Basic Information

Insect: Vanessa cardui
Gene Symbol: SMARCC2
Assembly: GCA_905220365.1
Location: LR999946.1:6491663-6509029[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-14 2e-11 44.3 0.1 3 44 595 636 593 638 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-14	2e-11	44.3	0.1	3	44	595	636	593	638	0.95

Sequence Information

Coding Sequence: ATGACAACTCTAGGCCCTAAGAAGGATGGGGGCCCAAATATAGAGTTCTTTCAGTCGGCGGAATCATTGAGTCAATTTGACCAAATTCGTGTGTGGTTACAGAAAAACTGCAAAAAGCATGTCCAAACTGATCCACCAACCAAGGAGGGACTGGCTCAACTTGTCATCCAGCTTATCCAATATCAGGAAAACAAGCTAGGAAAAAATGCAACTGATCCTCCGTTTATGAGACTTCCAATGAAAGTATTCATGGACATGAAACCGGGCGGTTCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAACGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCGTCCCGTAAAGACTTGAACGTGCAAATGATGATGGAAATCGAATCTTCTCTCCTGGGAGCTGAAGTGATACGCTCACCCTGCATCTTCATACGTCCAGAAGTAGACAAAGCAACAGCTAACAAAGTCAAGGATATCATTGTAAATCATCAGGGAGAAATATGTGAGGACGAAGAAGATGCAACGCATATAATTTACCCCGCGGTAGATCCCCTTGAGGAGGAGTACGCTCGACCAGTGTTCAGACGCGGGAACAGCGTTCTCGTACACTGGTACTACTTCCCAGACAGCCACGACACCTGGGCACAGTCTGACCTACCGGTGGAGGTGCCGGAGAGCGCGAGCTGGGAGTGCAGTCGCGCGGAGCCCTGGCGCGTGGCGGCCACGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAAGAGGACTACGAGGTCGACGCCAACGGCAAGAAGAAGGTACACAAGTTGAGGCTGTCCGTTGACGATCTGATTCCCGGATCCGAGCCATCGGGGAAAAGTAAAAAGGGCAAGAGGAAGCGATCTCCCTCGCCGCCGCCACAGAAGCACGGGAAGAGAAAGAGTCGTGTGGCGAAACGCCGCGACAACGACGGCGATGAGGAAGAGGACAACGCGTCCAGAGACAACACTGACGTCGCGCCCACACCGGAGAGCGAGCGCTCAACTGACACGCCGGCGCCGGCCGCGAGCGCGGCGGAGGCGAGCGCGGCGCCCGACGCGCCCGCCACGCCCGCGCCCGCCATGGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAGATGTTGACTAAGGAAGAGTTGGAAGACAACGTGACGGATCAAACTCACCACATCGTAGTGCCGTCGTACTCGGCGTGGTTCGACTACAACTCCATACACACCATCGAGAAGAGAGCGCTGCCTGAGTTCTTCAACAACAAAAACAAATCGAAGACTCCCGAGATATATCTGGCGTATAGGAACTTCATGCTGGACACGTACCGCCTCAACCCGACGGAGTACCTCACGAGCACGGCGTGTCGCCGCAACCTCGCGGGCGACGTGTGCGCCATCATGCGCGTGCACGGCTTCCTCGAGCAGTGGGGGCTCGTCAACTACCAGGTGGAGACGGAGTCTCGCCCGACAGCCATGGGACCGCCGCCCACGTCACACTTCCACGTGTTGTCCGACACACCGTCCGGCTTGCAGCCGTTGCAGGCGAGACCTACTCAACCTAGACCAGCAGAGAACGTAGCGGTACCGAAGGTGGAGGCCGGCCTGCCCAACGGCGCGGACGCGGGCGCGCCCGTCAAGCCCGAGCCCAGCGTTAAGGCGGAGCCCACCATCGAGCTGGGCACCGCGCCCGGGCTCAAGATCGACCAATATCGTGGAGGCGCCCGGGGACGCGAATGGACAGAACAGGAGACCCTCTTACTGCTGGAAGCCCTGGAACTGCACCGAGACGACTGGAACCGCGTGGCGGCGCACGTGGGCTCCAGAACGCATGACGAGTGTATCCTGCATTTCCTGAGACTGCCCATTGAAGACCCATATCTGAATGATACCTCAGCTAGTGGTGTCCTGGGTCCGTTGGCTTACCAGCCCATTCCATTCAGCAAGACCGGCAATCCTGTGATGAGTACGGTCGCGTTCCTGGCTTCCGTAGTCGACCCGCGCATCGCTTCCAAGGCCACTAGAGCTGCTATGGACGAATTTTCTGCTATTAAGGACGAAGTCCCGGCGGCCATGATGGAGGCGCACGTGAAAGCCGCCGGCGCGCACGGGCCCGCCGCCGCGCTCGCCGCCACCGGCATCGCCGGAACCGCGCCCGCCGCGCCCGCGGTAGAGAAGAAAGAAGGCTCAGAGGTAAAACAAGAAGCAATGGAAGTTGATGGGGAGGGCGAAGCGAAGGTGAAAGAGGAACCGGCTGAAGCGCCGCCCGCAGACGAGGCCAAAGAGGCCAAGGATGATGCTACACCGCCCCCAGAAGCGCCAGCTGCGGTAGACTCCAAGGTACAGTCAGCGGCAGCGGCAGCACTCGCCGCTGCCGCCGTGAAGGCGAAACATCTCGCAGGGGTCGAGGAGCGCAAGATAAAGTCCCTCGTGGCTTTACTCGTAGAAACGCAGATGAAGAAGCTGGAAATCAAGCTGAGACACTTTGAAGAGCTCGAGGCAACCATGGAGAGAGAGCGAGAGGGTCTCGAGTATCAACGGCAACAGCTGATACAGGAACGTCAACAGTTCCACCTGGAACAGTTGAAGGCGGCCGAATTCCGGGCGAGAAATCACGCCATTCAAAGGCTGCAGGCGGAGTCGGGGGGCGCGGTGGTGGCGGCGAGCGCGGCGCCCGGCGCGCCCGAGGCTCCGCCCTCAGAGGCGCCGCAGCCCCCGCCCGCGCACCACGCCTGA
Protein Sequence: MTTLGPKKDGGPNIEFFQSAESLSQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQYQENKLGKNATDPPFMRLPMKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPCIFIRPEVDKATANKVKDIIVNHQGEICEDEEDATHIIYPAVDPLEEEYARPVFRRGNSVLVHWYYFPDSHDTWAQSDLPVEVPESASWECSRAEPWRVAATWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIPGSEPSGKSKKGKRKRSPSPPPQKHGKRKSRVAKRRDNDGDEEEDNASRDNTDVAPTPESERSTDTPAPAASAAEASAAPDAPATPAPAMDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMLDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQVETESRPTAMGPPPTSHFHVLSDTPSGLQPLQARPTQPRPAENVAVPKVEAGLPNGADAGAPVKPEPSVKAEPTIELGTAPGLKIDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLNDTSASGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFSAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPAAPAVEKKEGSEVKQEAMEVDGEGEAKVKEEPAEAPPADEAKEAKDDATPPPEAPAAVDSKVQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARNHAIQRLQAESGGAVVAASAAPGAPEAPPSEAPQPPPAHHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01508014;
90% Identity: iTF_00843483;
80% Identity: -