Basic Information

Gene Symbol
SMARCC2
Assembly
None
Location
HiC:7841931-7864911[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-14 1.8e-11 44.3 0.1 3 44 594 635 592 637 0.95

Sequence Information

Coding Sequence
ATGACAACTCTTGGCCCTAAGAAAGACGGGGGCCCGAATATCGAGTTCTTTCAATCGCCGGAATCTTTGGCTCAATTTGACCAAATCCGTGTTTGGTTACAGAAAAATTGCAAAAAGCATGTTCAAACTGATCCACCAACTAAAGAAGGCTTGGCCCAACTTGTCATCCAGCTTATACAATACCAAGAGAATAAGTTGGGGAAAAATGCCACTGATCCTCCGTTTATGAGACTTCCAATGAAAGTATTCATGGACATGAAACCGGGCGGATCCCTGTGTGCGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCGTCTCGTAAAGACCTCAACGTGCAAATGATGATGGAAATCGAGTCTTCTCTCGTGGGGTCTGATGTTATACGTTCTCCGTGCATCTTCATACGACCAGAAGTAGACAAAGGAACAGCCAATAAGGTCAAGGACATCATTGTAAATCATCAGGGCGAGCTTTGTGAAGACGAAGAAGACGCTACACATATTATACATCCAGCGGTGGATCCCCTGGAGGAAGAGTACGCACGGCCAGTATTCAGACGTGGGAACAGCGTCCTCGTACATTGGTACTACTTCCCAGATAGTCACGATACCTGGGCACAAGCTGATCTACCGGTGGATATTCCGGAGAATGTGAGCTGGGACTGCACTCGAGCAGAGCCCTGGCACGTGTCCGCGACGTGGGCGCTCGACCTGCCGCAGTACAATGAATGGATGAACGAAGAGGATTATGAAGTTGATGCCAACGGCAAGAAGAAGGTACACAAGTTGAGACTATCAGTTGACGATCTAATCCCTGGAGCTGAACCTTCAGGGAAAGGTAAAAAAGGAAAGAGGAAGCGATCTCCCTCACCACCGCCACAGAAGCACGGAAAGAGAAAGAGTCGTGGTGCAAAGCGTCGCGATAATGATGGAGATGAAGAAGAGGATAATGCTTCCAGAGACAATACTGATGTAGCGCCTACACCGGAAAGTGAGCGCTCCACTGACACGCCGGCGCCGGTGGCGACGGGCGCGGCGGAGGCGAGCGCGGCGGAGGCGCCGGCCACGCCCGCGCCCGCCATGGACGCGCACGACGACTCGCAGGGCAAGCACTCCGACTCCAACACGCAGGAAATGCTAACTAAAGAAGAGCTGGAAGATAACGTAACGGATCAAACTCATCACATCGTAGTGCCGTCCTACTCGGCGTGGTTCGACTACAACTCCATACACACCATCGAGAAAAGAGCTTTACCCGAATTCTTCAATAATAAGAATAAGTCGAAGACACCCGAGATATATTTAGCATACAGGAACTTCATGCTGGACACGTACCGGCTGAACCCCACGGAGTACCTGACGAGCACGGCGTGTCGCCGGAACCTGGCGGGCGACGTGTGCGCCATCATGCGCGTGCACGGCTTCCTGGAGCAGTGGGGCCTCGTCAACTACCAGGTGGAGACGGAGTCTCGGCCGACGGCGATGGGTCCGCCTCCCACGTCGCACTTCCACGTGCTGTCCGACACTCCGTCCGGCCTGCAGCCGCTGCAGGCGAGGCCCGCGCAGCCGAGACCAGAGAATGTAGCAGTGCCGAAGGTGGAGGCAGGCTTGCCTAACGGCGCGGAAGCGAGTGCACCCGTCAAGCCGGAACCAAACGTTAAGCCCGAGCCGACCATTGAACTTGGTACCGCTCCTGGACTCAAGATGGATCAGTACCGGGGCGGAGCTCGGGGCCGCGAGTGGACGGAACAGGAGACGCTGCTGCTGCTGGAAGCACTGGAGCTGCATCGAGACGACTGGAACCGCGTCGCCGCACACGTGGGCTCACGCACGCACGACGAGTGCATTCTGCACTTCCTGAGGCTGCCCATTGAGGATCCCTACTTAAATGACACTTCGGCTAGCGGTGTCCTAGGTCCATTAGCTTACCAGCCCATTCCATTCAGCAAGACTGGTAATCCCGTTATGAGTACAGTCGCATTCCTGGCCTCTGTAGTGGACCCTCGCATAGCTTCTAAAGCCACTAGGGCCGCCATGGACGAATTTGCTGCTATTAAGGACGAGGTGCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCCGCCGCGCACGGGCCCGCCGCCGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCGCCGCCCGCCGCCGTAGAGAAGAAAGAAGGCGCAGAAGTGAAACAGGAAGCGATGGAAGTAGACGGAGAGGGCGAGGCAAAGGTAAAGGAAGAGCCCGCCGAGGCGCCGTCCGCTGACGAAGCTAAAGAGACCAAGGACGATGCCACTCCTCCACCAGAAGCACCAGCGGCAGTAGATGCTAAGCTGCAATCAGCAGCAGCGGCTGCGCTCGCAGCGGCAGCGGTGAAGGCGAAGCATCTCGCGGGAGTCGAGGAGCGAAAAATCAAGTCCCTCGTCGCGCTACTCGTAGAAACGCAGATGAAGAAGCTAGAGATCAAGCTAAGGCATTTCGAGGAGCTAGAGGCGACCATGGAACGAGAAAGAGAAGGTTTGGAGTATCAACGTCAACAGCTGATACAAGAACGCCAACAATTCCATTTAGAACAGCTGAAAGCAGCCGAATTCCGTGCGAGAAATCAAGCTATTCAAAGACTGCAAGCGGAGTCGGGCGGCGCGGGGGTCGCGGGCGGTGCGGGGGTCGCGGGGAGCGCGGGGCCGGCCGGCGCGGTCGAGCCGCCGCCCGCCGACGCGCCGCAGCCGCCGCCGCACCACGCGTGA
Protein Sequence
MTTLGPKKDGGPNIEFFQSPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQYQENKLGKNATDPPFMRLPMKVFMDMKPGGSLCAVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLVGSDVIRSPCIFIRPEVDKGTANKVKDIIVNHQGELCEDEEDATHIIHPAVDPLEEEYARPVFRRGNSVLVHWYYFPDSHDTWAQADLPVDIPENVSWDCTRAEPWHVSATWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIPGAEPSGKGKKGKRKRSPSPPPQKHGKRKSRGAKRRDNDGDEEEDNASRDNTDVAPTPESERSTDTPAPVATGAAEASAAEAPATPAPAMDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMLDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQVETESRPTAMGPPPTSHFHVLSDTPSGLQPLQARPAQPRPENVAVPKVEAGLPNGAEASAPVKPEPNVKPEPTIELGTAPGLKMDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLNDTSASGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAAAHGPAAALAATGIAGTAPPPAAVEKKEGAEVKQEAMEVDGEGEAKVKEEPAEAPSADEAKETKDDATPPPEAPAAVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARNQAIQRLQAESGGAGVAGGAGVAGSAGPAGAVEPPPADAPQPPPHHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2