Vcar014212.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- kn
- Assembly
- GCA_905220365.1
- Location
- LR999927.1:5814954-5825661[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-54 1.1e-49 169.8 0.0 11 135 122 236 113 243 0.93
Sequence Information
- Coding Sequence
- ATGCTGAAACACGTAAGTGGCGCCACCTGCATCAGTCGCGTCGTCCCGCTCTTGAGGCGAGGGCGTGTCCCTAGGGCACCTCCCACAGTCCGCGGGGACGGACGGGGGCACCGCGATGCCCGAGCACTCGGCGGCGCGCTCCCGCGACGCTTGCGTCCGTTCGTCGAGATTCGGTCGGACGAGTTAAACGCGGCGGCGGGCGGGTACACCGGCTCGCCGTGGCCGCCGCTCGAGCTCGACCCCGTGGGATGGGGCCGCAAGCTGTACCCGTCTGGAGCGCCGAGATCATCAGGTGGTCTGATGTTTGGCCTTCACCACCAGGAGACGGCGGGTGTTCACGCCCAGCCACGAGGACCCGTCACATCCCTGAAAGAAGAGCCTCTCACACGAGCTTGGATGACTCCAACTTCTTTAGTTGACAATACCAACAGTGTGGGCGTAGGGCGTGCCCACTTCGAGAAGCAGCCGCCCAGCAATCTGCGCAAGAGCAACTTCTTCCACTTTGTCGTAGCACTGTACGACCGGGCCGGCCAACCGGTCGAAATAGAAAGGACAGCGTTCATAGGCTTCATTGAAAAAGATCAAGAAGCTGAAGGTCAAAAAACAAACAATGGTATTCAATATCGACTACAATTGCTATATGCAAACGGTATACGGCAAGAACAGGATATCTTCGTTCGATTAATCGACTCTGTTACGAAACAGAATGAGGGTCGCGCACGTGGCGGGCACGCGGACACGTGGCTGATTGTCATCGCCGGCGCCCGATTAGACCTCATCCGCACGCCTACCCGCCTCCGGTCAGCGGAATTATAG
- Protein Sequence
- MLKHVSGATCISRVVPLLRRGRVPRAPPTVRGDGRGHRDARALGGALPRRLRPFVEIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQETAGVHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQNEGRARGGHADTWLIVIAGARLDLIRTPTRLRSAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01080518;
- 90% Identity
- iTF_01507853;
- 80% Identity
- -