Vpen005434.1
Basic Information
- Insect
- Vespula pensylvanica
- Gene Symbol
- -
- Assembly
- GCA_014466175.1
- Location
- CM025340.1:4225717-4237994[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-08 0.00053 18.8 0.7 44 130 19 104 15 179 0.68 2 2 0.00047 5.7 5.5 0.4 355 381 187 213 184 229 0.83
Sequence Information
- Coding Sequence
- ATGCCAAGTATTAATTTTGATGATAAGCAAGCCTTTGTGAATCCAGACACCCAAGATCGTACTACCCAGCAAATTCAATCTAAGCTGGGTAATTATTCTCTGGTGAAACACCTATTAGATGAACCAAAGAGATTAATCGGAATCGAGGGTGTCCCAGCGAGTCCTGCACCTACTGCTACTTCCTCCTCGCATCGTACAAGCGTTAGCGCGATCGGATCAAGCTCCAGGAGTTCTCCGTCTCCACAGGAATTTAAAAAACCTGGTGGCCCGAGGACGAGTATTTCCTCGTCTTCCACGACGACCCATCAACGTGGTGCATTCGTTAAACCTGTTGACGGAAAACCACCTTATGGCGGCCGTACAGGTTATTCCGGGCCGCTCATGAAACATTCTGGAAACAGTAGTAATGATCATCGTAATCACAGTTTACTACCCCTTAAGGGACAACCCGTTAAATCGCCTGGGAATATCTTAACTGGAAATGCATCCAGCATAGGCAACTCTGCCAATCGACTTCATACAGCTGCGAGCAGATTATCAAGGTTACCTTTGGATAACGAAATGACGATTCCACCGACACCATTAACAGCCATAGCACAAACACCGAGGAAAGAGCTTGAATCAAAGTTTACTTTTAATCCAGTTTTGGCAAAGTTAACCGAAGTGGTTCCATCTGATTCTACAAAACCTCTTGGTAAGTATTATTATTAA
- Protein Sequence
- MPSINFDDKQAFVNPDTQDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPTATSSSHRTSVSAIGSSSRSSPSPQEFKKPGGPRTSISSSSTTTHQRGAFVKPVDGKPPYGGRTGYSGPLMKHSGNSSNDHRNHSLLPLKGQPVKSPGNILTGNASSIGNSANRLHTAASRLSRLPLDNEMTIPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVVPSDSTKPLGKYYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01514816;
- 90% Identity
- iTF_01514816;
- 80% Identity
- iTF_01514816;