Basic Information

Insect: Venusia cambrica
Gene Symbol: -
Assembly: GCA_951394065.1
Location: OX596053.1:4650642-4653317[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00023 0.41 11.4 2.6 5 38 70 99 66 99 0.91

2 10 0.022 40 5.0 2.7 11 29 104 120 98 130 0.77

3 10 4e-05 0.071 13.8 0.5 5 38 125 155 121 159 0.88

4 10 0.2 3.6e+02 1.9 0.5 18 38 165 182 162 189 0.85

5 10 0.014 24 5.7 1.1 14 40 193 216 182 219 0.74

6 10 0.098 1.8e+02 2.9 1.6 3 40 211 244 209 247 0.83

7 10 0.14 2.5e+02 2.5 0.2 18 28 253 263 250 274 0.83

8 10 0.082 1.5e+02 3.2 2.5 8 38 272 298 263 302 0.79

9 10 0.00018 0.32 11.7 1.1 16 41 307 329 299 332 0.90

10 10 8.7e-07 0.0016 19.1 2.5 12 44 331 360 328 360 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00023	0.41	11.4	2.6	5	38	70	99	66	99	0.91
2	10	0.022	40	5.0	2.7	11	29	104	120	98	130	0.77
3	10	4e-05	0.071	13.8	0.5	5	38	125	155	121	159	0.88
4	10	0.2	3.6e+02	1.9	0.5	18	38	165	182	162	189	0.85
5	10	0.014	24	5.7	1.1	14	40	193	216	182	219	0.74
6	10	0.098	1.8e+02	2.9	1.6	3	40	211	244	209	247	0.83
7	10	0.14	2.5e+02	2.5	0.2	18	28	253	263	250	274	0.83
8	10	0.082	1.5e+02	3.2	2.5	8	38	272	298	263	302	0.79
9	10	0.00018	0.32	11.7	1.1	16	41	307	329	299	332	0.90
10	10	8.7e-07	0.0016	19.1	2.5	12	44	331	360	328	360	0.93

Sequence Information

Coding Sequence: ATGTTCTTCTATTTCAGTATAAAGCTAGAGAGATACGACGATTGGGATATATCTGCAGAAAATGACCTGCCCGTCAGTCTTGCGTCAGTCAAGTGTGAAGTGACTCACGGCGTCAAACAAGAGCCATTTGAAGAACAGccgGGCTACGAACATAATGGACACCAGTCGAATGAAAACTCGGAATACATTGATGACAGCGCCGCTTCGGAACACTTCCTGGCATTCTCGACCGATAACAAATACAACTGCAAAATTTGTTGCAAATCGTTCGCCAGCGGCACCAACTTAACCAGACATGAATTAATACACACACGCGTCAAACTAGAGTGTCAAATATGCGGGAAACGGTATGTCGGACAAGATCTATATAACAAACATATGGAAAAACACAATTTACCCGGAAAAATGTTCCCTTGCGagatatgtgaaaaaaaattcaagtcCTCCTCAAATTTACTACAGCACAAAAGAGTTCATTTGCCTAAAGGGTACCAATGCAATGTGTGCTTAAAGTCGTTCACGATAAAGGCTAATCTAGCTCGACACCAGGGGAGGTCTATTTGCAAACCCGTCGACAACAAACCGCTAATATGCGAGTTTTGCAACAAAGTGTTCGAGAAATCGTTTCTGTTAAAATCACATTTGAGAAAACACGACACCGATAGGCCTTACCAATGCGATCTGTGCGggctacattttaaatataaaagtgCTATCATTCGACATATACAGTACCATTCCGGTTTCAAACCCCACAAGTGTCCGTATTGCGATAAAACGTTTACGCACCCGGGTTTGATAAAGCCACACTTGCGAACGCACACCAAAGAGAAACCTTACCAATGCACCATTTGCTTCAAAAAATTCGCGCACAAGCAAAATATGGAGCGACATAAAATCAACCACGGGAGGATCAAGCGTCTCGTGTGCGACATATGTCACAAGAAGTTTCCGAGGGAATCTCGCTTGATATATCACATGAAGACGCACACGCGGGAGAAGTTCTTCGATTGCGAACATTGCGGGAGGCAGTTCACGCACAAGTCGAATGTGATGCGACACTTTGAGAGGAAGCACCCAGGGTTCACGTACCAGGGGACCGACACCGATGCGAAGGTGGCTCTCAGGGTCtgggataaggtcaaaggtcTGCTGCGGCCACACTACGATGTGTATCAACAGCCCGAGgagattttagggtag
Protein Sequence: MFFYFSIKLERYDDWDISAENDLPVSLASVKCEVTHGVKQEPFEEQPGYEHNGHQSNENSEYIDDSAASEHFLAFSTDNKYNCKICCKSFASGTNLTRHELIHTRVKLECQICGKRYVGQDLYNKHMEKHNLPGKMFPCEICEKKFKSSSNLLQHKRVHLPKGYQCNVCLKSFTIKANLARHQGRSICKPVDNKPLICEFCNKVFEKSFLLKSHLRKHDTDRPYQCDLCGLHFKYKSAIIRHIQYHSGFKPHKCPYCDKTFTHPGLIKPHLRTHTKEKPYQCTICFKKFAHKQNMERHKINHGRIKRLVCDICHKKFPRESRLIYHMKTHTREKFFDCEHCGRQFTHKSNVMRHFERKHPGFTYQGTDTDAKVALRVWDKVKGLLRPHYDVYQQPEEILG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509813;
90% Identity: iTF_01509813;
80% Identity: iTF_01509813;