Vvul011821.1
Basic Information
- Insect
- Vespula vulgaris
- Gene Symbol
- retn
- Assembly
- GCA_905475345.1
- Location
- FR997684.1:3540480-3672366[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 1.2e+04 -3.9 0.1 68 82 243 257 235 257 0.66 2 2 6e-26 1e-22 79.7 0.0 2 89 264 349 263 349 0.96
Sequence Information
- Coding Sequence
- ATGGAGATGAGCGACGATTATCAGGACATGGTTAATCCAGGTGGTGGCGTTGCTATGGGGAATATACAACCTATGGGACATCATCGGCACACGCCTGAAAGTCCTTTGTCCCATCAAGAAGATGATTTATCAGATCCCGATTTACAGGATGAAGAAAGTGGAGAAGAGTTACCACAGCAGCCACACGCCGGACACAGTACACATCAGAACCCATCGGATCCATCGTCCATATCGACCAACACAACTCCCACACCTTTGACAAATCTCAACACTCTTATGAATACACATCATCCACATTTTCTAGCCAAGTTAAAAATGGAGGCCGATGTCGATATCTTAAACAACAAAAGTGGATTGGAAGCATTACAAGCGGCAATGGGTAGCGGCGGTTTTAGTTTACCATTTTCATTTCCTCCAACATTTTTACCACCTCAACATCATGGACAAAATAATCACGCGCAAAGTGGATTGGTACCATCTACGTCATCGGCAGCTGCAGCAGCAGCAGCAGTAGTTGCTCTAGGATCTGGATTAGGAGCAGGATTAGGACCACCAGGACTAAATACGGCAAGCGGAAGCAACATTAATCAGGCTACGTCATCGGCAAGTTCACATTCGAGCGAATCATCGCAGTGCAGTGGAAAAACCGGAGGAGAAGTTCGCGATCCTGGAAATAATCATTCCCACAACACAAACAACAACAATGCAACGTCTAATCATCAACAACAAACAAGTTGGAGTTTCGAGGAGCAGTTCAAACAGTTATACGAGATTAATGACGATCCTAAACGAAAAGAGTTTCTCGATGACCTCTTCAGTTATATGCAAAAACGAGGAACGCCGATCAATCGGTTACCGATCATGGCAAAATCAGTATTGGATCTTTACGAACTATATAATCTTGTGATCGCTCGTGGCGGTCTGGTCGACGTTATAAACAAAAAGCTTTGGCAGGAAATCATCAAGGGTCTCCACCTGCCTTCTAGCATTACTTCCGCTGCATTTACTCTTCGCACTCAATACATGAAATATCTCTACCCATACGAGTGCGAAAAACGACGATTATCAACTCCCGCGGAACTTCAAGCAGCGATCGACGGAAATCGTCGAGAAGGCCGCAGGAGCAGTTATGGCACATACGCTGCCGGTGGACCAGGTAACGAGGGCTTGGTCCAAAGAAATCCACCGAACTCGCTGGCATTGCGAGCTCAAATGTCACCATTATCATTGGTGACAGCGGTGTCGGGTCATCACGGAGCTGGACAGTCATTGGTTAACGGACATTCAGCTCACACGAGTTTACCGCACCATCATCATCATCACCCGCACCATGCTCAACATGCCCAAGGACCGTTGAGCCAACCTCCTACCTTGTCTATGTCAAATTTAGCACCATCGGAGTTTGAAGCACGTATGGTAGAGTACGTAAAATTATTAAATAAGGAATTAAGAAATGCAGGAGCAGGTACTCCACCACCGATAATAAATCGACAAGGTAGTTCAACACCACCTCCATCGACACCTCCTAAAGATGCTAATACGAGCAATTATGAGATGTCGCGGTTAACCTTATGGGGAATGTACGGCAATAATAACCCCATATATTCGGCAGTGATACACCAACCATCGGTATCACCACAAACGTCACAATCGCCGTTACAACAAGCGTCCAGTCCAGAACCGCAAAGAGAAGCGTTAGATCTTGGACTGAGGTCCTCACCCGTATGTTCCTCGCCATCTGGACCAAGTCCTTTATCATCTGGCAGCAGTTTTCACACAAGAAAGGACAATGAACAAGGTCCACCAGCTGCCAAAAGACTGCTATGCGACGAGGATAATCCACCTGATAAAAATCCTTCTTCCTCCACAGGAACACACATCAAGATCTGCAATCGAGGAGATGGAAGAAATGGTGAAAATTCTCTAGTAGTCAGCGTGGAACTGAACGGTGTCACATATCAAGGAGTTCTTTTTGCCCAAACCGATTCGAAGAATACAACATCATCATCATCATCAACGACGTTGACCCATAACGAAAATGGAAAAACTTCACGGAGCATTGCATCGTGA
- Protein Sequence
- MEMSDDYQDMVNPGGGVAMGNIQPMGHHRHTPESPLSHQEDDLSDPDLQDEESGEELPQQPHAGHSTHQNPSDPSSISTNTTPTPLTNLNTLMNTHHPHFLAKLKMEADVDILNNKSGLEALQAAMGSGGFSLPFSFPPTFLPPQHHGQNNHAQSGLVPSTSSAAAAAAAVVALGSGLGAGLGPPGLNTASGSNINQATSSASSHSSESSQCSGKTGGEVRDPGNNHSHNTNNNNATSNHQQQTSWSFEEQFKQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYAAGGPGNEGLVQRNPPNSLALRAQMSPLSLVTAVSGHHGAGQSLVNGHSAHTSLPHHHHHHPHHAQHAQGPLSQPPTLSMSNLAPSEFEARMVEYVKLLNKELRNAGAGTPPPIINRQGSSTPPPSTPPKDANTSNYEMSRLTLWGMYGNNNPIYSAVIHQPSVSPQTSQSPLQQASSPEPQREALDLGLRSSPVCSSPSGPSPLSSGSSFHTRKDNEQGPPAAKRLLCDEDNPPDKNPSSSTGTHIKICNRGDGRNGENSLVVSVELNGVTYQGVLFAQTDSKNTTSSSSSTTLTHNENGKTSRSIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01512629;
- 90% Identity
- iTF_01512629;
- 80% Identity
- -