAGTTTACAAAGAAGAGTATCTTTCTCCAGAGGTGTCATTAAGACACGTGGTGGACAGCCAGTCTTAGACGAGGATGCTGAACAGATTTTAGCAGATCGTTTACTCCACTTAGCGAGTCGTGGCTTTGGCATTACACCCAAAGCGGTTCGTAAATATGCATTTGAATTCGCAGAACGTCAAAAAATTGATCACAAATTTAACAGAGAAGTAGGAATGGCTGGTCAGGACTGGTTCCATCGCTTTATGGAGAGAAATAAGCAGTTAACTATTCGGAAACCAGAAGGATTGTCAAGAGCAAGGATTGACGGCATGAAAAGGGAAAAAGTGGCTGAATTTTTCAAGACTTTGGAAACAGTAGTAGATAAGACCAATTTAAGAGGAAGACCTGAATGCGTGTATAATGTGGACGAAACGGGGATTCCGCTTAATAATCGACCACCCAATATAATAGCCCAAAAAGGTGCGAAAGATGTTGTTAGCGTAACAAATGTTGAGCGAGGCGAAAATGTGACCGTCTTAGCATGTATGAATGCAACAGGTCAGTACATACCTCCATTTGTTCTGTTTAAAGGCGTGCGCAAACGAGATGATTTTCTCCTTGGTATGCCACCCGGTACTGAAATTGTTATGACAGAAAAAGGCTGGGTAACTGAAGAAGCATTTCAATTATGGTTACAACATTTTAATCGCTACCGTACCCAAGGAAAGGTTATTCTAATCTTGGATGGACACGCGTCTCACACGAGCTACTCAGTGGTAGATCTATGTGACTCTTTAGACATTGAGCTTGTTCTTCTTCCTCCACACACGTCACATGCACTACAACCCCTCGATGTATCGTTTTTTAAACCTCTCAAATCATATTATCATCAACAAGCTACATCATGGCAACATGCACATCCAAGTCAAGGGATTACTAAGGTCGCTTTTGGAGGAATTTTCAAAGAGGCTTGGAACCAGGCTGCCACTGTTGGAAATGCTGTGAAAGGTTTTGAAAAGACTGGAATATTTCCTTTAAATGCCAATGCGATACCTAACCACAAGTTCATCAGTGATCGAGAATTAGATATTATAGAGTCCCAACTGTTCCAAGTGAATTCCACGAGTACACAAATGCAATCACATCAAGAATCCTCAAGTACTGAACCAGTACAGCCAGAAAAAGTTATAGATATAGTGCCGTTGCCATCAACTAGTTCACAACAATCTGAAATAACCCAATCATGCAGCCCTTCTGGAGTTATTAAAGAAATTCTTCCATCACCGTTCAAGACACCACCAGCCCCAACTAGAAAATCTCGTAAAATTACAAAACCAATTTTGCATTTGACATCACCCGAGAGTAAGATTAATCTTTTCGAAAAAGATGCGAAGAAAAAACTTAAGACTGATAAAAAAGCTAtagaaaaagagaaaaagaCTGATGATAAAGAAAAtgtgaagaagaagaaaaataaacgaACACCTGGAATAAAAGTCAAAGGTTCATCTGCGAAACAGAGAGATTGGTATTGTATTTACTGCTCCGAAAAATTTATTCATCCACCGTCCGAGGATTGGATTCAGTGTCATGCATGCCAAGAATGGTGCCACGAAAAATGTGCTGATATGGGAGGCAAAAAAGGCCCGTATATATGTGATTTATgtgctagtaaataa
- Protein Sequence
- MVRTYKRKTNAGEWSHEKMTEAANKVLVKELTLRRAAEIYELPYTSLQRRVSFSRGVIKTRGGQPVLDEDAEQILADRLLHLASRGFGITPKAVRKYAFEFAERQKIDHKFNREVGMAGQDWFHRFMERNKQLTIRKPEGLSRARIDGMKREKVAEFFKTLETVVDKTNLRGRPECVYNVDETGIPLNNRPPNIIAQKGAKDVVSVTNVERGENVTVLACMNATGQYIPPFVLFKGVRKRDDFLLGMPPGTEIVMTEKGWVTEEAFQLWLQHFNRYRTQGKVILILDGHASHTSYSVVDLCDSLDIELVLLPPHTSHALQPLDVSFFKPLKSYYHQQATSWQHAHPSQGITKVAFGGIFKEAWNQAATVGNAVKGFEKTGIFPLNANAIPNHKFISDRELDIIESQLFQVNSTSTQMQSHQESSSTEPVQPEKVIDIVPLPSTSSQQSEITQSCSPSGVIKEILPSPFKTPPAPTRKSRKITKPILHLTSPESKINLFEKDAKKKLKTDKKAIEKEKKTDDKENVKKKKNKRTPGIKVKGSSAKQRDWYCIYCSEKFIHPPSEDWIQCHACQEWCHEKCADMGGKKGPYICDLCASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01516525;
- 90% Identity
- iTF_00795632; iTF_00795633; iTF_00795634; iTF_00795635;
- 80% Identity
- -