Basic Information

Gene Symbol
ZNF711
Assembly
GCA_905220565.1
Location
HG992229.1:9881304-9887815[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.002 0.22 12.8 1.8 2 23 72 93 71 93 0.96
2 12 0.13 14 7.1 0.4 3 23 101 122 99 122 0.92
3 12 0.29 31 6.0 0.1 2 23 130 152 129 152 0.88
4 12 0.0001 0.011 17.0 3.3 1 23 158 180 158 180 0.95
5 12 0.00013 0.014 16.6 6.9 1 23 186 208 186 208 0.94
6 12 0.00093 0.099 13.9 1.1 1 21 214 234 214 235 0.96
7 12 0.061 6.5 8.2 1.0 3 19 257 273 256 278 0.92
8 12 1.8e-05 0.0019 19.3 3.8 1 23 578 600 578 600 0.98
9 12 2e-05 0.0021 19.2 0.5 1 23 607 630 607 630 0.91
10 12 0.0094 1 10.7 0.2 1 23 638 661 638 661 0.95
11 12 0.0095 1 10.7 3.2 1 23 667 691 667 691 0.97
12 12 0.0001 0.011 16.9 1.2 1 21 697 717 697 718 0.95

Sequence Information

Coding Sequence
ATGGAGACCACCATGTCATTTTTCAGTCTACCATTTGTGGATTCTGAGACAACAGATTTAGTATTTCATAAAAAAGTTCCAGAATGCGATTATGACTTTCAAAATGAGCTTCCTTCGCAAAGTGCTCTGTTGGCTGCGGACGATGTTCTTGCACAATTTTTATCATCTGATGGCCCTCTTGAAGAGCCTGATTTGAATGGCCCTACGACTTTGCATTGTGAGATTTGTCAAAAGAGATTTGATAATGCAAAAAAGTATTATGGTCATTTGCGAGTACATTCCAAGGATAATTTGTGGATTTGTGACAGATGCCCAAATCAGAAGTTCGCTACGAAACAAGCTCTCATGAAGCACAGTTTAACACATAAGCCTCTAGCTCGTGTTTGGAAGTGCCCTCAGTGTTCTATGGCTTTTGAGGCTCTCTGGCGTTTACAACAACATCTGTTTGCTAAACATTTAGACTACAGACCTCACAAATGCGACCAATGTGAGAAATCATTCCAAAAGCCGTCAGACTTAAAGAAACACAAAGATTTACACAGTGATGTCAAGCGTCATGCCTGCCCATGTTGTGATAAGAAATTCAACCATAAATCCAATTTAAACAGACACATGTTGCTTCACACTAAAGACAAACCTTTTAGTTGTTCAGGGTGCCATGGGAGGTTTACACAGATAGCATCATTAAAACGACATCAAAAAAATTGTGTACTCTTTAACATTGCAAGTGTTAGTAACGTTAATCAAGACAAAACCAGGAAGAATTATTGTAGAATATGTGGTGCTACTTTTCAATACAAAAGTGCATTGTTGGAACATTGTGTGAGACAACACACTAATCCAAGTAATGATGTCCATAAAGATGATAAAACATGCCAAATGAACATTGATACATGTAGAACGGAGGACAATATTGTTGATGATATTCTATCGGCTGAAGACGATTACATGAGAATGTCATCCCAGCAAGAGGTTGAAGTCCTGCATAATTACAATAATCAACAAAACCTCCCAGATGTCAACACTTACGATAACCTCATGCAGATCGAATTCCTCAAGGAAATGAATCAGTTACACATATTGGATGACGAATTTTTATACAATGATTTAGACTTTGATAGTTTTCATAATAATCACACCTTAAATCCGAATGATATAGATTATGAAAATGACAAAAATGGTGAAATATTATTCGACTTTGCGGATGGAGGTAGAAGCGTAGATCAGGATTTAATGAATGCATTGTGTCATGTTAAAGCCGAACATCTACCAGATGACCTCTTAAATGTGGAAGATATCAGCACCAAACCAACTGAAACTATTCATCCTCCAGTTTCTGTTAATGAATGTGCAACTATATTTGAAAGTGATGTTGATTTGGAAGCCAGCACTAATTTAGCTGCAAACCTTAACCAGTTGATCGGTGAAAATAGTGTACAGTATATATCAACGGAAGATGATGATATGTTTATTATTAGTTTAAATAGTGAAATAGACGCTGAGCAGTTGACTGATATGTTAAATATAGGAATGGGAGTTGTTAACGACAAGGACGAGGAAACAGCTCAAACAGAAAAAACCGTGTCTGATAATGAATTTCAGACACAAGCTGAAAGTAACAATTCTAAACCAATAAAAATTAAAATCGAGGAACAATCTATGGAGCTAAGTGAATCTAAAGTTAATGACAAAGAAAACAGAGCGAAAACAAAGGGCAAGAAGCAAGTGCTCTACATTTGTTCGACGTGTCATAAAATATTTAAAAAGAAAGATAACTACAAATCACATATAGCGACACATTCGGCGGCGCTACGGAGACACGTGTGCGGCGTGTGCGGAGAACGTTTCAGCTACCGCTCCACGCTCAACAAGCACCGCGCGGCGGCGCACGAGCCGCGCGTCCGCCCCGCGCACGCCTGCTCGCAGTGCGCGCGCACCTTCGCCGCCGCCTGGATGCTGAAGAACCACATCGAGAGAGACCACGAACATTTAACTCCCTACGTGTGTGATGCGAAAGACTGCAGTAGAAAGTTCTACAAGAAATGTGATCTCGTCGTCCATAAAAGATATCACACGGGCGAGCGTCCATTTGTCTGCGAGATTTGCAAGCAGGCTTTTCCTCATATCTCACATCTCAAGAGACACGAGCGTTTTGTAGATTGCACGCATAGGTCTCGAAAAAATGTAGCGTGA
Protein Sequence
METTMSFFSLPFVDSETTDLVFHKKVPECDYDFQNELPSQSALLAADDVLAQFLSSDGPLEEPDLNGPTTLHCEICQKRFDNAKKYYGHLRVHSKDNLWICDRCPNQKFATKQALMKHSLTHKPLARVWKCPQCSMAFEALWRLQQHLFAKHLDYRPHKCDQCEKSFQKPSDLKKHKDLHSDVKRHACPCCDKKFNHKSNLNRHMLLHTKDKPFSCSGCHGRFTQIASLKRHQKNCVLFNIASVSNVNQDKTRKNYCRICGATFQYKSALLEHCVRQHTNPSNDVHKDDKTCQMNIDTCRTEDNIVDDILSAEDDYMRMSSQQEVEVLHNYNNQQNLPDVNTYDNLMQIEFLKEMNQLHILDDEFLYNDLDFDSFHNNHTLNPNDIDYENDKNGEILFDFADGGRSVDQDLMNALCHVKAEHLPDDLLNVEDISTKPTETIHPPVSVNECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEDDDMFIISLNSEIDAEQLTDMLNIGMGVVNDKDEETAQTEKTVSDNEFQTQAESNNSKPIKIKIEEQSMELSESKVNDKENRAKTKGKKQVLYICSTCHKIFKKKDNYKSHIATHSAALRRHVCGVCGERFSYRSTLNKHRAAAHEPRVRPAHACSQCARTFAAAWMLKNHIERDHEHLTPYVCDAKDCSRKFYKKCDLVVHKRYHTGERPFVCEICKQAFPHISHLKRHERFVDCTHRSRKNVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2