Hmis001936.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- arid5b
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000002.1:5757368-5769633[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-10 1.5e-06 29.2 0.2 3 89 235 307 233 307 0.86
Sequence Information
- Coding Sequence
- ATGGCGAACTGGCTGTTTGAAATGCACTTCCATGAtGATGAAGTTCTGGCCATCAACGATAAGGTTGTACTTCGAGCTGAGGACCTGCTGAGCTGGGTCTGCAACGGTGCTGGGTGGAGGTGGGGCCTGCGAGCCGTCTGGAGGGGAGCCTGCGCCCCTCCCAGCGCGCCCTGCCTCACCTCGCCCCTCCACCACACGAAGCTAGACTTCAGCGATGTCGATAAAGAAAAAAGCTCTATAACGGTCGAGGTAGAAGATCCAGGTGTGGTTGTATTCTCCTACCCTCGTTACTGCCGATACCGGGCGTTGCTGGCTCGCCTCGATGGCATCCAGGCTGACTGGCTGAGGGACTCCCTCGTGGCCGCCCTGGGGGGCTACGCTGCTCCCACCAAGAACACTAGGATATTGTATTGCAAGGAAACCTTCGAGTACCCTGAACTGGAAGGGCACGAGTTCGTCTGCAACCACCTAGCTCCGAAACTGAAGGGCAGGccgcgcgggcggcggcgaaGGGCGGCGCGGTCCCGGGATAGATCCCCGGATAGATCGCCGGATAGATCCGGTGACTCCCGGTCCAGTGACAGCGACAGACATACACCGGATACCAGGGCTCCAAGAAGACTTTCCCTCCGAAACGGAGCGGAGAAGCAGAGCGAGGAAGAAGAGGAAGTCCAGAAGAAGCCGGAAGAGATAGCCAAAGACGAAGCTTTCCTGCAACAGCTGCGGGAGTTCCTCAAGAGTCAGAACGATTCGTTGAAAATATCGCACACGGTTAAAAACGTGTCGCTGCGCGCGCTGTACGCGTGGGTGGTGGCGCGCGGCGGGCTGGGCGCGTGCCGCGACGCGCTCTGGCGGCGGCGCTACGGGCACCGCGCCGCGCGCCTGCGCCGGCTCTACCAGCGATATCTTCTCCAATACGAACATTACCAAAGATGGAACGGACTCATACCGAAACTAAACGGAAAGATAGAAGAACCGAACACCATAGACACGATAGACGTGACAGACTCCCCCATACGCGAAATAGACACCAAGCACGACCTCCCCGAGAAGAGGCTAAGGACTCCCTCCCCGAAAAAACTTAAACCAGAAAAACTGATCCTCGACAACGAAACGGGGGAGCTGTTGAAGGAAGACATGAACATAACGTCGAAACCCGCTGAGGAGTTGAACAGGGAGTTCCTAGACTCCCTCCCCAAGGAGGAGGAGAAGGGGAAGATCTTCGTGAAACCCGTGGAGAAGCTGATCGAGCCGAGTCTGAAGATTCACCAAGATTCTAGCGCGTCTGAGCCGTCGAAGGGTGGTGATTGTGGCAAAGTCGATCCGGGAAAGGGCGATGGGAACGTGTATATGAACGAATTAACGCAGAAAATGAATTTAGGTACCACGGACCCAAGATTTCTCCATCTCCCTCAAACTCCCACAGACAGCCTCACGAGTTTATCGTCTTTGGGTGATAAGTACACAAACGGACATACAGCCCTGACTACCGCGGATACGCGGTCGCGCCCGGCGGGTCGCAGCTCGCTGCGCGCCGTGCGCGTCAAGCCCACGCGCCCGCCCGCCGCCACGCGTGAGTGTCACGACACGACACACGACACGCGACTCACGACACAACACACGGACGTACGATACACGACACGGTTACACGACATACGACACACAACACGGACTTCTGATATACGACATACGACTGCGACACCCGACATGCAATCACCACAGCCAAAAATGGATTCGCCGCCACGTAACAATTTCATTCACCAGCCGGCAGCCGCACACAGCGACGACGAAATCGTTGAGGTTCCATACAAACCGAAAAGTCCTGAAATTATCGACTTGGACGAGTATCCAGAGAGTCCGCAAGGTGTCAAGaagaaaaaattagaaattctCAAAGAGAGGGGGCTAGAAGTGACCGCCGTTCCCCCCGGCCCCGTGTGGCCCGCGCCCCCCATCAACCCCCTCCCCCTCGCTCCCCTCAACCCCAACCCCATCATCCTAAACCCAGCGGTTCAGCACCAGATCATGACTCAAGCTCAAATATTCCAAATGTACAATATAATACCACCTAACTACCCCAACGGTATACAAGCTCCCAAAGTTATCCAAGCTTCCAGCGCTTTTGGAACCGCCGGCCCGGAGAAAACGGTCTATGGCAACCCCAAGGACCCCTTCATGCCTCCACCCCATGTCTTGCAGGGAGCCCCCATCAAACCGCAAAGAAGTATTCAAACACCAGCCACAACCCCCCAAGATATCTTAGATTTAACATGCAAAACTCAAACGACGCCGGCTCAGAAACCCGCCGTCGAGATAGTCAGAATACCCTCCGCCCCCTCCCCCTCTAAAACCCCCAACGCCCCCCAGAATTTGAGCAAAAACTACACCCTCCTAGACGGAAAGGCGGTCGTCGGTTCCAATTTGGAAATAACATTAGTGAATACAAAATCCCAGACTCCCCCCAAACGGCCGCCGCAGAAACGCTCCTCGAACGGGAAATTCGTCGCCGCGAAGACCCCTACACCCCCCAAGGACTACCCCAAGCCGTACCCCTCCCCATCCCCCAAGAAACCCCCGATAATCATCCCGAATTACCAAAACCCGACACGGGAGGACCAATCGCCGACGAGTTCGACCAAAGACGCCCAGAATAACTTCCAAACCGCCTTCAAGGGTCAGAATTTGGCGCAAATGATGGAAATGCAGAAAACTGTGCCGACCCTCAACCCCTTTATGGACCCCCTGTACATGAACGCGTTCTACAACAGCTTGGGGTCCATGGATCAGCGCCAGCTAGCAATTTACAGGGACATGATGACCAGCCAGTTCAGAGGGTACAGCGGGCTCTTGAACATCGGCACGCCGACAACGAAAAATTAG
- Protein Sequence
- MANWLFEMHFHDDEVLAINDKVVLRAEDLLSWVCNGAGWRWGLRAVWRGACAPPSAPCLTSPLHHTKLDFSDVDKEKSSITVEVEDPGVVVFSYPRYCRYRALLARLDGIQADWLRDSLVAALGGYAAPTKNTRILYCKETFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAARSRDRSPDRSPDRSGDSRSSDSDRHTPDTRAPRRLSLRNGAEKQSEEEEEVQKKPEEIAKDEAFLQQLREFLKSQNDSLKISHTVKNVSLRALYAWVVARGGLGACRDALWRRRYGHRAARLRRLYQRYLLQYEHYQRWNGLIPKLNGKIEEPNTIDTIDVTDSPIREIDTKHDLPEKRLRTPSPKKLKPEKLILDNETGELLKEDMNITSKPAEELNREFLDSLPKEEEKGKIFVKPVEKLIEPSLKIHQDSSASEPSKGGDCGKVDPGKGDGNVYMNELTQKMNLGTTDPRFLHLPQTPTDSLTSLSSLGDKYTNGHTALTTADTRSRPAGRSSLRAVRVKPTRPPAATRECHDTTHDTRLTTQHTDVRYTTRLHDIRHTTRTSDIRHTTATPDMQSPQPKMDSPPRNNFIHQPAAAHSDDEIVEVPYKPKSPEIIDLDEYPESPQGVKKKKLEILKERGLEVTAVPPGPVWPAPPINPLPLAPLNPNPIILNPAVQHQIMTQAQIFQMYNIIPPNYPNGIQAPKVIQASSAFGTAGPEKTVYGNPKDPFMPPPHVLQGAPIKPQRSIQTPATTPQDILDLTCKTQTTPAQKPAVEIVRIPSAPSPSKTPNAPQNLSKNYTLLDGKAVVGSNLEITLVNTKSQTPPKRPPQKRSSNGKFVAAKTPTPPKDYPKPYPSPSPKKPPIIIPNYQNPTREDQSPTSSTKDAQNNFQTAFKGQNLAQMMEMQKTVPTLNPFMDPLYMNAFYNSLGSMDQRQLAIYRDMMTSQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01507851;
- 90% Identity
- -
- 80% Identity
- -