Nbre020875.3
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- kn
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000643.1:90736-105760[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-125 1.3e-121 407.7 22.5 205 515 1 323 1 354 0.77
Sequence Information
- Coding Sequence
- ATGAGAAGGTTTCAGgTTGTCATAGCAACGCAAGTAGCCGTAGATGGTCCCCTGTTGGCCATTTCGGATAACATGTTCGTACACAATAACTCAAAACACGGAAGAAGAGCGAAACGACTCGACCCTGCTGAAGGTCTGTACCCTCCTTTGCCAGTAGCGACGCCATGCATCAAAGCCATAAGTCCAAGCGAAGGTTGGACATCAGGCGGTTCGACAGTGATCATAGTGGGCGACAACTTCTTCGACGGTTTACAAGTTGTGTTTGGAACGATGCTCGTGTGGAGTGAGTTAATAACACCGCACGCAATAAGAGTACAGACGCCGCCGAGACATATACCGGGTGTCGTCGAAGTGACGCTCTCATATAAAACGAAGCAATTTTGCAAGGGGGCGCCCGGTAGATTTGTTTATGTCTCACTTAATGAACCTACAATAGACTACGGATTCCAGCGACTACAAAAGCTCATACCCCGGCATCCTGGCGATCCAGAAAAATTACCAAAGgAGATAATATTGAAGAGAGCTGCAGATTTAGCGGAAGCCCTGTACAGTATGCCACGCAATAATCAATTGTCATTATCGGGACCACGATCGCCTAGTATGGCGAATAACGGAATGTCCGGTGGATTCAATACGTATACGGGACAGTTGGCTGTGAGCGTGCAGGACACCGGAAACGGTCAGTGGACTGAAGAGGAATACGGCCGTACACAGAGTAGCAGTGTGTCGCCACGTGGCGGAGGCTACTGTTCGAGTGCGTCCACACCGCACTCGTCCAATGGCGGTTCGTACGCCGGCGGTACTGGCACCACGGCGGCCGTCCCCAGCTCAGTACCCGCCATGAACGGGTATGGTGCGGCGACACCTACATCCGGTTCACAAATCGCAAACATGCTACCTGGTTCACCGTCCGGCGGTTTATTCAATTCAACATCGAGAGCAATGAGCAGTCTGGTATCATCTCCGTTCGCAACAATGAACCCATTCGCATTGCCCACATGCAATTCACAGGGGTACGGGTCCAGTTCGCTGGTAAGCTCGATGAGGGCATATACATTAGACAGTAATAGAAGCGATAAGAATCTAGAGATTGAGTGCCTAGATATTCGTAAAGGGCCCGACAAACTGGATGATCTTTTACAGGCGAAACTCAGTGTCACCGGCATAATTTGTACTTAA
- Protein Sequence
- MRRFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSGPRSPSMANNGMSGGFNTYTGQLAVSVQDTGNGQWTEEEYGRTQSSSVSPRGGGYCSSASTPHSSNGGSYAGGTGTTAAVPSSVPAMNGYGAATPTSGSQIANMLPGSPSGGLFNSTSRAMSSLVSSPFATMNPFALPTCNSQGYGSSSLVSSMRAYTLDSNRSDKNLEIECLDIRKGPDKLDDLLQAKLSVTGIICT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510252; iTF_01529866;
- 90% Identity
- -
- 80% Identity
- -