Vman002218.1
Basic Information
- Insect
- Vespa mandarinia
- Gene Symbol
- Usf1
- Assembly
- GCA_014083535.1
- Location
- JACHAV010000001.1:45987-48700[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.049 3.1e+02 1.1 0.0 11 38 161 189 160 195 0.82 2 2 1e-07 0.00063 19.3 0.6 17 46 241 270 238 275 0.94
Sequence Information
- Coding Sequence
- ATGACCTCGTTGCCGCGTCCCGTGACCAGCTCACGTGAATTTTGGCAAATTCAAACATTTTTGGTGGAAAATATGGACATTTTGGATCAGCACCTTCAACAACAGGATGTCAGCACCGTTGGAACAAAGGATGAATCTGGAACAGGAATAGTTATTGAAGAAGCAGAGATTGTTGATTGTGAAGCAGAAGCAGTTGGAGATGATGGAATGCGATATCAGGAAGCACTTGCTTATAGAGTGGTTCAAGTAAATGGTACGTCAAGCAGTAATGAAATAGAACTGCCTGTAGGACAACCAGGAAGCAATACTGTACAAGTTTTAACGTCTCCTTTGAATGGACAGTTTTATGTCATTGGCAATGCTAATGATGTTTTCACTACTGCTCAAACGTCTAGGTCATTAGTTCCAAGGACTACTCTTCAAATAGAAACACCAAGAAATTGTACTACTGGTTTAAAGAAGAGAGACGACAGAAGAAGAGCAACGCACAATGAAGTTGAACGTCGGCGtagagataaaattaataattggaTTGCAAAattaggaaaaataatacCTGAATGTAATGCCACGACCAATACTAGCGCAGGCGGTAATAGTGGAGAGGGAAAGGCAAATTATGAAACGCAGAGCAAAGGAGGGATTTTAGCGAAGGCTTGTGAGTACATAGGCGAATTACGTGCAGCAAATCAGGGCTTGGGTCAATGTTTacgagataatgaaaaattaagacAGGAAATAACTGCCTTAAAACAGCTGATTTCGCAATTAAAACGCGAAAACCTTCAGCTTCGAACACAGTTGTCTTCATCTTCAGGGACAAGTGCTGATGTCCATTTGAGTTCGTAA
- Protein Sequence
- MTSLPRPVTSSREFWQIQTFLVENMDILDQHLQQQDVSTVGTKDESGTGIVIEEAEIVDCEAEAVGDDGMRYQEALAYRVVQVNGTSSSNEIELPVGQPGSNTVQVLTSPLNGQFYVIGNANDVFTTAQTSRSLVPRTTLQIETPRNCTTGLKKRDDRRRATHNEVERRRRDKINNWIAKLGKIIPECNATTNTSAGGNSGEGKANYETQSKGGILAKACEYIGELRAANQGLGQCLRDNEKLRQEITALKQLISQLKRENLQLRTQLSSSSGTSADVHLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01119990;
- 90% Identity
- iTF_01513187;
- 80% Identity
- iTF_01512561;