Basic Information

Insect: Odynerus spinipes
Gene Symbol: -
Assembly: GCA_032403825.1
Location: JAIFRP010000007.1:1001212-1004652[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.001 0.064 13.5 0.4 1 23 108 131 108 131 0.96

2 13 0.01 0.65 10.3 4.6 2 23 255 277 255 277 0.91

3 13 0.00058 0.037 14.3 1.8 3 23 324 345 323 345 0.96

4 13 5.8 3.7e+02 1.7 7.6 3 23 429 450 428 450 0.95

5 13 0.98 62 4.1 1.4 1 23 499 522 499 522 0.93

6 13 8e-05 0.0051 17.0 0.8 2 23 573 595 572 595 0.96

7 13 0.003 0.19 12.0 0.1 3 23 619 640 618 640 0.91

8 13 0.0076 0.48 10.7 3.6 2 23 689 711 688 711 0.96

9 13 0.1 6.5 7.2 4.2 3 23 726 747 724 747 0.92

10 13 0.00039 0.025 14.8 0.1 2 23 792 814 792 814 0.93

11 13 0.048 3 8.2 1.6 1 23 894 916 894 916 0.98

12 13 0.0026 0.17 12.2 0.8 2 23 930 952 929 952 0.93

13 13 0.0067 0.42 10.9 0.8 1 23 1028 1051 1028 1051 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.001	0.064	13.5	0.4	1	23	108	131	108	131	0.96
2	13	0.01	0.65	10.3	4.6	2	23	255	277	255	277	0.91
3	13	0.00058	0.037	14.3	1.8	3	23	324	345	323	345	0.96
4	13	5.8	3.7e+02	1.7	7.6	3	23	429	450	428	450	0.95
5	13	0.98	62	4.1	1.4	1	23	499	522	499	522	0.93
6	13	8e-05	0.0051	17.0	0.8	2	23	573	595	572	595	0.96
7	13	0.003	0.19	12.0	0.1	3	23	619	640	618	640	0.91
8	13	0.0076	0.48	10.7	3.6	2	23	689	711	688	711	0.96
9	13	0.1	6.5	7.2	4.2	3	23	726	747	724	747	0.92
10	13	0.00039	0.025	14.8	0.1	2	23	792	814	792	814	0.93
11	13	0.048	3	8.2	1.6	1	23	894	916	894	916	0.98
12	13	0.0026	0.17	12.2	0.8	2	23	930	952	929	952	0.93
13	13	0.0067	0.42	10.9	0.8	1	23	1028	1051	1028	1051	0.98

Sequence Information

Coding Sequence: ATGTCGTCGACGATGGCAcaggagacgacgacgatatcggATCTCACGGAACTAGACAGCGACGGCTCGAGTTCGGAGGAGCGCGACGCTAGAAAGCGTCTTCGCGGAGATGCTGACTTCGCTGGaccgaagaagagacgaaagcAGACGACACCGGTAAGATTTTCATCGTCCTTGATGAGCGGCATGCAGGAGGAgtcgaacgaggaggaggaggaagacgtGGACAGCGAAGGTAAGCTGTCGTCGCGATCGCCGAGTCATcatcagcatcatcatcatcaccacccTTCGATCAAAGACGAGAACCTTAACAACGAGTTTCGTTGCCAATACTGCGGTCAGTTTCTCGAAAGTAAAGAGATGCTGAACGTTCATTTAGATAGCGAACACGGTGCGACGAATCAGAACACCGGTAGCCTGCAGAACAGGTCGCCCGTGTCGTCCGTGATAAAGTTAGAACCCCCGAATCAATCCGAGAGTCCTGTGAATCTTCTCAGCGTTAAAAATTTCGCCTCGAGCTGGCTAGGTCAGCAACAGCAGAACGTGCAATCGCAGACGCAGATGCAATCGCAAAACGACGAGCCCTGGCCTGGCCCGTCGAATCAACTAGCGATGAGCAATCACTTGCAAGCCCTATCAGCCTTCCCCGGTGCTCTGGCGCAGTACCTACCACTACCTACTTTTCCATTAGCAGATCCCGCTCATATTCCAAGACCGTCGATCGGTCCTGCTCCGGTTAGGATTTTCAACCCGGAGGCCTACTGCGATCTCTGTAACAAAGAATTTTGCAACAAGTATTTCCTAAAAACGCACAAAGCCAACAAGCACGGGATTTACGTGGATTCGCCTGGACCGAACACTGCCGAGAATAGCAACATTCCTCCTCAAATCTTCCCAAGTGGAGCATTTCCAGGTTCGTCGATTAAATTGGAGCCACCGGCGACCCCACCGATGCCGAGCGTGGCCTGCGACGTCTGTCAAAAGCGCTTCAAAAATGAAGAATCCATGCGGAAGCACAAGCAAAAGATGCACAACGAGTCGATGGAGCAGGCCGATCAATCTTTGCCAGCTTCTCAGAGCGAAGATGATAGAGAGACACCTCGTAGTAGTCCAGGTGGTATCGAGACCCTGTTCAAGCAGGAATATGGCATGGAGCAAGAAGATACCACGTTCATGCCCGCACCAAGACACCTGTCACCTCAATCGATCCAACAAGCCAGAGACTCTGGATTTAACGCCGATCGTTTACGTCGTCTCGGTGTCATCAATCCCGAAGCCTTCTGTGAGATCTGCTGCAAGGAATATTGCAACAAGTACTTCCTCCGCACGCACAAGATGAAAAGACACGGTATCGTTGTCCAGGATAATGAGAAATCACCGAGCAATCCTGGAGCAGCGGTCACCTGGCACCAAGTACAAACTAGCCCGTTGAATTTGATCGTTACCGAGAGTGGAAACGGATcggaatcgaacgatcgtaccAACGAGGAGTACGAGTGCAAACCTTGCGGGCTTCGTTTCCAAACGATCGGCCTTTATCAGGCACACTGTCGCAAAATGCACGAAAACGAGGAGCAAAGTTCACCCAAGCAAGAATTCGATCAAGAAACGTCCGATCAACGCACCGATTCTATTTCCGAGGATCTTCAGAAACTCCAGACGATGATCTTGCAGCTGAACGGGTTGGAATCAGCTGTGGGAAAGGGCTCGCAAAGCTGTACCATTTGCGGAAGAGAATGCGAATCGAGATCGGCTCTTCGAATGCACATGGCCACGGAGCACGGTGCTATCTCGGAAAATCCGCCATCGCCGCTTCAAGAAAAATCACCCACGAACGTCACCACGGCTTTCTGTACTCTCTGCGAAAAAGACTACGTTAGCCAGGAAGCTTTGAAGAAGCATATCGTAGAAGAACACCAGACGACGATGCCGAACCCCATGAACGTGCCACAAGTTCCTATAACCAGCTCGAACTCCATAACCAGTTCGAGTACTTCCACGACTTCCGGTAATCAAACTCAATCGGAGAAGAAGATCACGTCCATGACACCGACATCGAGCTACTGCGAAATTTGCAACAAGGAGCTGtgcaataaatatttcatgaagACGCATATGCAAAGAATGCACGGGATCGAGATTGAAAATGGTGCACAAATCGGTGGTGTGATATGTAACATCTGTAATAAGGAACTTTGCAGCAAATATTTCCTCAGAGTTCACAAGCACAATACTCACGGTATCGTAGATGAAAATACTTCTTCATCGGCCAAGCAAGAATCTTTCGACGCCTCGAGTTCCGAAGATTCGGCGTTAAAACCTGAACAACTTGGTGATCTCAGTCATCGATATTTCACGCACTTCACCGAAGTATGCCCGATCTGTAGCCGAAGGTTTCGCAGCATCAAGTGGCTGAAGGCTCATCTCCTGGGAGACCACGGGAAAACCGGTATTGATAAATGGCGCGAAATGGAGCAACAATATCAAAGTACATCGAGAACCACCGGTCGATCCTCGAACTCCTCGAAGAATACCCAACCAAGTCCGAACCTGAAGATACCCAACGGTTTCGAAGCAGCTCAGCAGCAAACCAAGTCCACGGATTACGCTGGCTTGGGAAATCAAGTGCTGTCCAATCTATTTGGTTCACCATCCGAGGATCAACAGCTGAAGAATTATCGTTGTTCTTATTGCAATTTCACGACGACTGTCTTGCCTTTCTTGTTCCTTCACGAGAGGTCTCACGTGAATCCTCAGGACAGCGTCGAGAACGATGGCACGCTTCAATGTCCGATCTGTTCTCAAGGTTTCCATCAACCCGAGCTGCTGCACCAACACCTGCTCGCCAGACATCAGTTCCCGGCTCTGCTCTCGCAATTTCAATCTCCCATACTCGGCAATCCCAAGATCGATCAGGAAAAGAGCAACGATTTGAAGGATTCACGCTCGgaggagataaaagaagatcaTCCGGTGATCGCGAAGGTTCAAATTAATCCTACGAGTCAGAACGTCTCCGATCAGATGAAAACTCAAAAACAAGACGACAATGCCGTTCAGGTAACGCCTCACGGTGCTTACAAATGCGCCCAGTGCGGATACGCGACGACGAATCTCAACAGGATCAAGAAACACGTGAGAAAGGATCACACGGCGATCGGTGATCCCACGGACAGCGTCATAGCCGAGCTGAGCAAAACTTTGAAAGATGTCGCGAACAGGCACAAAGTACCTGCTTGTTACGCCATGCCGCAAGACACCAGCACGAGTTCAGAAAAGACCATCATGCAACCGTTCCTGATCGACGAACAGGATCCATCGCAAAATGGTGATGAGTCCAGCTCGGAGAAACGATTCGTGCCGGCTCTCGTTTATTTGCCTGTTAAATCACGAATCGGCAGTGCACTGACGGCATCCTTTACCCTCACCCCCGCCTGA
Protein Sequence: MSSTMAQETTTISDLTELDSDGSSSEERDARKRLRGDADFAGPKKRRKQTTPVRFSSSLMSGMQEESNEEEEEDVDSEGKLSSRSPSHHQHHHHHHPSIKDENLNNEFRCQYCGQFLESKEMLNVHLDSEHGATNQNTGSLQNRSPVSSVIKLEPPNQSESPVNLLSVKNFASSWLGQQQQNVQSQTQMQSQNDEPWPGPSNQLAMSNHLQALSAFPGALAQYLPLPTFPLADPAHIPRPSIGPAPVRIFNPEAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGPNTAENSNIPPQIFPSGAFPGSSIKLEPPATPPMPSVACDVCQKRFKNEESMRKHKQKMHNESMEQADQSLPASQSEDDRETPRSSPGGIETLFKQEYGMEQEDTTFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIVVQDNEKSPSNPGAAVTWHQVQTSPLNLIVTESGNGSESNDRTNEEYECKPCGLRFQTIGLYQAHCRKMHENEEQSSPKQEFDQETSDQRTDSISEDLQKLQTMILQLNGLESAVGKGSQSCTICGRECESRSALRMHMATEHGAISENPPSPLQEKSPTNVTTAFCTLCEKDYVSQEALKKHIVEEHQTTMPNPMNVPQVPITSSNSITSSSTSTTSGNQTQSEKKITSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENTSSSAKQESFDASSSEDSALKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLLGDHGKTGIDKWREMEQQYQSTSRTTGRSSNSSKNTQPSPNLKIPNGFEAAQQQTKSTDYAGLGNQVLSNLFGSPSEDQQLKNYRCSYCNFTTTVLPFLFLHERSHVNPQDSVENDGTLQCPICSQGFHQPELLHQHLLARHQFPALLSQFQSPILGNPKIDQEKSNDLKDSRSEEIKEDHPVIAKVQINPTSQNVSDQMKTQKQDDNAVQVTPHGAYKCAQCGYATTNLNRIKKHVRKDHTAIGDPTDSVIAELSKTLKDVANRHKVPACYAMPQDTSTSSEKTIMQPFLIDEQDPSQNGDESSSEKRFVPALVYLPVKSRIGSALTASFTLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01513030;
90% Identity: -
80% Identity: -