Basic Information

Insect: Venustoraphidia nigricollis
Gene Symbol: stc
Assembly: GCA_034508555.1
Location: JAVRKA010000048.1:3880612-3898381[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 2.7e+04 -4.4 1.6 15 19 553 557 552 557 0.81

2 16 0.23 3.1e+03 -1.1 0.8 4 10 586 592 585 592 0.95

3 16 1.2e-05 0.16 12.6 16.0 4 18 603 617 601 618 0.93

4 16 2.5e-08 0.00033 21.1 11.5 3 18 656 671 654 672 0.92

5 16 1 1.4e+04 -3.2 0.6 6 10 702 706 701 706 0.92

6 16 2.8e-09 3.7e-05 24.2 12.4 1 18 712 729 712 730 0.97

7 16 7.7e-06 0.1 13.2 13.6 4 18 779 793 772 794 0.86

8 16 1.6 2.2e+04 -3.8 2.0 5 10 823 828 823 828 0.93

9 16 0.0013 17 6.1 7.9 1 11 834 844 834 845 0.96

10 16 0.5 6.7e+03 -2.2 0.5 4 10 849 855 848 855 0.91

11 16 2.6e-10 3.4e-06 27.5 12.5 1 18 861 878 861 879 0.97

12 16 0.62 8.3e+03 -2.5 0.7 5 10 907 912 907 913 0.88

13 16 2 2.7e+04 -5.4 10.0 10 19 926 936 915 936 0.76

14 16 1.5 2e+04 -3.7 0.6 5 10 961 966 961 966 0.79

15 16 4e-07 0.0054 17.3 10.0 1 16 972 987 972 997 0.87

16 16 4.7e-06 0.063 13.9 13.0 3 19 1005 1023 1004 1023 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	2.7e+04	-4.4	1.6	15	19	553	557	552	557	0.81
2	16	0.23	3.1e+03	-1.1	0.8	4	10	586	592	585	592	0.95
3	16	1.2e-05	0.16	12.6	16.0	4	18	603	617	601	618	0.93
4	16	2.5e-08	0.00033	21.1	11.5	3	18	656	671	654	672	0.92
5	16	1	1.4e+04	-3.2	0.6	6	10	702	706	701	706	0.92
6	16	2.8e-09	3.7e-05	24.2	12.4	1	18	712	729	712	730	0.97
7	16	7.7e-06	0.1	13.2	13.6	4	18	779	793	772	794	0.86
8	16	1.6	2.2e+04	-3.8	2.0	5	10	823	828	823	828	0.93
9	16	0.0013	17	6.1	7.9	1	11	834	844	834	845	0.96
10	16	0.5	6.7e+03	-2.2	0.5	4	10	849	855	848	855	0.91
11	16	2.6e-10	3.4e-06	27.5	12.5	1	18	861	878	861	879	0.97
12	16	0.62	8.3e+03	-2.5	0.7	5	10	907	912	907	913	0.88
13	16	2	2.7e+04	-5.4	10.0	10	19	926	936	915	936	0.76
14	16	1.5	2e+04	-3.7	0.6	5	10	961	966	961	966	0.79
15	16	4e-07	0.0054	17.3	10.0	1	16	972	987	972	997	0.87
16	16	4.7e-06	0.063	13.9	13.0	3	19	1005	1023	1004	1023	0.92

Sequence Information

Coding Sequence: ATGGCCCACTGGAATCCATTATATGGTGCATCACCAAACCAAAATCCTTCATATTTTTCAAACGAAGAACAAACGGAAAGAACTGAATTGCCATTTTTTAATGCAGAAAATAATGGTTTCAATTATCCCAATAACTACCAGTCTGTAAATTATAGTGGATATTTTACACCAAACGGTATAAACCCAGCATTTCCGAACGTAAATTATAATAACtcttatttaaatgtttatccGGTTCAACGTTTAGATTCGCAGCAAATTCGATATTTACAAAGCTTCACAACTAATAATCAAATAAGTCAAAATGTAAAAGAAATTTCTAACGCAACACCAagtttcaatgaaaaatctAGTAATATTGCCTCAAATAATGAACGACcaaattcaaagaaaaacgCTTACACCAGGAATAATCCTGTTTTCAACGAGAGAAAAGACAATTTTGAGgaaaacaaaactgaaaaattgttatttaaaaatccTGAGAACTTTTCAGATACTAAATTAAACAGTTCAGAATTAAATGTAGATTTAGTTAAAACATCTACTTTAACTGCAACTGCTGCAGAGTTTAGGCCAGGCAGTAGCAAAGACAGCGAGGTCATTACTCAAAATGATCAGCAGAAAAGTAACACTGGTGCtattaaaaaatccaaaaagaATAGTTTGATCActgattttaaagttaaaaagtaTTCTGGAGGTCAATCGTACCAAGACAGGAATTATATTGAATCCAGAACGTTTCGATCAGAAACTGATAATTCACGAAACTTGCAACAATTCAGTGGTGACGCTTCTTACAACAAGAAATATTCTAAATCATATACAAACGATAATAGATATAATTCATACcgcaaaaatgaatattttaaaccaAAATTTGATTCAAATGATTTTAAACGAAGTGATCAATCTGAAAATTACCGAAATGCTAGAAGTGACTATAGAAATAGTAGAAATAATAGTCAAGAGTCTGATAGAAATGAGCATAGAAGTAATAGAAACAGCAATTATGATGTAGAAAGAAATGTGGATAGTAAAAAAGTACCTGGCGACAATGAGAAAACTCAGCCAAACTATTTTAACAATCCAAACAGCTCTGATAGCTGCTCGAATTGGAGGAGTGAACCAAGATCAAATGATGACAATACcagaaacaataaatttaataacagaTATGATAGAAAATCAAATACAAATGATAAtagtagaaattttaaaaatgaaactcAAATATATTCCTCTAGGAAAGCAAATTACAACAACAGATATAATGATAATTCTAAAAGATCTAGTTCAAAGAATTTATCACAAAATAGTGCTAGGTTTTATAGTGATAAATCGCACAACAATAAAGCTTCCAGGAATAATGATAATTACAACAAAGAAAGTCATGGGAACTCTTCTAATAAGCAAGAAAATAAAAAGTCGTCCGTCGATCATAAGAAGAATGATAAATTGAGCGATGCAGTGTCTCAGCGAGAGCGCCTGATGCAACAAGTGACGAGAGGCACACTAGAATGTCTTGTCTGTTGTGAACGCGTTAGACCTGTTGATCCTGTTTGGTCGTGTCAAAACTGCTATCACATATTACATTTACGCTGCATTCAAAAATGGGCTACTTCATCAACTCAAGCCAATGTTGGTTGGCGTTGTCCAGCCTGTCAACATGTCAGCAAAGACATTCCATCTGAGTACAGATGTTTCTGTGGCTCTGTCCGGGAACCCCAGTACAATATAGCGGACGTGCCGCATTCTTGTGGGGAAACTTGTGGCAGGAAGTCTCGACGAATCAAGTGTCCTCACCGTTGCACTGTTCTATGTCATCCTGGCCCTTGTCCTCAGTGCGAAATATTCGTTACAagGTCGTGTGGCTGTGGAAAGACAGAACAAACTGTGCCTTGTAATCGTGAAGAAACTCTAAGCTGCGGTAAATTGTGTGATAAAATGTTGAACTGTGAAGTCCACAAATGTCAGAGACTATGTCACGAAGGTGATTGTGAGCCCTGCGCGGAAAAAGTGATCCAAGtttgttaCTGCGGGAAATCGAAACAAGAACTCGATTGCACAGcggaaactaaaaatataacgaaATATCACTGCAACGAAGTGTGCAGCCGTACTTTGACTTGCGGAAATCACGAATGTGCTCGTCTCTGCCACGAAGGAGACTGCGGCAACTGTGAGTTGTCTCCGACTCTGGTAGACACGTGTCCTTGCGGACAGACGCCTCTGACAGAGGATCAAAAACGTACATCGTGCCTTGATCCAATTCCTTGCTGCGATAAGatatgttCAAAGAAATTGAAATGCGGCCAGCCAGTCAGTCCACACCAATGTCTGGCCAAGTGCCATTTAGGTCCGTGCCCTCCGTGTGAATTAAGCACTTTGGTACGATGCCGATGCGGTCACATGGACCGGGAGTTGCCTTGTATCCAACTCACCGGAAGACCTGATGATGCTCGCTGTGAGAAGAAATGCAACAAGAAACGATTGTGCGGTCGACACAAGTGTAATCAAATGTGTTGCATTGAAGTGGACCACGAGTGTCCTCTAATTTGCAATCACATGTTATCGTGTGGTCAGCATAGATGCGACCAACTATGTCACCGGGGACGTTGCCAACCGTGCTATCGATCgaGTTTCGAAGAGTTGTATTGTGAGTGTGGAGCAAGCGTGATTTATCCTCCGGTGGCGTGTGGAACCAGAAGACCGACATGCGACAAGCCTTGCAGTAGGACTCACAATTGTGATCATCCAGTGTCACATAATTGTCATAGTGAAGCCGAGTGTCCTCCGTGCACAGTTTTTACGCATAAATGGTGCCACGGTCAACATGAGATGAGGAGGACGATACCATGTCACATTGAAAATTTCACGTGTGGTCGTCCTTGCGGTCGAGAATTACCATGCGGTAGGCATAAATGTCTTTTGATTTGCCATGCCGGACCATGTTTAGCCGACGGACAGACTTGTACGCAACCGTGTACTACGCCACGGGCTTCTTGTACTCATAATTGCGCTGCACCCTGTCACGAAGGAGATTGTCCGGATACGCCTTGTAAAGAATCAGTAAAAGTATCGTGTCAATGCGGACATCGATCTACGATGAGATCGTGCGTGGACAATGCTAGAGAATACCAGCGTATTGCCACTGCAATGTTAGCTTCAAAGATGACCGATATGCAGTTGGGTCATTCAATTGATATTGGGGATATTGTTGGAAACACTAATGCCAAAAAACAGGCTAGTCTTAAAACTTTAGAATGTAATGACGAGTGTCGATTAATTGAGCGTAACAGACGTCTAGCTATAGGGCTTCAAATACGGAATCCCGATCTGAGCGCTAAATTGACTCCGCGTTATTCAGATTTTTTGAAACAGTGGGCTAAGAAAGATTCTCGGTTTGTTCAGATGGTGCACGATAAATTGACGGAGCTTGTTCAGTTAGCTAAACAGTCGAAACAAAAGTCTCGCAGTCATTCCTTCGATATAATGAATCGTGACAAACGGCAATTCATTCACGAATACTGTGAACATTTTGGCTGTGAATCGGCTGCCTATGACCAGGAGCCCAATCGTAATGTAGTCGCTACGGCGTGTAAAGACAAGGCATGGCTCCCAAGTCTTAGTTTATTAGAAATTCTTCAGCGAGAATCGGGTCAACGGAAAGTTCCCGGTCCAATGCTACGATCTGCACAGAGCAAAACTACAGGAACATCAGAAAGTGTAACACTTCGTCTTCCTAGTCGTGACAAACTAACCGCCGCGCCTTCGACTCAATCAACTCCACCAGAAGAGGACTACATAGATTATTTCAATTGTCCTCCCGAATAA
Protein Sequence: MAHWNPLYGASPNQNPSYFSNEEQTERTELPFFNAENNGFNYPNNYQSVNYSGYFTPNGINPAFPNVNYNNSYLNVYPVQRLDSQQIRYLQSFTTNNQISQNVKEISNATPSFNEKSSNIASNNERPNSKKNAYTRNNPVFNERKDNFEENKTEKLLFKNPENFSDTKLNSSELNVDLVKTSTLTATAAEFRPGSSKDSEVITQNDQQKSNTGAIKKSKKNSLITDFKVKKYSGGQSYQDRNYIESRTFRSETDNSRNLQQFSGDASYNKKYSKSYTNDNRYNSYRKNEYFKPKFDSNDFKRSDQSENYRNARSDYRNSRNNSQESDRNEHRSNRNSNYDVERNVDSKKVPGDNEKTQPNYFNNPNSSDSCSNWRSEPRSNDDNTRNNKFNNRYDRKSNTNDNSRNFKNETQIYSSRKANYNNRYNDNSKRSSSKNLSQNSARFYSDKSHNNKASRNNDNYNKESHGNSSNKQENKKSSVDHKKNDKLSDAVSQRERLMQQVTRGTLECLVCCERVRPVDPVWSCQNCYHILHLRCIQKWATSSTQANVGWRCPACQHVSKDIPSEYRCFCGSVREPQYNIADVPHSCGETCGRKSRRIKCPHRCTVLCHPGPCPQCEIFVTRSCGCGKTEQTVPCNREETLSCGKLCDKMLNCEVHKCQRLCHEGDCEPCAEKVIQVCYCGKSKQELDCTAETKNITKYHCNEVCSRTLTCGNHECARLCHEGDCGNCELSPTLVDTCPCGQTPLTEDQKRTSCLDPIPCCDKICSKKLKCGQPVSPHQCLAKCHLGPCPPCELSTLVRCRCGHMDRELPCIQLTGRPDDARCEKKCNKKRLCGRHKCNQMCCIEVDHECPLICNHMLSCGQHRCDQLCHRGRCQPCYRSSFEELYCECGASVIYPPVACGTRRPTCDKPCSRTHNCDHPVSHNCHSEAECPPCTVFTHKWCHGQHEMRRTIPCHIENFTCGRPCGRELPCGRHKCLLICHAGPCLADGQTCTQPCTTPRASCTHNCAAPCHEGDCPDTPCKESVKVSCQCGHRSTMRSCVDNAREYQRIATAMLASKMTDMQLGHSIDIGDIVGNTNAKKQASLKTLECNDECRLIERNRRLAIGLQIRNPDLSAKLTPRYSDFLKQWAKKDSRFVQMVHDKLTELVQLAKQSKQKSRSHSFDIMNRDKRQFIHEYCEHFGCESAAYDQEPNRNVVATACKDKAWLPSLSLLEILQRESGQRKVPGPMLRSAQSKTTGTSESVTLRLPSRDKLTAAPSTQSTPPEEDYIDYFNCPPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01531646;
90% Identity: iTF_01531646;
80% Identity: -