Basic Information

Gene Symbol
KDM5A
Assembly
GCA_032403825.1
Location
JAIFRP010000021.1:164768-175941[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-25 3.1e-22 78.5 0.0 2 89 111 194 110 194 0.94
2 2 4.7 6.5e+03 -2.6 0.1 49 81 823 853 820 857 0.64

Sequence Information

Coding Sequence
ATGGTATCGAGGCATCACGACGCTACCGACTTTGCTTCGGAGGATCGTTTCGGTACATATCGTCGTGCCCAGGACATGGCCTGCGATCGCGGTGACTCGGACTTCGAGTTCTCGATACCACCGGAGGCACCAGTCTTCGAGCCCACCACTGAAGAGTTTCTCGATCCTCTCGGATATATCGCGAAAATACGACCGATCGCTGAGAAATCTGGCATCTGCAAGATCAAACCGCCGCCCAATTGGCAGCCACCGTTCGCCGTTGATGTCGACAAATTCAAATTTGTTCCACGAATACAAAGACTGAATGAACTGGAAGCCAAGACTAGGATAAAACTCAATTTCTTGGATCAAATTGCAAAATTTTGGGAGCTACAAGGTTCCTCGTTGAAGATACCTCTTGTGGAACGCAAAGCATTGGACTTGTATTCCTTGCACAAGATCGTCACCGACGAAGGAGGCATAGAGACGgtaacgaaggaaagaagatggGCAAAGATAGCCAACAAATTAGGTTACCCTTCTGGAAGAAGCGTAGGCAGTATCTTAAAAAACCACTACGAACGAATTTTGTATCCTTTCGATGTTTTCAAACAAGGGAAAGCATTGACTGACATTaaaatagaaCCTGACTCCGATGAGAAAACTGAGAAGAAGGATCGTGACTATAAGCCGCATGGAATAATTTCGAGACAGCAAATTAAACCTCCCACAGAAAAGTTCTCACGTCGTTCCAAGAGATTTTCTGGGcaagaagaaaagcaagaagCGGGTATAAAACTAGAAGATTGCAAAGAAGAATATGATTCAGATATCGACTATAAAGAGGGCATAAGGTGCAGATATATAGATAATGATAGAAGTAAGGAACTTaagaaattacaattttatggAGCTGGTCCGAAGATGGCTGGTTTTAATACCAAAGAACCGAAAAAGCCCAACAAAACAAGGGGTGTTAAATTGACATACGATTTTGATCCATTGGCAAAATATATTTGTCATAATTGTGGAAGAggcgataacgaagaaaatatgcTTCTATGCGATGGTTGCGACGATAGCTATCACACGTTTTGTCTTATGCCACCTTTGACGGAAATACCTAAAGGAGATTGGAGGTGTCCGAAGTGTGTCGCAGAGGAGGTTTCTAAACCAATGGAGGCGTTTGGTTTCGAGCAAGCACAAAGGGAATACACTCTTCAACAATTTGGCGAAATGGCGGATCAATTCAAAAGCGATTATTTCAACATGCCAGTACATATGGTTCCTACTTCATTAGTAGAGAAAGAATTCTGGAGAATAGTTTCATCCATTGACGAGGACGTAACGGTAGAATACGGTGCCGATTTACATACCATGGACCATGGATCCGGATTTCCAACAAAAACTAGCGTTAATTTGTTTACATGCGATCAGGAATATGCCGAATCCTCTTGGAATCTAAATAATTTGCCAGTTTTACGGGGTAGCGTTTTAGGACATATTAATGCGGATATTAGTGGCATGAAAGTTCCATGGATGTATGTTGGCATGTGCTTTGCAACATTTTGTTGGCATAATGAAGATCATTGGAGTTATTCCATCAATTATTTACATTGGGGAGAACCAAAAACATGGTACGGCGTACCTGGTTGTCAGGCAGAAAAGTTTGAACACTCTATGAAATCTGCAGCACCCGAGCTGTTTCACAGCCAGCCTGATTTGTTGCATCAGCTAGTAACAATTATGAACCCAAATATCTTGACCCATGAAGGTGTACCAGTATTTAGAACCGATCAACATGCTGGTGAATTTGTTGTAACGTTCCCAAGAGCGTATCACGCGGGTTTTAATCAAGGTTATAATTTTGCAGAAGCTGTTAATTTTGCACCTGCCGATTGGctTAAAATGGGAAGGGAATGCATCTCGCACTATTCGAACCTACGACGATTTTGTGTATTTTCACACGATGAACTAGTATGCAAAATGTCTCTAGATCCAGATTCGTTGGATATTGGAATCGCTACAGCTACTTATCATGACATGTTACAAATGGtagacgacgagaagaagttGCGCAAAAATTTGTTGGAATGGGGTGTAACAGAAGCAGAACGCGAAGCTTTCGAGTTATTACCGGACGATGAGCGACAGTGCGAAGCTTGTAAAACAACTTGTTTTTTGAGTGCGGTTACATGCTCGTGTCACAGTTCTCAATTGGTTTGCCTAAGACATTTCACGGATCTTTGCGACTGTCCCCCTGAGAAGCATACCTTACGATATCGTTATACATTAGACGAATTGCCCATCATGTTGCAAAAGTTAAAATTGAAAGCTGAGTCTTTTGACTCATGGGTATCTAAAGTTAAAGAAGCTATGGACCCAAAGAATGATAAAGTCGAACTTAACGAATTGAAGGAGCTTTTGAACGAagcagaaaataaaaagtttccaGATAGTGAATTATTAACGGCTCTAACGACAGCCGTACAAGATGCTGAGAAATGTGCCAGCGTCGCGCAGCAGCTGCTAAACAACAAACAACGTACAAGAACGAGGCAGTCTGtcgaaacaaaatataaattaactgTGGAAGAATTGACattgttttataaagaaataacaaatttgtGTTGCGAATTGAAAGAGTCAGACGGTGTAAAGTTTATATTGGATCAAGTAGTCCAATTTCAAAGCGACGCAGAGAAACTAGAGTCCAAAGAAGACGATTGTGATGCTGGAAAACTAGAAAAGTGCATAGAGTTTGGTGATTCTATATGTATCGAATTACCACAGCTTATACGCTTAAAACAGAAATTGGTACAAGTGCAATGGCTGGAAGAAGTAAAGTCACTGAAGGAAGATCCAAAGTCTATAGGCCGAGAAGATCTGGCAAGgttaatagaaaaaggaatgaCGATACCGCCGCACTTTAAAATAGAGAACACTCTCTCCGAGTTACAAACGTTaatgatcgcgatcgataagtgggaagaaaaagcaaaagtgTATCTTAACGCGAGGAATAGGCCAACGATTCCTGCGGTCGAAGAATTCATTCGCGAAGCTGATCAAGTGGAGGCGTATCTTCCGAGTTTAGATATACTACAGGATATATTGACTCGTGCTAAAAATTGGTCGAACATGGTGGAGGAAATTcaagggagagaaaatttcCCGTATTACGATACTTTAGATGACATTATTAAGAAGGGTAGGAGTATCCCGTTACATTTGGATAGTCTTTCGACGTTAGAATCGACTCTTTCTCAAGCAAAAacttggaaagagagaacagtaAGGACATTCCTAAGAAAGAATTCGCACTATACATTGATGGAGGCTTTATCACCGCGTATCGGCGTTGGCGTTCAAGCtatgaaaacgaagaaaaataaaggagacgAATCGGTCGGCGCCGTCTTTGTTTGCGATACGAAACTCGACGATTCTAACGATTCGGCAACCGTCGTAGCCGCGTTCAAATTGGCGGAACAGCGGGAGATGGACGCGATGAGAAgtttaagagagagaaatttattaaaggcAGAAATGGATGATTCTAGATATTGCGTATGTCGTAGACCGAGATTCGGACTTATGCTTCAATGTGAACTTTGCAAAGATTGGTTTCATTCGAATTGCGTACCATTGCCTAAAACAACGTACAAAGGTAAAGTCCCGATATCGCGAGAGGTTAAGTTTTTGTGCCCGTGTTGTTTACGTTCACGAAGGCCTCGCTTGGAAACGATTTTAGCACTTTTGGTTAGTCTTCAAAAAATCTCGATTCGTCTACCCGAGGGCGAAGCGTTGCAATGTCTTACGGAACGAGCGATGAATTGGCAGGATCGTGCGAGGCAAGCCTTAGCTACCGAAGAGATATCTTCTGCATTAGCGAAATTGTCTGCGCTTTCTCAAAAATTAGTCGAGGCGGCTGCTAGAGAGAAAACTGAGAAAATAATAAGCAGCGAATTGAAGAAAGCTGCTAACAATCCAGAATTACATCAAAGAGTGCAAGCTATCGCGCCTCTCAGTGGTGTACATTCGGATGATAGCGTGCTCAGTACTGcggacgatgacgacgatgtcgTAACCATCGATGACGACGAACCAACGTGTAGCACCTTCAATAGCAACGAACATGCCTACTCTTACATTTCGAAACTACAACGTAAATCACAATCGAGCGATTCGACGGAGACTGCGGTCATCTTGTCGCATTCCGCGAGGCAACATCTGGAGGAACTAATGATGGAAGGGGACCTCTTGGAGGTCGCTTTGGACGAGACGCAACACATTTGGCGTATTTTGAGTCATACCAATAGTCCAAGTACAATTAGAAAGTATGCCGCGCTTGAAGAAATTCAAACTAATTGTAATCAGGAGGCCAAAGATGCTAAGAAACGCGGCAGGAAGAGAAAGTCAGAGGAAATTGAGTTGCTGAAAAAACTTGGCAAGCAAAAGGTGGACGAGAAAAGCTTGGTTAAGCGCAAAGGActggcgaaagaaaaaaaaacggccAGCTCACCGGTATCGATAAAGCGTGGACCACGGAAGatgaaacgaaaggaaggagaggagggtccaaaaaagagaggaggaaataggaagaaaacgaaacaaGATACTtcggacgaggaagaggattgCGCGGCGGTTAGCTGCTTACATCCAAGTGgTAGAGAAGTCGATTGGGTACAATGCGACGGAGGATGCGAGGGTTGGTTCCACATGCACTGCGTCGGCTTGGATCGTACGGAAATCGCAGAGGAGGATGACTATATTTGTAGTAATTGCAAGGAGACTGATCAAAATGCAACGTCAAGAGGGCCAGACCCACTGGCCGAATCTTTAGGATTGGATGcacttctttccctttctcaaTCTCAGGCTCAGGCATACCATGGGACGGATACCGAAGCGAATATCCACGAAACGTCGTCATTCGTCAGGACCTACTAG
Protein Sequence
MVSRHHDATDFASEDRFGTYRRAQDMACDRGDSDFEFSIPPEAPVFEPTTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKALTDIKIEPDSDEKTEKKDRDYKPHGIISRQQIKPPTEKFSRRSKRFSGQEEKQEAGIKLEDCKEEYDSDIDYKEGIRCRYIDNDRSKELKKLQFYGAGPKMAGFNTKEPKKPNKTRGVKLTYDFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGCQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTHEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTDLCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKNDKVELNELKELLNEAENKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVVQFQSDAEKLESKEDDCDAGKLEKCIEFGDSICIELPQLIRLKQKLVQVQWLEEVKSLKEDPKSIGREDLARLIEKGMTIPPHFKIENTLSELQTLMIAIDKWEEKAKVYLNARNRPTIPAVEEFIREADQVEAYLPSLDILQDILTRAKNWSNMVEEIQGRENFPYYDTLDDIIKKGRSIPLHLDSLSTLESTLSQAKTWKERTVRTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVFVCDTKLDDSNDSATVVAAFKLAEQREMDAMRSLRERNLLKAEMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKVPISREVKFLCPCCLRSRRPRLETILALLVSLQKISIRLPEGEALQCLTERAMNWQDRARQALATEEISSALAKLSALSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDDDEPTCSTFNSNEHAYSYISKLQRKSQSSDSTETAVILSHSARQHLEELMMEGDLLEVALDETQHIWRILSHTNSPSTIRKYAALEEIQTNCNQEAKDAKKRGRKRKSEEIELLKKLGKQKVDEKSLVKRKGLAKEKKTASSPVSIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEEDCAAVSCLHPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKETDQNATSRGPDPLAESLGLDALLSLSQSQAQAYHGTDTEANIHETSSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_01513949;
80% Identity
-