Basic Information

Insect: Vespa mandarinia
Gene Symbol: -
Assembly: GCA_014083535.1
Location: JACHAV010000016.1:753293-756907[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00099 0.071 13.1 0.5 1 23 102 125 102 125 0.94

2 13 0.0077 0.56 10.3 4.6 2 23 254 276 254 276 0.91

3 13 0.00061 0.044 13.8 1.0 2 23 326 348 325 348 0.95

4 13 4.3 3.1e+02 1.6 7.6 3 23 433 454 432 454 0.95

5 13 0.038 2.7 8.1 0.2 1 23 503 526 503 526 0.97

6 13 9.4e-05 0.0067 16.3 1.0 2 23 577 599 576 599 0.96

7 13 0.0023 0.16 12.0 0.1 3 23 627 648 626 648 0.91

8 13 0.0057 0.41 10.7 3.6 2 23 708 730 707 730 0.96

9 13 0.077 5.5 7.2 4.2 3 23 745 766 743 766 0.92

10 13 0.0003 0.021 14.8 0.1 2 23 813 835 813 835 0.93

11 13 0.1 7.5 6.7 1.5 1 23 916 938 916 938 0.97

12 13 0.00027 0.019 14.9 1.7 2 23 952 974 951 974 0.96

13 13 0.005 0.36 10.9 0.8 1 23 1054 1077 1054 1077 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00099	0.071	13.1	0.5	1	23	102	125	102	125	0.94
2	13	0.0077	0.56	10.3	4.6	2	23	254	276	254	276	0.91
3	13	0.00061	0.044	13.8	1.0	2	23	326	348	325	348	0.95
4	13	4.3	3.1e+02	1.6	7.6	3	23	433	454	432	454	0.95
5	13	0.038	2.7	8.1	0.2	1	23	503	526	503	526	0.97
6	13	9.4e-05	0.0067	16.3	1.0	2	23	577	599	576	599	0.96
7	13	0.0023	0.16	12.0	0.1	3	23	627	648	626	648	0.91
8	13	0.0057	0.41	10.7	3.6	2	23	708	730	707	730	0.96
9	13	0.077	5.5	7.2	4.2	3	23	745	766	743	766	0.92
10	13	0.0003	0.021	14.8	0.1	2	23	813	835	813	835	0.93
11	13	0.1	7.5	6.7	1.5	1	23	916	938	916	938	0.97
12	13	0.00027	0.019	14.9	1.7	2	23	952	974	951	974	0.96
13	13	0.005	0.36	10.9	0.8	1	23	1054	1077	1054	1077	0.98

Sequence Information

Coding Sequence: ATGTCGTCGACGATGGCACAAGAGACGACGATATCGGATCTCACGGAACTAGACAGCGACGGAGGCTCGAGTTCGGAGGAACGAGATTTGAGAAAACGTCTTCGCGGAGACGCTGATTTTGCTGGACCGAAGAAGAGACGAAAGCAAACGACACCGGTAAGATTTTCATCGTCCTTGATGAACGAACTACAGGAGGAGTCGAACGAAGACgaggaggatgatgatgatgaggaggaggaggaagaggaagaggaggaaggagaaTTGGACGTTGACAGCGAAGatgaaaatctAAACAACGAATTTCGTTGTCAGTATTGCGGTCAATTTCTCGATAGCAAGGAAACGTTGAACGTACATTTGGATAACGAGCACGGTGCGGCGACTAATCAAACGACTAATCATCTATTGCAAAACAGATCATCCTCGGCCGTGATAAAATTGGAAGGATCGAACGATCATCAATCGGAGAGTCCCGTTAATCTATTGACCGTAAAAAATTTCGCATCTTCCTGGTTGaatcagcaacaacaacaaaacgTCCAATCGCAAACGCATATACAATCGCAAAACGACGAGCCATGGCCAGGGCCATCGAGTCAATTGGCAATGAGCAATCATTTGCAAGCGTTAACTGGATTCCCAGGTGCTCTGGGTTCGTATCTTCCTTTACCGACATTTCCATTGCATGCCGATCCAACGCATATCCCAAGAACGTCCATACCTTCCGCACCCGTTAGGATCTTTAATCCTGAGGCTTATTGCGATTTATGCAACAAAGAATTTTGTAACAAGTATTTCTTAAAAacgcacaaggccaacaagcACGGTATTTACGTTGATTCGCCAGGACCTAATACGaccaacgataataatagtgccAACGTCCTTCCATCGCAAATATTCCCGAGCGGTGGTTTTACAagtacgtcgattaaattggAACCGCCGGCTACGCCGCCGATGCCAAGCGTTCCGTGCGACGTATGTCAAAAACGTTTCAAGAACGACGAATCGATGAGAAAGCACAAGCAAAAGATTCACAACGAGTCGATCGAGCAAACGGCCGATCAATCTTTGCCTGCTTCGCAAAGCGAAGACGACAGGGAGACACCGCGCAGTAGTCCTGGCGGCATAGAGACCCTGTTCAAGCAAGAATTTGGCATCGAGCAAGAGGATACGACGTTTATGCCAGCACCTAGACACCTCTCACCTCAATCGATCCAACAAGCTCGAGACTCGGGATTCAATGCcgatcgtcttcgtcgtttaGGCGTTATCAATCCCGAAGCATTCTGCGAGATTTGTTGCAAGGAATATTGCAACAAATATTTCCTTCGTACGCACAAAATGAAGAGACACGGTATAATCGTACATGACAACGAAAAATCACCTAGCAATCCTGCGGCGGCGCTCACCTGGCATCAAGTACAAACTAGTCCCCTTAATTTGATAGTGGCCGAGTCTGGCAATGGATCGGAATCGAACGATCGTACAAACGACGATTACGAGTGTAAACCTTGCGGCATACGTTTTCAAACGGTCGGTCTTTATCAGGCACATTCTAGGAAAATCCATGAAAACGAGGAACAACAATCGCCGAAACAAGAATTCGATCAGGACACGTCCGACCAACGTACCGATTCCATTTCCGAAGATCTTCAAAAACTTCAGACGATGATCCTGCAATTGAATGGTTTGGAATCTAACATAGGAAAGGGATTACAATCCTGTAACATATGCGGGAGAGAGTGCGAATCTAGAACATCTTTGCGAATTCACATGGCGACCGAGCATTCTCACGTCACGGAGAATCCGTCGCAATCGCCGATTCAAGATAAATCATGCGAATCAGGAAATACAACGATCGTAGCTTTTTGTACACTTTGCGAGAAGGATTATGTAAGTCAAGAAGCTTTGAAGAAACATATTGTCGAGGAACATCAGGCAACGATACCAAATCCATTGTCGCAagtacctcctcctcctcctgctaTTGGTTCTACCGTTATTAATACGAATACTTTGATCAATTCTACATCGAGTATCATGACGATACCAACGAGCGGCAATCAAACGCAAACGGAAAAAAAGATCACCTCGATGACGCCAACCTCGAGTTATTGCGAAATTTGTAACAAAGAAttgtgtaataaatatttcatgaagACCCATATGCAAAGGATGCAtggaatagaaatagaaaatggcGCTCAAATTGGTGGTGTTATATGTAACATCTGTAACAAGGAACTCTGtagtaaatatttcttaagagTTCACAAACATAATACGCATGGTATCGTCGACGAAAATGCTACTACCTCGTCCTCGGCCAAACAGGAGGCTTACGATGCCTCGAGCTCCGAGGATTCGGCTTTGAAGCCGGAACAATTGGGTGACCTAAGTCATCGATATTTTACACATTTCACCGAGGTCTGTCCGATTTGTAGCCGTAGGTTTCGCAGTATCAAATGGCTCAAGGCACATCTGTTGGGAGATCATGGAAAAATCGGTATCGATAAGTGGCGCGATATGGAACAACAATATCAAGCCACAACGAGGAACGCTAATAGAtctggtaataataattcgaaaaatgTTCAACAAGTTTCGAATCTTAAAATACCGAATGGCTACGAACTGAGCCAACAAAATAAGACGACCGATTTAACCAGTAACATTGGTAATCAAGTATTGTCGAATTTATTTGGTTCTACCTCGGACGatcaacaaatgaaaaattatcgttGCAGTTATTGCAATTTTTCGACGACAattttaccatttttattcCTACACGAGAGATCCCACGTTAACACTCAAGAAAGCATAGACACCGACAATACTCTCCAATGTCCAATATGTTCTCAAGGATTCCATCAGCCTGAACAATTGCACCAACATTTGCTAACCAGACATCAATTTCCGGCACTGCTAACGCAGTTTCAAACGCCCATACTTGGAAATCAAAACATTGATCAGGAAAAGGTTAGTAACGATCCGAAGGATTTGAGATCGGAGGAATCGAAGGACGATAATGTAAACAGGAATCAGATTAATCCAACGATGAGTCAGAATCTTGTCCCCGTCCCCGAACAAAtaagaaatcaaagaaatcAAGAGGACAATGCCGTACAGGTGACTCCCCATGGTGCTTACAAGTGTGCTCAATGCGGATACGCGACTACGAATCTTAACAGAATTAAAAAACACGTTAGAAAGGATCACACTGCGATCGGTGATCCAACGGACAGCGTAATAGCCGAACTTAGCAAAACTTTGAAGGACGTTGCTAATAGGCACAAATTGCCAGCCTGTTATGCAATGCCACAGGATATCAACGTCGGTGATAAAACAATAATGCAACCGTTCCTGATAGACGAACAACAGGATCCATCGTTGCATAACAGCGACGAATCCAATTCGGAAAAACGATTTATGCCAGCTCTCGTTTATCTACCTGTTAAATCACGAATTAGCAGTGCACTGACCGCGTCCTTCACTCTCACACCTGcctaa
Protein Sequence: MSSTMAQETTISDLTELDSDGGSSSEERDLRKRLRGDADFAGPKKRRKQTTPVRFSSSLMNELQEESNEDEEDDDDEEEEEEEEEEGELDVDSEDENLNNEFRCQYCGQFLDSKETLNVHLDNEHGAATNQTTNHLLQNRSSSAVIKLEGSNDHQSESPVNLLTVKNFASSWLNQQQQQNVQSQTHIQSQNDEPWPGPSSQLAMSNHLQALTGFPGALGSYLPLPTFPLHADPTHIPRTSIPSAPVRIFNPEAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGPNTTNDNNSANVLPSQIFPSGGFTSTSIKLEPPATPPMPSVPCDVCQKRFKNDESMRKHKQKIHNESIEQTADQSLPASQSEDDRETPRSSPGGIETLFKQEFGIEQEDTTFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIIVHDNEKSPSNPAAALTWHQVQTSPLNLIVAESGNGSESNDRTNDDYECKPCGIRFQTVGLYQAHSRKIHENEEQQSPKQEFDQDTSDQRTDSISEDLQKLQTMILQLNGLESNIGKGLQSCNICGRECESRTSLRIHMATEHSHVTENPSQSPIQDKSCESGNTTIVAFCTLCEKDYVSQEALKKHIVEEHQATIPNPLSQVPPPPPAIGSTVINTNTLINSTSSIMTIPTSGNQTQTEKKITSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENATTSSSAKQEAYDASSSEDSALKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLLGDHGKIGIDKWRDMEQQYQATTRNANRSGNNNSKNVQQVSNLKIPNGYELSQQNKTTDLTSNIGNQVLSNLFGSTSDDQQMKNYRCSYCNFSTTILPFLFLHERSHVNTQESIDTDNTLQCPICSQGFHQPEQLHQHLLTRHQFPALLTQFQTPILGNQNIDQEKVSNDPKDLRSEESKDDNVNRNQINPTMSQNLVPVPEQIRNQRNQEDNAVQVTPHGAYKCAQCGYATTNLNRIKKHVRKDHTAIGDPTDSVIAELSKTLKDVANRHKLPACYAMPQDINVGDKTIMQPFLIDEQQDPSLHNSDESNSEKRFMPALVYLPVKSRISSALTASFTLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512429; iTF_01513746; iTF_01515080; iTF_01514423; iTF_01090227;
90% Identity: iTF_01512429;
80% Identity: -