Vman005856.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vespa mandarinia
Gene Symbol
Cp190
Assembly
GCA_014083535.1
Location
JACHAV010000005.1:3030404-3033240[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-14 1.6e-11 43.8 0.4 3 104 34 138 32 144 0.89

Sequence Information

Coding Sequence
ATGCAGGCAACGACTAATCGAGATAAAGCACTCCCTTCGCGAGGATTGAAGCAAGTAAAAGTGGATAATTGGGGAACTTTCTTTCTACAGAGACTTCAACAGCTTTATTTTGAAGAAGAATTACTTGATTTAACAATCAAATTTCCAACTAGTGATATTACTGTACAggcACATCGCTTAGTTATCACAACATGTACAGATTACTTTATGCAATTGGAACGtcagttaaaagaaaaagatgagaattttgatggaattattattatgccaCCAGATATGCCTTATGAGTGTGTTAAGTCTATTATtagTTTTATGTACACTGGACAATTGGAATATTGGACCTCGGAACAACACGCATTATATCGTACTGCacaaaagatgaaaatgaCAGTATTAACTAAACTGCTTGATGCTCAATTTAATACAACTGCATTACAAACAAATAGACCAGCAAAATCAAATGTTccaattattacaaaatccACGACATTGCCAACCGAAGGAACGGTAACTACAAGTACATCAACACTTTCGGCTCAACCATTACCTGGTAgaaagCTTCCaatttggaaaagaaaattagaattaCCTCCTGCAAATTATGAATTGCGAGGTTCAGCACAAAAGCCTACGGAAATCACTGCTGGGCCATCCCGATTTGATCTGCCTGAAGCAGAAGATTTTGCTCTTGGAGTTTTTTCCTCATTTgatgatattacatataatacaaaacCCATTGTTCAAGCATCAGGAAAGTACAAAAGAGATAGTTCATCACCTTCTCTTAAATGTTCTCCTGATAGAGATGTCAAGAATGATTCAacggaagatgaagaagatgataCTCAATTACATGAAAAAGATCCTAAAGAAGTAAATTCAGATGATGATTGGACAATATCGAATACATCAGAGCGATCTCAAGATGCACAACCAACACCTAAAAGAGTAAGATTTGatcttgaagaaaaagaaaacttggaAAAATCTTCATCTTGTCACACAAACGCAGACGATTCTATTAACAATCACGCAAAAATAATCAGGGaagtattgaaaaaatatccgcatttgattagaaataataaaaatatacgtttAAAGATAATGCAGAAGGAAGCGAAGTCTACAGAAACTAGTGCTCCTTGTAAAACAAAAGTTTCCTATGTGGTATTGAAATCTGATCATTTAATGTCTAGCAGTAATGGAGATGAGAATGACTCAAAGTGTAACGGTAACGTAGATGGCGGTGAGACTGGACCATGGAAATGCAATAAATGCGATTTAGATGAAGAATACACGAATTATTACATGTATAGAAGACATATGCAGGATGTGCATGAGGAAAAGTTCGATCCAAGAGTTTGTGAGCACTGTGGCTATAaagcaacaaaaagaaacattttaatgTATCATCTTTATACAAAACACAATGTGCCTCCACCAAAGAGCATGTGTTTCCCTAAATGTCAAGCATGTTCATATGTGGCTCTTTCCGAAACTTTGCTTGTGAGACAccaaataaatcataatcatcGTCCTACATCTCGGCATCATACTTCGACCTTCGAAGTAATTCAGTGTTTACAATGTTCTCAAGTTTTTAAGGATATTACTGATCTTACCACACATGAAATCAATACTGGACATGGTAATCATgtggaagggagagaaaaaggatatcGTTGTCCTCATTGTAGCAAAACTTTCGTACGTGTTACGAACTTGCAAGTTCATATCGACTGTTCTCACAAGGATCTACGAGATTCTGAAACGGCGGCAGCTGTTCCTCCAATTTCTTTAGAACCATCTTCGGAAGCAGAAGCTCTTAGTCATGTAGCAAGTGGGATAGCGACATCACTCGGAGTTGGAGATAGTGTATCACCAGAAACGCAAGAAGTAGAGAATCAATCTGAATACATAGTACCAGAAATAACTGATATTTCACAAACTACAACCTATCATGCTCATGAATTCGAAGGTCAACAGATGATCATGTTgatcaataacgataattatcaaCAACAGGACGAGaatgatcatcatcaacaaCCACAACAATTGGATATTTCTGGAAATGAACAAATTGTAATGCAAGGTACGGAAGATGGGATGATCGTGTATATTCACGATAATGatgagacagacagacaagcATATAACGATTATCAATCTATAGAGATTACACAGGAGCCAGAAGAAATAGTTGAGGAAGTTGTAGAGGAAGTAGAAGAGGCAGTAATGGAAGAAGAAGTGCAAGATGAAAGATCTGAACTTATAGATGAGAATAATTCTCATCAGATGGAAGATGGTATTCAATATGTTGAAGAACAAACTGAAATAGTTGAATATGATGAAGAACAATGTACAGAAGATAGAAGTAGAATAGAAGAATCACAGGAATCTGTTATGATTATTGAAGAGGAACATGTGGAAGGAGATGATGAAGTTACTGATGAGGTTGCTGATAAGGATAGTAATGAACAGGAATCGCCAGAAGCAAGAGATTTTGCAACTGAATGGGATGAGTATAGTAGAGATGCAATAGAATGA
Protein Sequence
MQATTNRDKALPSRGLKQVKVDNWGTFFLQRLQQLYFEEELLDLTIKFPTSDITVQAHRLVITTCTDYFMQLERQLKEKDENFDGIIIMPPDMPYECVKSIISFMYTGQLEYWTSEQHALYRTAQKMKMTVLTKLLDAQFNTTALQTNRPAKSNVPIITKSTTLPTEGTVTTSTSTLSAQPLPGRKLPIWKRKLELPPANYELRGSAQKPTEITAGPSRFDLPEAEDFALGVFSSFDDITYNTKPIVQASGKYKRDSSSPSLKCSPDRDVKNDSTEDEEDDTQLHEKDPKEVNSDDDWTISNTSERSQDAQPTPKRVRFDLEEKENLEKSSSCHTNADDSINNHAKIIREVLKKYPHLIRNNKNIRLKIMQKEAKSTETSAPCKTKVSYVVLKSDHLMSSSNGDENDSKCNGNVDGGETGPWKCNKCDLDEEYTNYYMYRRHMQDVHEEKFDPRVCEHCGYKATKRNILMYHLYTKHNVPPPKSMCFPKCQACSYVALSETLLVRHQINHNHRPTSRHHTSTFEVIQCLQCSQVFKDITDLTTHEINTGHGNHVEGREKGYRCPHCSKTFVRVTNLQVHIDCSHKDLRDSETAAAVPPISLEPSSEAEALSHVASGIATSLGVGDSVSPETQEVENQSEYIVPEITDISQTTTYHAHEFEGQQMIMLINNDNYQQQDENDHHQQPQQLDISGNEQIVMQGTEDGMIVYIHDNDETDRQAYNDYQSIEITQEPEEIVEEVVEEVEEAVMEEEVQDERSELIDENNSHQMEDGIQYVEEQTEIVEYDEEQCTEDRSRIEESQESVMIIEEEHVEGDDEVTDEVADKDSNEQESPEARDFATEWDEYSRDAIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01512488; iTF_01512298; iTF_01513112; iTF_01514278; iTF_01514469; iTF_01233279; iTF_01233122; iTF_01090112; iTF_01090310; iTF_01235362; iTF_01232513; iTF_01233995; iTF_01234669; iTF_01234480; iTF_01235158; iTF_01233787; iTF_01513600; iTF_01513799;
90% Identity
iTF_01514278;
80% Identity
iTF_01513112;