Vtam008048.2
Basic Information
- Insect
- Vanessa tameamea
- Gene Symbol
- kn
- Assembly
- GCA_037043105.1
- Location
- CM073286.1:9185043-9196769[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-54 2.7e-50 171.7 0.0 11 143 122 244 113 254 0.91
Sequence Information
- Coding Sequence
- ATGCCGAAGAACGCAAGTGGCGCCACCTGCATCAGTCGCGTCGTCCCGCTCTTGAGGCGAGGGCGTGTCCCTAGGGCACCTCCCACAGTCCGCGGGGACGGACGGGGGCACCGCGATGCCCGAGCACTCGGCGGCGCGCTCCCGCGACGCTTGCGTCCGCTCGTCGAGATTCGGTCGGACGAGTTGAACGCGGCGGCGGGCGGGTACACCGGCTCGCCGTGGCCGCCGCTCGAGCTCGACCCCGTGGGATGGGGCCGCAAGCTGTACCCGTCTGGAGCGCCGAGATCATCAGGTGGTCTGATGTTTGGCCTTCACCACCAGGAGGCGGCGGGGGTTCACGCTCAGCCGCGAGGACCCGTCACGTCTCTGAAAGAAGAGCCTCTCACACGAGCTTGGATGACTCCCACTTCTTTAGTTGACAATACCAACAGCGTGGGCGTAGGGCGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATCTGCGCAAGAGCAACTTCTTCCACTTTGTCGTAGCACTCTACGATCGCGCCGGTCAGCCGGTAGAAATAGAAAGGACCGCGTTCATAGGCTTCATTGAGAAAGATCAGGAAGCTGAAGGTCAAAAAACAAACAATGGTATTCAATATCGACTACAATTGCTTTATGCAAACGGTATACGGCAAGAACAGGACATCTTCGTTCGATTAATAGACTCTGTTACGAAACAgTTACCTCAAAATGAGGGTCGCGCACGTGGCGAGCACGCGGCCACGTGGCTGATTGTCATCGCCGGCGCCCGATTAGACCTCATCCACACGCCTACCCGCCTCCGGTCAGCGGAATTATATATCTGGTAG
- Protein Sequence
- MPKNASGATCISRVVPLLRRGRVPRAPPTVRGDGRGHRDARALGGALPRRLRPLVEIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQLPQNEGRARGEHAATWLIVIAGARLDLIHTPTRLRSAELYIW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01080518;
- 90% Identity
- iTF_01079682; iTF_01506954; iTF_01078862; iTF_01080518; iTF_00896561; iTF_00796312;
- 80% Identity
- -