Vtam014440.1
Basic Information
- Insect
- Vanessa tameamea
- Gene Symbol
- ZNF711
- Assembly
- GCA_037043105.1
- Location
- CM073296.1:1043903-1051119[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0023 0.17 12.9 1.8 2 23 72 93 71 93 0.96 2 12 0.033 2.4 9.2 1.8 3 23 101 122 99 122 0.94 3 12 0.14 10 7.2 0.2 2 23 130 152 129 152 0.88 4 12 4.4e-05 0.0032 18.3 2.7 1 23 158 180 158 180 0.95 5 12 0.0011 0.079 13.9 7.3 3 23 188 208 186 208 0.90 6 12 0.00061 0.044 14.7 1.6 1 21 214 234 214 235 0.96 7 12 0.34 25 6.0 1.1 3 19 254 270 253 275 0.91 8 12 1.7e-06 0.00012 22.7 1.5 1 23 567 589 567 589 0.98 9 12 3.4e-05 0.0025 18.6 2.0 1 23 596 619 596 619 0.95 10 12 0.092 6.7 7.8 0.1 1 23 627 650 627 650 0.94 11 12 0.0035 0.26 12.3 1.5 1 23 656 680 656 680 0.96 12 12 0.00061 0.045 14.7 3.0 1 21 686 706 686 707 0.95
Sequence Information
- Coding Sequence
- ATGGAGCCCAACATGTCATTCTTCAGTCTACCATTCGTTGATTCAGAGACATCGGATTTAGTGTTTCATAGGAAAGTGCCGGAATGCGATTATGACTTTCAAAACGAACTCCCTTCGCAAAGTGCTCTTTTGGCTGCGGACGATGTACTTGCGCAATTTTTATCTTCTGATGGTCCTTTAGAAGAACCTGATTTAAATGGGCCTACAACCTTACACTGTGAAATATGTCAGAAGAGATTtgataatgcaaaaaagtattatGGACATTTAAGAGTACATTCCAAGGATAATCTATGGATTTGTGaaaagtgTCCAAATCAGAAATTTGCCACAAAACAGCATCTTATGAAGCACAGTCTGACGCATAAACCTCTGGCACGTGTCTGGAAGTGCCCTCAGTGTTCCATGTCCTTTGAAGCTCTCTGGCGCTTACAACAACATCTGTTTGCTAAACATTTAGACTACAGacCTCACAAATGTGACGAGTGTGAGAAATCATTCCAGAAGCCCTCCGATTTAAAGAAACATAAAGATTTACACAATGATGTTAAACCACACGCCTGTCTGTGTTGTGATAagaaatttaatcataaatcgaATTTAAATCGACACATGTTACTGCACAGTAAGGACAAACCCTTCAGTTGTTCAGGTTGTCACAATAGGTTCACGCAGGTAGCCTCGTTAAAGCGTCATCAAAAAAACTGCGCCTACTACAGTAACGAAAATgttaacaatgaaaatataaggAAGAACTATTGCCGAATATGTGGAGcgacatttcaatataaaaatgctttacTGGATCATTGTGTGAGACAACACACGAATCCAAGGCAAGACACAGATACCGATGTCAAAACGAGCCAAGTGAATATAGATACGAATAGAACAGAAGACAACATTGTCGACGATATATTATCAGCTGAGGATGACTACATGACGATGAGTCAACAGGAAGTACACAATTATAACAACCATCAAAGCCTATCCGACGTAAACACATACGACAATCTGAtgcaaattgaattttttaaagaaatgaatCAATTGCACATATTGGACGATGAACTCCTGTACAACGATCTAGATTTTGACAGTTTTCATAACAGTCACACGTTCAATGTTAACGACATAGATTATGTTAACGATAAAAACGGTGAGATATTATTCGATTTCACCGATGGGGGCAAAAGTGTGGATCAAGATATAATGAACGCGCTGTACCACGTCAAGGCTGAACATTTACCTGATGAACTCCTGAACGTGAACGACGTGAACACAAAAACGACTGAGGTTAATCAAAATCCAGCAGTCGCTGTCGATGAATGCGCAACTATATTCGAAAGTGACGTGGATTTAGAAGCGAGTACTAATTTAGCTGCGAATTTGAATCAATTGATCGGTGAAAATAGTGTACAGTATATATCGACCGAAGACGacgatatgtttataattagtttaaatagtGAAATTGATGCAGTACAGTTAACTGACATGTTGAACATAGGTATTGATGTTGTTAATACGAAGAGTGAGGGGAACGCTGAGACTGAAACGGAAGCGCCCGGTGCTGATGTAACCTATGATAACGCACATcccataattattaaaattgaagaaaCTAACCAGTTGAAGAATGAAATGAGTGAGAAGGGAAATAGTAGAGCGAAACCGAAGACAAAGAAGCAGGTTATTTACGTTTGCTCGACGTGCGATAAGATATTCAAAAAGAAAGATAACTACAAATCTCATATAGCGACGCACGAGGCGGGGCTGCGGCGCCACGCGTGCGCGCAGTGCGGCGCGCGGTTCAGCTACCGCTCGACGCTCAACAAGCACCGGCGCCGCGCGCACGAGCCGCGCCCGCGCGCCGCGCACGCGTGCGGCCGCTGCGCGCGGGCCTTCGCCGCCGCCTGGATGCTCAAAAACCACATCGAACGCGATCACGAACGTCTGACCCCGTACGCGTGCGACGCGGAAGGCTGCGACAGGAAATTCTACAAGAAATGTGACCTGGTCGTCCATAAAAGATACCACACGGGCGAGCGACCGTTCTCGTGTCAGAAGTGCAAACAGGCTTTTCCGCACGTCTCACATCTCAAGCGACACGAACGTTATGTCGACTGCAAGCAAAGGACTCGAAGACAAGAGCCGtag
- Protein Sequence
- MEPNMSFFSLPFVDSETSDLVFHRKVPECDYDFQNELPSQSALLAADDVLAQFLSSDGPLEEPDLNGPTTLHCEICQKRFDNAKKYYGHLRVHSKDNLWICEKCPNQKFATKQHLMKHSLTHKPLARVWKCPQCSMSFEALWRLQQHLFAKHLDYRPHKCDECEKSFQKPSDLKKHKDLHNDVKPHACLCCDKKFNHKSNLNRHMLLHSKDKPFSCSGCHNRFTQVASLKRHQKNCAYYSNENVNNENIRKNYCRICGATFQYKNALLDHCVRQHTNPRQDTDTDVKTSQVNIDTNRTEDNIVDDILSAEDDYMTMSQQEVHNYNNHQSLSDVNTYDNLMQIEFFKEMNQLHILDDELLYNDLDFDSFHNSHTFNVNDIDYVNDKNGEILFDFTDGGKSVDQDIMNALYHVKAEHLPDELLNVNDVNTKTTEVNQNPAVAVDECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEDDDMFIISLNSEIDAVQLTDMLNIGIDVVNTKSEGNAETETEAPGADVTYDNAHPIIIKIEETNQLKNEMSEKGNSRAKPKTKKQVIYVCSTCDKIFKKKDNYKSHIATHEAGLRRHACAQCGARFSYRSTLNKHRRRAHEPRPRAAHACGRCARAFAAAWMLKNHIERDHERLTPYACDAEGCDRKFYKKCDLVVHKRYHTGERPFSCQKCKQAFPHVSHLKRHERYVDCKQRTRRQEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985416;
- 90% Identity
- iTF_01506616; iTF_01507484;
- 80% Identity
- -