Vger003684.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vespula germanica
Gene Symbol
Rel
Assembly
GCA_905340365.1
Location
HG996531.1:2673972-2678948[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-44 2.7e-40 137.8 1.1 2 168 82 271 81 272 0.92

Sequence Information

Coding Sequence
ATGCcggaatataaaaatttcgcaGCGATGAAAGGAATATTTGATGATCTTCAGGATTACGGTACTTGTGGAAATGatctAATGTTCATTAGCTCTACTAATGCATTGAGtctttataataatcatatagaTTCAAacgtaaattttaatattgaatcACCTATGTCTACTACTTCATCACCATCACATATGCCTACATATATGTCATTAGATGATTATACCGCTATTGGTGAACCACATCTTATCATAACAGAGCAACCAGTAGAAAAATTTAGATTTCGTTATAAATCTGAAATGATCGGAACGCATGGAAGTTTAGTTGCAGCAAGTAATACGACTGCTCATAAAAAATGTGCTCCTACTGTCCAAttaagaaattttcaagataaaGCAATAATTCGCTGTACATTGGTTACATCGGatgatagaaaggaaagactTCCACATGCTCATCATCTAGTTAGAAGGACAGGACATAAGGATCAAGATGATCCCCATGAGATAGAAGTTTCTCAAGAAAATGGATTTACTGCTGCattttatgGAATGGGTATAATACATACTGCAAAAAAACATATCAAGGATGAACTTGTACGAAAACTTCAGTTTGAGTTACTAGaagaacgtaaaagaaaaaatattaatgcaaTTCTTTCAACACGTGATGAAGTACagATTAAAGCTGATGCAGATATTTAccaaaaatcaataaatcttAATAGTGTGTCTCTGTGCTTTCAAGCTTTTATTAaggatagaaataatattatgacTCCAGTTACAGAACCTGTTTATTCTAATCCGATTAATAATCTTAaaAGTGCTCTTACTGGGGAATTGAAAATCTGCAGAATAGATAAATTTACAAGTTCTTGTGAAGGTGGAGAAGAAGTATTTATATTAGTAGAAAAAGttggaaaaaaaaatataaaaataaaattttttgaattaaatGAAGATGATATTGAAATCTGGTCTGATTATGGTCGCTTTTCTGAGTTGGATGTACATCATCAATATGCTATTGTATTCCGcACTCCAccatataaagatataaatattacctCTTCAAAAGAAGTTTTTATACAGTTAGAACGACCAAGTGACCATGATTGCTCAGAACctattaaatttacatataagcCAAGTGACAAAATATtagGTAGAAAAAGACCACGTACATCTTATTCAAATAGTATTGAATTGGCACAATCATTATCTACTATGCAAAACAATGATTCATTTACAAAATTGAATGATAGCCAAGAAATCtctaaagaattaaaagatatattactAGAAGGATGCTCATCTTCGgaatatcgtaattttttacAAGGCGTAGATCTGGATAgaTATATGAAACTATTAAATAATAGTGAAGAAGAAGGACTCACATGGGATGGTCCGTCTACAAAAAAAttGGATGATGATATCATATTTGCCAAGAATATTGTATTTGAAGCCATTAATATCgttcaaaaggaaataaatgataaaaatggagaaattagtcctaataaaaaaaaacaattaaaaaagttaCTTATGGATAGATCTACTTATGGCGATTCACCATTGCATGTAGCTTTACGTTATGGTCAACGCGACCTCGTAAAATACATTTTGATACTTATGGGAACTGATCCAGAATATCAAATACTTGTAAATATACAAAACAGTTCAGGAAAAACACCGTTGCATTATGCTGTTCTACAAAATCAGCCAATCATTATAAAAGCATTATTAACACTTGGAGCAGATCCAAGTATATGTGATGACCATGGTTTTTCTCCATTACATACTGCTGTAAGAATACCTAATGCTGGAGCATGTGTAGATACTTTATTATCCAATAAACTAATTGATATCGAAAATTACAATGATCTTGGATGGACATCTCTACAACTTGCTGCAGAAGCAGGTTCATTTGATGCTGTATGTTCTCTCGTTCGAGCAGGAGctaatgtaaataatacagATAAATCGTACGGCCGTACTGTATTACATATAGCAGTTGAAGGAGGTCATAAAGAAATAGTTGAATTTTTATTGAGAAATAGTGATATTGATATAAACAAAAGCAATTTTAGCGGAAATACGGCATTACATACTGCAGTAGCATATTCTGGAACAAGAGCAAAAgaattatgtaaattattaatggaaTATGGAGCAGATCCACATATCCAAAATAATAGCAGTTCAAGCTTAGAtgatATGGAACAAGAAGTAAATGAAGTTAACATAAAAGTTGAAGTAGAatccgaagaagaaaatatagatgAAACTGTTGGACAGTCATCTTTTGATTTAGCCACTAATAAGCcagaaATTTTGCAACTTCTAATGGGACATGATAACAATAcacaagaagaaaataaattaatctcatctataaaagaagaaatattaaatgagGATACAAAAAGTAATTGGTtgaacaatgaaaataaacagaaattaGCTGCAATTTTGGATAAAACCAAAGGCTGGGAAAAATTAGCTAAACATTTAAATCttgaatttcttttacaatCATTGTGCCAAAACTCATTAAGTCCatctttattacttttaaattatatagatGTACAGGGTGACATTACACTTACACAGATGCACGATTTCTTAAATGAAATCAAAGAAGTTGAAGCAGCACTATTTATCATCGACTTTGTGAGGCATCAATAA
Protein Sequence
MPEYKNFAAMKGIFDDLQDYGTCGNDLMFISSTNALSLYNNHIDSNVNFNIESPMSTTSSPSHMPTYMSLDDYTAIGEPHLIITEQPVEKFRFRYKSEMIGTHGSLVAASNTTAHKKCAPTVQLRNFQDKAIIRCTLVTSDDRKERLPHAHHLVRRTGHKDQDDPHEIEVSQENGFTAAFYGMGIIHTAKKHIKDELVRKLQFELLEERKRKNINAILSTRDEVQIKADADIYQKSINLNSVSLCFQAFIKDRNNIMTPVTEPVYSNPINNLKSALTGELKICRIDKFTSSCEGGEEVFILVEKVGKKNIKIKFFELNEDDIEIWSDYGRFSELDVHHQYAIVFRTPPYKDINITSSKEVFIQLERPSDHDCSEPIKFTYKPSDKILGRKRPRTSYSNSIELAQSLSTMQNNDSFTKLNDSQEISKELKDILLEGCSSSEYRNFLQGVDLDRYMKLLNNSEEEGLTWDGPSTKKLDDDIIFAKNIVFEAINIVQKEINDKNGEISPNKKKQLKKLLMDRSTYGDSPLHVALRYGQRDLVKYILILMGTDPEYQILVNIQNSSGKTPLHYAVLQNQPIIIKALLTLGADPSICDDHGFSPLHTAVRIPNAGACVDTLLSNKLIDIENYNDLGWTSLQLAAEAGSFDAVCSLVRAGANVNNTDKSYGRTVLHIAVEGGHKEIVEFLLRNSDIDINKSNFSGNTALHTAVAYSGTRAKELCKLLMEYGADPHIQNNSSSSLDDMEQEVNEVNIKVEVESEEENIDETVGQSSFDLATNKPEILQLLMGHDNNTQEENKLISSIKEEILNEDTKSNWLNNENKQKLAAILDKTKGWEKLAKHLNLEFLLQSLCQNSLSPSLLLLNYIDVQGDITLTQMHDFLNEIKEVEAALFIIDFVRHQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01513941;
90% Identity
iTF_01513941;
80% Identity
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