Basic Information

Gene Symbol
KDM5A
Assembly
GCA_014466175.1
Location
CM025356.1:823261-834940[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-25 3.1e-22 78.2 0.0 2 89 113 196 112 196 0.94
2 2 2.8 4.9e+03 -2.5 0.1 49 81 826 856 823 861 0.65

Sequence Information

Coding Sequence
ATGGTATCGAGATACCACGACGCTACTTCCGACTTCGCTTCTCAGGATCGTTTCGGTGCATATTGTTGTCGTACCCAGGACATGGCCTGTGATCGTGCTGACTCGGACTTCGAGTTCTCTATACCGCCCGAGGCCCCTGTATTTGAGCCCAGCACTGAGGAGTTCCTCGACCCTCTTGGATATATCGCAAAAATAAGACCGATCGCTGAGAAATCTGGCATCTGCAAGATCAAACCTCCGCCCAATTGGCAGCCACCATTCGCAGTTGACGTTGACAAATTCAAATTTGTACCACGGATACAAAGACTAAATGAATTAGAAGCTAAAACTAGGATAAAACTCAATTTCTTAGATCAAATTGCTAAGTTCTGGGAATTACAAGGATCATCATTAAAAATACCTCTTGTGGAGCGTAAAGCTTTGGATTTGTATTCCTTACACAAGATTGTCACTGACGAAGGAGGTGTAGAAACAGTAACAAAGGAAAGAAGATGGGCAAAAATTGCCAACAAATTAGGTTATCCCTCTGGAAGAAGCGTTGGAAGTATTTTAAAAAATCACTACGAAAGAATTTTATACCCATTTGACGTATTTAAACAAGGAAAAGCCTTGACTGATATTAAAATAGAACCAGATTCTGATGAAAAAATTGAGAAAAGAGATCGTGATTACAAACCACATGGAATAATTTCAAGGCAACAAATCAAACCTCCTGCAGAGAAGTTTTCACGTCGTTCAAAGAGATTTTCTGGCCAAGAAGAAAAGCAAGAAGTCGGTATTAAGCAAGAAGATTGCAAAGAAGAATGTGATTCCGATCATGACTGCAGAGAAGGTATTGTTAGAAGCAGATATGTAGATAATGATAAAAGTAAGGAACTTAAGAAATTACAATTTTATGGAGCCGGTCCAAAAATGGCTGGTTTTAATACCAAAGAACCAAAGAAGTCTAACAAAACTAGAGGTGTTAAGCTAACGTACGAGTTTGACCCACTTGCAAAGTACATTTGTCATAATTGTGGGAGAGGTGACAATGAAGAAAATATGCTTCTGTGTGATGGCTGTGACGATAGCTACCACACATTTTGTCTAATGCCACCTTTAACAGAAATACCTAAGGGAGATTGGAGGTGTCCAAAATGTGTTGCAGAAGAAGTTTCAAAACCGATGGAGGCTTTTGGTTTTGAACAAGCACAAAGAGAGTACACCCTTCAACAATTTGGTGAAATGGCAGATCAATTCAAAAGCGACTATTTCAACATGCCAGTACATATGGTTCCCACTTCGTTAGTAGAAAAAGAATTCTGGAGAATAGTTTCATCTATTGACGAAGATGTGACAGTAGAATATGGTGCAGATTTACATACCATGGATCATGGATCTGGATTTCCAACGAAAACAAGTGTTAATTTATTTACGTGTGATCAAGAATATGCCGAATCCTCATGGAATTTAAACAATTTACCGGTTTTACGTGGTAGTGTATTAGGTCATATTAATGCGGATATTAGTGGCATGAAGGTCCCATGGATGTATGTCGGCATGTGTTTTGCAACATTTTGTTGGCACAACGAAGATCATTGGAGTTATTCTATTAATTACTTACATTGGGGAGAACCAAAAACGTGGTATGGCGTACCTGGTTCTCAGGCAGAAAAATTTGAACAGTCTATGAAGTCTGCTGCACCTGAATTATTTCACAGTCAACCTGATCTGTTACATCAATTAGTAACAATTATGAATCCAAATATCTTAACAAATGAAGGAGTACCGGTGTTTAGAACCGATCAACATGCTGGTGAATTTGTTGTAACATTTCCAAGAGCATATCATGCAGGTTTCAATCAAGGTTATAACTTTGCAGAGGCTGTAAATTTTGCACCTGCAGACTGGCTCAAAATGGGAAGAGAGTGCATCACACATTATTCAAATTTAAGGCGGTTTTGTGTATTTTCTCACGACGAATTAGTATGCAAAATGTCTTTAGATCCAGATTCATTAGATATTGGAATTGCTACAGCTACTTATCATGACATGTTACAAATGGTAGACGATGAAAAAAAATTGCGAAAAAATTTACTGGAGTGGGGTGTAACAGAGGCTGAACGCGAAGCCTTTGAGTTATTACCAGATGATGAACGACAGTGTGAAGCCTGTAAAACAACTTGTTTTTTAAGTGCAGTTACATGTTCGTGTCACAATTCCCAATTGGTTTGTTTAAGACATTTTACGGACCTTTGTGATTGTCCACCAGAAAAACATACGTTACGGTATCGTTATACGTTAGACGAATTGCCCATTATGTTACAAAAGTTAAAGTTGAAAGCTGAGTCTTTTGACTCATGGGTAACTAAAGTTAAAGAAGCCATGGATCCAAAGAATGATAAAGTTGAACTTAGTGAGTTGAAAGAACTTTTGAATGAAGCAGAAAATAAAAAGTTTCCGGATAGTGAATTGTTAACAGCTTTAACAACGGCTGTACAAGATGCTGAGAAATGTGCAAGTGTTGCACAACAGCTGTTAAACAATAAACAACGTACAAGGACCAGGCAATCTGTAGAGACAAAATATAAATTAACAGTGGAAGAACTGACATTATTTTATAAAGAAATAACAAATTTATGTTGCGAGTTAAAAGAGTCCGATGGCGTAAAGTTTATATTGGATCAGGTATTACAATTTCAAAGTGACGCAGAGGACTTGGAGTCTAAAGAAGATGATTGTGATATTGATAAACTAGAAAAGTGTATAGAGTTTGGAGATTCTATATGTATCGAACTACCACAACTTGTACGCTTAAAACAGAAATTAGCACAAATGCAATGGCTTGAAGAAATAAAATCCCTTCAAGAAGATCCAAAGTCCATAAGTCGTGAGGATTTGGTAAGATTAATAGAAAAGGGAACGACGATACCTCCGCACTTTAAAATAGAAAGTACTCTAGCAGAATTACGAACGTTGATGACTGCGATCGATAAGTGGGAAGAAAAAGCAAAGATATATTTGAATGCGAGGAATAGGCCGACAATTTCAGCAGTCGAAGAATTTGTTCGCGAGGCCGACGAAGTGGAAGCTTATCTTCCAAGTTTAAATACTTTGCAAGATATATTAAGTCGAGCGAAAAATTGGTCGAACATGGTGGAAGAGATTCAAGGGAGAGAAAATTTTCCATATTACGATACATTAGATGACATTGTTAGAAAAGGTAGGAGTATTTCATTACAATTGGATACTCTTTCGATGTTAGAATCTACACTTTCTCAAGCTAAAACTTGGAAAGAAAGAACAGTAAGGACATTCCTAAGAAAAAATTCACACTATACACTGATGGAGGCCTTATCACCGCGTATTGGAGTTGGTGTTCAAGCAATGAAGACAAAGAAAAATAAAGGCGATGAATCTGTCGGTGCTGTGTTCGTTTGTGATACAAAACTCGATGATTCGAATGACTCTGCGACTGTTGTAGCCGCGTTCAAATTGGCAGAACAACGCGAGATGGATGCTATGAGAAGTTTAAGGGAAAGAAATTTATTAAAAACTGAGATGGATGATTCTAGATATTGTGTGTGTCGTAGACCAAGATTTGGACTTATGCTTCAGTGTGAGCTTTGCAAGGATTGGTTCCATTCGAATTGTGTGCCGTTACCTAAGACAACGTATAAAGGCAAAGTACCGATGTCAAGAGAGGTGAAATTTTTGTGTCCATGTTGTTTACGTTCAAGGAGGCCTCGTTTGGAAACGATTTTAGCACTTTTAGTTAGCCTTCAAAAGATCTCAATACGTTTACCTGAAGGCGAAGCGTTGCAATGTCTCACAGAAAGGGCAATGAACTGGCAGGACCGTGCAAGGCAAGCTTTAGCCACGGAAGAAATTTCCTCGGCATTGGCTACGTTATCGGCACTTTCTCAAAAATTAGTCGAAGCTGCCGCCAGAGAAAAAACGGAAAAGATTATTAGTAGCGAATTAAAGAAAGCAGCTAATAATCCCGAATTACATCAAAGAGTACAAGCTATCGCACCTCTGAGTGGTGTTCATTCTGACGACAGTGTGCTTAGCACAGCAGATGACGACGATGATGTCGTTACGATCGACGACGATGAACCAACATGTAGTACTTTCAATATTTCAAAACTCCAACGTAAATCTCAATCAAGTGATTCCTCAGAAACAGCAGTAATCCTGTCGCACAGTGCAAGACAACATCTAGAAGAATTAATGATGGAAGGAGACTTACTAGAAGTTGCATTAGACGAGACACAACATATTTGGCGTATTTTAAGTCATACGAATAGTCCGAGTACTATTAGAAAATATGCGGCACTTGAAGAAATTCAAACTAATTGTAATCAAGAAACTAAGGACGCTAAGAAACGTGGTAGAAAGAGAAAATCTGAAGAATTTGAATTATTGAAGAAGCTTGGAAAGCAAAAAATCGACGACAAAAGTTTGGTTAAACGTAAGGGATTGATTAAAGAGAAAAAATCGGCTAGTTCACCGGTACCTGTAAAACGTGGCCCACGGAAGATGAAACGAAAAGATGGAGAGGAAGGTCCAAAGAAGAGAGGAGGTAACAGAAAGAAAACTAAGCAAGACACCTCGGACGAGGAGGAAGATTGCGCTGCTGTTAATTGTTTACATCCTAGTGGTAGAGAAGTTGATTGGGTACAATGCGATGGAGGATGCGAAGGTTGGTTTCATATGCATTGCGTTGGTCTTGATCGAACAGAAATCGCAGAAGAAGACGATTACATTTGTAGTAATTGTAAAGAGACAGACCAAAATGTAACGTCAAGAGGGCCAGATCCACTGGCTGAATCTTTAGGATTGGATGCACTTCTTTCCCTTTCTCAATCTCAGGCATACCATGGAACGGATACAGAAGCTAATATCCACGAAACTTCGTCATTCGTCAAGACCTACTAG
Protein Sequence
MVSRYHDATSDFASQDRFGAYCCRTQDMACDRADSDFEFSIPPEAPVFEPSTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGVETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKALTDIKIEPDSDEKIEKRDRDYKPHGIISRQQIKPPAEKFSRRSKRFSGQEEKQEVGIKQEDCKEECDSDHDCREGIVRSRYVDNDKSKELKKLQFYGAGPKMAGFNTKEPKKSNKTRGVKLTYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHNSQLVCLRHFTDLCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKVELSELKELLNEAENKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQSDAEDLESKEDDCDIDKLEKCIEFGDSICIELPQLVRLKQKLAQMQWLEEIKSLQEDPKSISREDLVRLIEKGTTIPPHFKIESTLAELRTLMTAIDKWEEKAKIYLNARNRPTISAVEEFVREADEVEAYLPSLNTLQDILSRAKNWSNMVEEIQGRENFPYYDTLDDIVRKGRSISLQLDTLSMLESTLSQAKTWKERTVRTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVFVCDTKLDDSNDSATVVAAFKLAEQREMDAMRSLRERNLLKTEMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKVPMSREVKFLCPCCLRSRRPRLETILALLVSLQKISIRLPEGEALQCLTERAMNWQDRARQALATEEISSALATLSALSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDDDEPTCSTFNISKLQRKSQSSDSSETAVILSHSARQHLEELMMEGDLLEVALDETQHIWRILSHTNSPSTIRKYAALEEIQTNCNQETKDAKKRGRKRKSEEFELLKKLGKQKIDDKSLVKRKGLIKEKKSASSPVPVKRGPRKMKRKDGEEGPKKRGGNRKKTKQDTSDEEEDCAAVNCLHPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKETDQNVTSRGPDPLAESLGLDALLSLSQSQAYHGTDTEANIHETSSFVKTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2