Vsat079998.1
Basic Information
- Insect
- Vesta saturnalis
- Gene Symbol
- JRK_2
- Assembly
- GCA_036346205.1
- Location
- JARFJB010001262.1:811540-812583[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-09 2.1e-07 34.1 0.1 2 37 16 51 15 56 0.93
Sequence Information
- Coding Sequence
- ATGGTACAAAAATACGCAAGAAAGACAAATCGTCAAAATTGGTCTAAAGAGTCAATGAAAGAAGCAGTACAGGCGATTAATGAGGGTACCATGGGTTATAAAAAAGCAGCGCAGCAATTTAAGGTGCCTCAAACCACATTAGAACGTTATGTTGCAAAAGCAAAAAGAGATGTGGGGTCAAAGTTTAACATAGCGCAATTAGGAAGTGCCAGAAATGTGTTTACCGAAGCTCAAGAGTTAGAGATTGTGAAATATGTAAAAGACATGGAATCAAGATTATTCGGCTTTACAATGAGAGAgttaagaaaatttgtttatcaattGGCGGTCGTAAACGGTGTTGCAAACAGGTTTAGTAAAGACACTGAGATGGCCGGTCCTGACTGGACGGAACATTTTCTTCGAAAACACCCTACCATAGCCCTAAGAAAACCAGAAGCCACATCAGGAGCTAGAGCAATGGGCTTCAATAAGGTTGCTGTGAATCAGTTCTTTGGTTTGCTTACAAGTATTATCGATAAGTATCAACTAACTGCAGAGAAGATTTTCAATTGTGATGAGACAGGTATCACTGTAAATCCAAAGGGACATTCGAGGATATTAGCACTTAAAGCAAAACGCCAAGTAGGAGTTCTCACATCTGCAGAGAGGGGGGAAACCGTGACTGCTGAAATTTGTTGCTCAGCTTCGGGAAGTTATGTTTCTCCTTGCCTTATTTTTCCCAGAAAAAGAAAACGCCCTGAATTTGAAATTGGTTTGCCACCTGGTTCTATGGTTGAAACAAGTGATTCTGGTTGGGTGACTGGAGATATTTTTTTCAGatggtttaaaaaatttgttcaattttccgGGGCTTCAAAAGATAACGCCGTACTTTTAATTTGTGATGGCCATGCCAGTCATACAAAAAATCTTGACCTTATTAATTATGCCCGAGAAAATGGAGTGATTCTGCTTTGTTTACCACCGCATTGTTCGCACAAGTTGCAACCTCTGGACGTCAGCTTTATGAACCTCTCAGCAGCTACTACGAAAATGAAGTAA
- Protein Sequence
- MVQKYARKTNRQNWSKESMKEAVQAINEGTMGYKKAAQQFKVPQTTLERYVAKAKRDVGSKFNIAQLGSARNVFTEAQELEIVKYVKDMESRLFGFTMRELRKFVYQLAVVNGVANRFSKDTEMAGPDWTEHFLRKHPTIALRKPEATSGARAMGFNKVAVNQFFGLLTSIIDKYQLTAEKIFNCDETGITVNPKGHSRILALKAKRQVGVLTSAERGETVTAEICCSASGSYVSPCLIFPRKRKRPEFEIGLPPGSMVETSDSGWVTGDIFFRWFKKFVQFSGASKDNAVLLICDGHASHTKNLDLINYARENGVILLCLPPHCSHKLQPLDVSFMNLSAATTKMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01128328; iTF_00195914; iTF_00195910; iTF_00195913; iTF_00195947; iTF_01105588; iTF_01105594;
- 90% Identity
- iTF_01105594;
- 80% Identity
- -