Vnig014033.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- Bgb
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000042.1:2871384-2890924[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-34 5.2e-30 104.8 0.2 94 164 24 94 20 97 0.95
Sequence Information
- Coding Sequence
- ATGCAGGCGTCCTTATTCAATACGATTCTGGATGTATTTTTTCAGTGTACATCATTAACACTGATGTTGGTTCACATTAGATCGCATCTAATAATGAACGGTGTCTGTGTGCGCTGGCGCGGCTGGATCGACCTGGAGCGTCTGGACGGCGTCGGGTGTTTGGAATTCGCTGAGGAACGTGCTGCGCAAGAGGATGCGATGCTGCGCGAACAAATCGAACGCTACAATCAGCGACTGCGCGACTTCGAGGATAAACAGAGAGCTTACAGCCGCGGCCAGCATGAACGAGCTGATCAAGAATTGGAGTTGCGAATGGCAAGCAGTCTTCATGGAGGTCATCATGGCGGACACCACGTAGCCGGCGCGGCCGCTCACCACGCAGGAGGAGGCGTCAGTAGCCGTTGTCACGGACCGGTGCCCCCCCGACACGGACTGCCACTGCAAGTAGGCCTTCCTCTTACGCCGCCATAA
- Protein Sequence
- MQASLFNTILDVFFQCTSLTLMLVHIRSHLIMNGVCVRWRGWIDLERLDGVGCLEFAEERAAQEDAMLREQIERYNQRLRDFEDKQRAYSRGQHERADQELELRMASSLHGGHHGGHHVAGAAAHHAGGGVSSRCHGPVPPRHGLPLQVGLPLTPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01060403;
- 90% Identity
- iTF_01050150;
- 80% Identity
- -