Vnig001610.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- kn
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000003.1:1527600-1544899[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-130 6.8e-126 421.5 23.6 208 571 13 373 8 383 0.79
Sequence Information
- Coding Sequence
- ATGTTTGATATCACAATTGACACGGGTTTCTATTTGTTTCAGGTGGTGATAGCAACCCAAGTGGCAGTCGACGGACCACTTTTAGCCATATCCGACAACATGTTTGTGCACAATAATTCGAAACACGGGCGGAGAGCGAAAAGACTTGACCCCGCCGaagGCTTGTACCCTCCTCTACCCGTAGCGACACCTTGCATCAAAGCGATCAGTCCAAGCGAAGGATGGACTTCAGGTGGATCAACGGTCATCATCGTTGGCGACAATTTCTTTGACGGACTTCAAGTCGTTTTTGGGACCATGCTCGTTTGGAGTGAGTTAATAACGCCACACGCGATCCGAGTTCAAACTCCGCCAAGACACATACCAGGTGTCGTCGAAGTCACACTTTCCTACAAATCTAAACAGTTTTGCAAGGGCGCGCCAGGGCGATTTGTCTATGTTTCTTTAAACGAGCCAACGATAGACTATGGATTCCAAAGATTACAAAAGTTAATACCGAGGCATCCTGGAGACCCTGAGAAATTACCTAAGGAAATAATTCTAAAACGCGCTGCTGACTTAGCGGAAGCGTTGTACAGTATGCCGCGAAACAACCAGTTGGCGCTATCAGCGCCTCGATCTCCTTCGATGGGCAACAACGGCATGACCGCAGGATTCAACACTTATACAGGCCAGTTAGCTGTCAGCGTGCAGGACACCGGAAACGGTCAGTGGACTGAAGAGGAGTACGCTCGTGGTCAGAGTAGCAGCGTGTCACCGCGAGGTGGTGGTTATTGTTCGAGTGCTTCAACACCGCATTCATCCAACGGTGGTTCGTATGGCGGCACTACTTCTGGCACAACGGTAGCTTCGTCCGCCGCGGCTATGAACGGCTATGGTTCTGCCACACCGGGCAACATGGGATTACCTGGTTCACCGGCTGGCGGGCTTTTCAATTCGTCGTCAATTTCCCCCGAATCGCAGACTTGTCATTACAATCAACATTTTGGCAGTAAAGGATCAAAATCCTCTAACGGTGCAGGTAGTGTGGAAAAAAGCGCCTTTGCACCCGTGGTAAGATCAAACGCGCCAACGACGCCGCCGCTTTTCCCTCACAATACAACAGCGCACGACAACTCTCACAACACAACAACGTCACATCATCCCCCGACAGGTCCGGCACATTTTCATCATCACTCCATGACCGGCTGGCATCATTTAGTTGTACAGTGTTAG
- Protein Sequence
- MFDITIDTGFYLFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLALSAPRSPSMGNNGMTAGFNTYTGQLAVSVQDTGNGQWTEEEYARGQSSSVSPRGGGYCSSASTPHSSNGGSYGGTTSGTTVASSAAAMNGYGSATPGNMGLPGSPAGGLFNSSSISPESQTCHYNQHFGSKGSKSSNGAGSVEKSAFAPVVRSNAPTTPPLFPHNTTAHDNSHNTTTSHHPPTGPAHFHHHSMTGWHHLVVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039014;
- 90% Identity
- iTF_01529866;
- 80% Identity
- -