Vcar007317.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- bun
- Assembly
- GCA_905220365.1
- Location
- LR999925.1:9382396-9397219[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-32 1.4e-28 99.3 1.0 1 54 51 104 51 107 0.98
Sequence Information
- Coding Sequence
- ATGCAAACCAAACTTATAAGTGCAAGCTACTCGTCAATCATGAACAAACAGGATTTGCTCAGAGAAGTCGTCGTCAAGTACATCGACTATTTCTACCCTGTCGCATCGGGTACAAGCGCCGTGGCCATCGACAACAAGATCGAGCAAGCTATGGATCTGGTTAAGAGCCACTTGATGTTTGCGGTGCGCGAAGAGGTCGAAGTCCTCAAGGAGCGCATCGCCGAACTCATGGAGAGAATTAACCAGCTCGAAGTGGAGAACAGCTACCTGCGCGCGCATGCCAGCCAGGACACGCTAGCGCAGCTACCGGCCGCTGGCACGAAGCCGCCGCCACAGCCGCAGGGCCCGCAGCCCCCGGTCTCGTAG
- Protein Sequence
- MQTKLISASYSSIMNKQDLLREVVVKYIDYFYPVASGTSAVAIDNKIEQAMDLVKSHLMFAVREEVEVLKERIAELMERINQLEVENSYLRAHASQDTLAQLPAAGTKPPPQPQGPQPPVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025733;
- 90% Identity
- iTF_01019982;
- 80% Identity
- iTF_01078837;