Vtam018693.1
Basic Information
- Insect
- Vanessa tameamea
- Gene Symbol
- arid5b
- Assembly
- GCA_037043105.1
- Location
- CM073304.1:5596617-5606523[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-09 1.4e-05 25.9 0.1 3 89 232 304 230 304 0.85
Sequence Information
- Coding Sequence
- ATGCTTCGAGTGATTTATGAGAAGAagGACGAAGTTCTTGCCATCAACGACAAGGTCGTGCTCCGTGCCGAGGACTTGCTCAGTTGGGTATGCAACGGGGCCGAATGGAGATGGGGGCTCCGAGCGGTCTGGAGAGGCGCCTGCGCCCCCCCTAGCGCTCCTTGCGTCACGTCACCGCTACATCACACGAAGCTCGACTTCAGTGACGTAGAGAAAGAAAAGTGCTCTATAACAGTAGAAGTAGAAGATCCAGGTGTCGTCGTGTTCTCGTACCCTCGCTACTGCCGCTACCGCGCACTGCTCGCCCGCCTCGATGGTATCCAGGCGGACTGGCTTCGGGACTCGCTGGTGGCTGCCCTCGGCGGTTACGCCGCTCCCACCAAGAATACTAGAATATTGTATTGCAAGGATACTTTCGAATACCCTGAACTCGAAGGCCACGAGTTCGTCTGTAATCACCTCGCGCCGAAACTGAAGGGCAGGccgcgcgggcggcggcggcgcgcggcgcggtcACGCGACCGGTCGCCCGACAGGTCGCCCGACCGGTCGCCCGACTCGCGCTCCAGTGATAGTGACAGGAATACGCCCGACACGAGAACGCCAAGAAGACTATCACTCCGCAACGGAGCGGAGAAGCAGAGCGAGGAGGAAGAGGAGGTCGAGAGGAAACCAGAAGAGATAGCCAAAGACGAAGCTTTCCTGCAACAGCTCAGGGAGTTTCTCAAAAGTCAAAACGATTCGCTTAAGATATCGCACTCGTTGAAAAACGTGTCGCTGCGCGGCGTGTACCTGTGGGTGTCGCGGCGCGGCGGGCTGTCCGCGTGCCGCGCGGCGCTGTGGCGGCGCCGCTTCGggccgcgcgccgccgccctGCGCGCGCTCTACCAGCGGTATCTCCTCCAGTACGAACATTACCAAAGATGGAACGGCCTGATGCACCCCAAGCCCAACGGGAAGGTCGACGAACCGAATACCATAGACACGATAGACGTCACGGACTCGCCGATCCGCGACGTCGACGTGAAAAAGGACCTCCCCGAGAAGAGGCTCCGGACCCCCTCCCCTAAGAAACTCAAACCGGAGAAATTAGTTTTGGACAACGAAACGGGCGAGCTGACGAAGGAGGAGATGAACATAACCTCGAAACCCGCCGAGGAGTTGAACAGGGAGTTCCTGGACTCGCTCCCTAACCCGAAAGAGGAGGAGAAGGGGAAGATCTTCGTGAAACCGGTCGAGAAGCTGATAGAGCCGAGCCTGAAGATGTTGCAAGACACGGCCCCGTCTGATCCGACGAAGCCGACGGCGATGGACTCCAGCAAGCTGACGGACGTCGGGAGCAAGCCAGGCGACGGGTCCGTGTTCTTGAACGAATTAGCACAAAAACTGAACTTAGgtAACACGGACACGAGGTTCCTGCACCAGCTGTCGCAGACTCCCCCCACCGACAGCCTCTCGAGCCTCTCGACCCTCGGCGACAAATACACGAACGGACACACCAACCTCGCCAGTAACCCCGACATGCAGCGCTCCCGCCCCGCGGGCCGCAGCTCCCTGCGCGCCGTGCGAGTCAAGCCCGCGCGACCCCCCGCCGCCACGCCCCCGATACCTCCTCTCCGCGCGGACTCCGCGTCGTCCTCTCCCCCACTGGGCATCGTGCCCCCCACAGTCACGACCACCGCTACCACCACCATCAACAACTTCGGCATTCACCACCCCCCGCCGCCCGCCAGTCACAGCGATGATGAAATTGTGGAGGTGCCCTACAAGCCGAAAAGTCCTGAAATTATTGACTTAGACGAGTACCCAGAGAGCCCTCAAGGTATTAAGAAGAAAAAACTAGAAATCTTAAAAGAGAGGGGGCTAGAAGTTACCGCAGTTCCGCCGGGGCCCGTCTGGGCGGCTCCCATTCCCAACCCCATCACTCCCCTAATTAACCCCAGTCCTATAATCCTCAACCCGGCGGTTCAGCACCAGATTATGACTCAAGCTCAAATATTCCAAATGTACAATATTATCCCACCGACTTATCCGAATGGTATTCAGGTGCCCAAAGTCATCCAAGCGTCCAGTGCCTTCGGGACGGCTGGACCAGAAAAAACGGTGTACGGCAACCCTAAAGACCCATTCATGCCCCCGCCACACGTGCTGCAGGGCACCCCTATCAAACCACAACGAAGTATCCAAACCCCGACAGCAACCCCCCAGGACATCTTAGACTTAACTTGCAAAACTCAAACGAGTCCATCTCAGAAACCTGCCGTGGAAATAGTCAGGATACCCTCGGCCCCGTCCCCTTCGAAAACCCCCAACGCCCCCCAAAATTTGAGCAAAAACTACACCCTCCTGGACGGGAAAGCAGTCGTCGGCTCGAATTTAGAAATAACGCTAGTTAATTCGAAATCCCAAACTCCACCGAAGCGACCGCCGCAAAAGCGCTCCTCGAATGGGAAATTCGTGTCCGCAAAAACCCCCACTCCTCCCAAAGACTACCCAAAGCCTTACCCGTCCCCGTCCCCTAAGAAGCCCCCAATAGTGGTCCCCAATTACCAAATACCGAGCAGAGAAGACATATCCCCGACAAGTTCGACCACGGCGAAGGAAACGCAGAACAACATGCTCCAGAACGCTTTCAAGGGTCAAAACTTGGCGCAGATCATGGAAATGCAGAAAACTGTGCCCAACCTCAACCCGTTCATGGACCCGATGTACATGAACGCGTTCTACAACAGCCTGGGGCCGATGGACCAGCGCCAGCTGGCCATGTACCGGGACCTGATGACCAGTCAGTTCCGAGGGTACAGCGGCCTGCTGAACATCGGCACGCCGACAACgaagaattaa
- Protein Sequence
- MLRVIYEKKDEVLAINDKVVLRAEDLLSWVCNGAEWRWGLRAVWRGACAPPSAPCVTSPLHHTKLDFSDVEKEKCSITVEVEDPGVVVFSYPRYCRYRALLARLDGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAARSRDRSPDRSPDRSPDSRSSDSDRNTPDTRTPRRLSLRNGAEKQSEEEEEVERKPEEIAKDEAFLQQLREFLKSQNDSLKISHSLKNVSLRGVYLWVSRRGGLSACRAALWRRRFGPRAAALRALYQRYLLQYEHYQRWNGLMHPKPNGKVDEPNTIDTIDVTDSPIRDVDVKKDLPEKRLRTPSPKKLKPEKLVLDNETGELTKEEMNITSKPAEELNREFLDSLPNPKEEEKGKIFVKPVEKLIEPSLKMLQDTAPSDPTKPTAMDSSKLTDVGSKPGDGSVFLNELAQKLNLGNTDTRFLHQLSQTPPTDSLSSLSTLGDKYTNGHTNLASNPDMQRSRPAGRSSLRAVRVKPARPPAATPPIPPLRADSASSSPPLGIVPPTVTTTATTTINNFGIHHPPPPASHSDDEIVEVPYKPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPGPVWAAPIPNPITPLINPSPIILNPAVQHQIMTQAQIFQMYNIIPPTYPNGIQVPKVIQASSAFGTAGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSIQTPTATPQDILDLTCKTQTSPSQKPAVEIVRIPSAPSPSKTPNAPQNLSKNYTLLDGKAVVGSNLEITLVNSKSQTPPKRPPQKRSSNGKFVSAKTPTPPKDYPKPYPSPSPKKPPIVVPNYQIPSREDISPTSSTTAKETQNNMLQNAFKGQNLAQIMEMQKTVPNLNPFMDPMYMNAFYNSLGPMDQRQLAMYRDLMTSQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01506127; iTF_01506952; iTF_00843289; iTF_00824493; iTF_00985784;
- 90% Identity
- iTF_01506127; iTF_01506952; iTF_00843289;
- 80% Identity
- -