Vman012025.1
Basic Information
- Insect
- Vespa mandarinia
- Gene Symbol
- dsx
- Assembly
- GCA_014083535.1
- Location
- JACHAV010000015.1:3334445-3355581[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 1.1e-13 50.3 13.5 3 46 27 70 26 71 0.96 2 2 3e-21 9.4e-18 63.3 12.6 2 47 181 226 180 226 0.98
Sequence Information
- Coding Sequence
- ATGGATCACGTGGATCAATCAAGTGCACGTACGGAGAATAACGCGTCCTCGAACATGTCTGTAGGTTCGCGAATAACGAGGAATTGTTCGCGATGTCGAAATCATGGACAAAAAATTGCCCAGAAGGGCCATGGAAAAGATTGTAAGTACCGCGATTGCGTCTGTGAACGTTGTAAACTTTTTTCCGATCGACGAAGCATGATGGCCCGGCATAATGAAATGAGAAGAACTATGGCTCAAGACGAGGATTCAACATCACTCTCCATAGATGGATCCTCGCTCGGTTCAGGTCCGCAATCGGTGAAGAATCTCGAGGGAAGTTACGACAGCAGCAGTGGCGACTCACCAATCAGCAATCACGGAAGCAACGAAACTCAGGACGGGAACAGCGACGTTGCCGGAATTGCTTCCTCAAAAAAGGCACCGTCTTCAAATCGTTCGCCAGCCACAACGTCCTGGCCACAATGGCAGGCCGGGGCGGATTCAAATGCATCTTGGGACGCATCCTCAACCTCGAACAGCGGCACCAATTCACGTACGAAACCGACGTGCACACGTTGCCGTAATCATGATGTTACTAGCATTCTTAAGGGTCACAAGAGGTACTGCGACTTTATTTACTGTCATTGCCCCAAATGCCGTAACACGCTTAAGCGGCAAAAGCAAATGGCAAAACAAACCGCACTTAAAAGGGCTCTTATACAAGACGAGGAACAGATAAGAAAGTATGGCAAGTTGGTGATGCCAGCGATGCCTCCAGTAGAAAACAAGCATGTACCAACTGTTCCTCAACCAGCGTGGAACATCGAAGGCAGTTACGGTGGCATCAATGGCGTACTTAATACTCCAACTCCAAGAAAATTGCCAGTCGTAGATACGCATTTGCCTTCTTCGATTCATCAGATTCAACCACAACCTAGCACCAACGTTGAAATTGTATTGGCACACAGTACGAATCTCCTGCAACGATTCCGATATCCTTGGGATATGTTAACACTAATGTATGTCACAGTGAAGTATGCCGGTGCAAATCTTGACGAGGCTCTCAGACGTATCGAGGAAGTTAAACATTGGATACCGGACGTTTactcaatattaattatatatataaagaaaaattttttattactcttatacaTTGCTTTTGTTATATGcacttattattcaaaaattgAGAAGAATTTCGAACGCGactttaataacattaataataatttatttatgactTctaatgataatattactattgtcgTTGAAGTTGGCAAAGTTTGGCAAAGTTTCAAGTAA
- Protein Sequence
- MDHVDQSSARTENNASSNMSVGSRITRNCSRCRNHGQKIAQKGHGKDCKYRDCVCERCKLFSDRRSMMARHNEMRRTMAQDEDSTSLSIDGSSLGSGPQSVKNLEGSYDSSSGDSPISNHGSNETQDGNSDVAGIASSKKAPSSNRSPATTSWPQWQAGADSNASWDASSTSNSGTNSRTKPTCTRCRNHDVTSILKGHKRYCDFIYCHCPKCRNTLKRQKQMAKQTALKRALIQDEEQIRKYGKLVMPAMPPVENKHVPTVPQPAWNIEGSYGGINGVLNTPTPRKLPVVDTHLPSSIHQIQPQPSTNVEIVLAHSTNLLQRFRYPWDMLTLMYVTVKYAGANLDEALRRIEEVKHWIPDVYSILIIYIKKNFLLLLYIAFVICTYYSKIEKNFERDFNNINNNLFMTSNDNITIVVEVGKVWQSFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01514840;
- 90% Identity
- -
- 80% Identity
- -