Basic Information

Insect: Vanessa atalanta
Gene Symbol: -
Assembly: GCA_905147765.1
Location: LR990551.1:2804501-2812250[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.00098 0.075 13.8 6.3 1 21 192 212 192 214 0.95

2 29 0.002 0.15 12.9 0.8 2 20 242 260 241 262 0.93

3 29 3.6e-05 0.0028 18.3 0.5 3 23 289 310 287 310 0.96

4 29 8.1 6.2e+02 1.5 0.1 2 12 330 340 329 342 0.85

5 29 0.012 0.91 10.4 1.2 1 23 360 382 360 382 0.97

6 29 0.00052 0.04 14.7 0.5 1 23 402 424 402 424 0.96

7 29 0.00015 0.012 16.4 3.1 2 23 464 485 463 485 0.96

8 29 0.00032 0.025 15.3 2.3 2 23 529 551 529 551 0.97

9 29 0.00017 0.013 16.2 0.7 1 23 601 624 601 624 0.97

10 29 0.00032 0.025 15.4 0.2 1 23 680 702 680 702 0.97

11 29 0.0068 0.52 11.2 5.7 2 23 714 735 713 735 0.96

12 29 0.035 2.7 9.0 1.7 2 23 747 768 746 768 0.96

13 29 0.0036 0.28 12.1 1.7 1 23 778 800 778 800 0.98

14 29 0.0051 0.39 11.6 9.8 1 23 829 851 829 851 0.97

15 29 0.00014 0.011 16.5 3.6 1 23 862 884 862 884 0.99

16 29 2e-05 0.0016 19.1 0.4 1 23 892 914 892 914 0.98

17 29 0.0026 0.2 12.5 0.1 2 23 934 956 933 956 0.97

18 29 10 7.7e+02 1.2 0.2 1 10 974 983 974 992 0.93

19 29 0.069 5.3 8.0 3.5 1 23 1003 1025 1003 1025 0.97

20 29 0.017 1.3 9.9 1.5 2 23 1036 1058 1035 1058 0.95

21 29 0.00067 0.052 14.3 0.3 2 23 1081 1102 1080 1102 0.95

22 29 0.002 0.16 12.8 0.2 2 23 1183 1204 1182 1204 0.95

23 29 1.5 1.1e+02 3.8 4.2 5 23 1214 1232 1211 1232 0.94

24 29 0.012 0.93 10.4 0.8 2 23 1243 1265 1242 1265 0.95

25 29 1.1 81 4.3 3.8 2 23 1282 1300 1282 1300 0.89

26 29 0.18 14 6.7 1.2 2 21 1304 1323 1304 1324 0.93

27 29 0.4 31 5.6 0.9 2 23 1373 1394 1372 1394 0.93

28 29 0.0028 0.22 12.4 0.3 2 23 1405 1427 1404 1427 0.96

29 29 4.4 3.4e+02 2.3 1.6 2 19 1465 1482 1464 1482 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.00098	0.075	13.8	6.3	1	21	192	212	192	214	0.95
2	29	0.002	0.15	12.9	0.8	2	20	242	260	241	262	0.93
3	29	3.6e-05	0.0028	18.3	0.5	3	23	289	310	287	310	0.96
4	29	8.1	6.2e+02	1.5	0.1	2	12	330	340	329	342	0.85
5	29	0.012	0.91	10.4	1.2	1	23	360	382	360	382	0.97
6	29	0.00052	0.04	14.7	0.5	1	23	402	424	402	424	0.96
7	29	0.00015	0.012	16.4	3.1	2	23	464	485	463	485	0.96
8	29	0.00032	0.025	15.3	2.3	2	23	529	551	529	551	0.97
9	29	0.00017	0.013	16.2	0.7	1	23	601	624	601	624	0.97
10	29	0.00032	0.025	15.4	0.2	1	23	680	702	680	702	0.97
11	29	0.0068	0.52	11.2	5.7	2	23	714	735	713	735	0.96
12	29	0.035	2.7	9.0	1.7	2	23	747	768	746	768	0.96
13	29	0.0036	0.28	12.1	1.7	1	23	778	800	778	800	0.98
14	29	0.0051	0.39	11.6	9.8	1	23	829	851	829	851	0.97
15	29	0.00014	0.011	16.5	3.6	1	23	862	884	862	884	0.99
16	29	2e-05	0.0016	19.1	0.4	1	23	892	914	892	914	0.98
17	29	0.0026	0.2	12.5	0.1	2	23	934	956	933	956	0.97
18	29	10	7.7e+02	1.2	0.2	1	10	974	983	974	992	0.93
19	29	0.069	5.3	8.0	3.5	1	23	1003	1025	1003	1025	0.97
20	29	0.017	1.3	9.9	1.5	2	23	1036	1058	1035	1058	0.95
21	29	0.00067	0.052	14.3	0.3	2	23	1081	1102	1080	1102	0.95
22	29	0.002	0.16	12.8	0.2	2	23	1183	1204	1182	1204	0.95
23	29	1.5	1.1e+02	3.8	4.2	5	23	1214	1232	1211	1232	0.94
24	29	0.012	0.93	10.4	0.8	2	23	1243	1265	1242	1265	0.95
25	29	1.1	81	4.3	3.8	2	23	1282	1300	1282	1300	0.89
26	29	0.18	14	6.7	1.2	2	21	1304	1323	1304	1324	0.93
27	29	0.4	31	5.6	0.9	2	23	1373	1394	1372	1394	0.93
28	29	0.0028	0.22	12.4	0.3	2	23	1405	1427	1404	1427	0.96
29	29	4.4	3.4e+02	2.3	1.6	2	19	1465	1482	1464	1482	0.85

Sequence Information

Coding Sequence: ATGGCTCTCAAACTTGGAAAATGCAGACTATGTCTCAAGCTCGGCGACTTCTATTCCATCTTTACGATGGACAACAATTTACAACTCGCCGAAATGGTTATGGAATGTGCCCGAGTTAAAATATACGACGGCGATGGGCTTCCAGATAAAATTTGCAGCGAATGTATTCAAAAACTCAGTAGCGCCCATATATTTAAACAACAATGCGAACGATCTGATCAAGAGTTAAGACGCAACTATGTTCCACCGCCAGGGTTCAGTTCACCAACACCACCCAACAGGCAGAGCAGTGATTCAGCGTTTTCATCACAGACTGAAGTTTCTAAGCCATCATCGACGTTCGAAAACAAAGTAACGCCTGTCAGTAGATCTCGTAAGCGAAGCGGTGATAGCATAGACGATGCGTCTATAAGCAGCCGTTCTCACGATTACCGACCGGGAAGTTCGAAACGCGTTGACGAACTACGAATGTCTCAGAAGAAGCCTAGGCTTTCGATGAATTCAGATTCTGATTACGATGACAACAGCGCTTCTTTTTATTCAGCTGAAACTGACTCCGATGAACCTCTACTACACAAATGCAAACAATGCGGTAAAGCATTCCGGACACACATCAGTTTATCGGCTCATATGAAATGTCACAAACGAAAAAATGTATTGAAAAATTTGTCTTTTGAATCCCCGAAAGAAATAAAAGATGCTACAGATGAAGAGGACAAACTATCGTGTGACAAATGCGGAAAGCAATTTAAATTAAAAATAATGTTAAAGCGCCATCACGACATTTGCGGCAAATCTCCTCGAAAAGAGCTAATGGTATCATTGGAGCCAATCGATGCTGTACAACAAGTGGCCAAAATAGATTGCCAAATGTGCACAACAAAGTTCAAGACAATCGAGAACTTGGAGAAGCACATGAGGGTTGTGCACGCAGCTGTTTTGAAGAGAGATAATTCAATGAACAACGAAAATGGTAAAATATGCGTTCCTTGTTTGTATTGTGGCCAGCCTTTCGACGATTATTATATCCACAGCGCTCACTTCAATATGTGTCCTCAGAAGAATAATCTCGCCACTTTCGAATGCCCTGTTTGTACAAAAGTTATTACTAAAAAGGGATGTTATTTCTTGCACATTAAAGCGCATTTTTTTCCATTGTCGTCTAATAAATCATTACAAGAAATAACATCGAAGCAGGAAAACTTTCAATGTCGTATGTGTAACAAGAAATTATCTAGCCAAGATACGTTGATAACTCATCTAGCTGCTCACATGTCCAACATAGATGAAGCGGACGAAGGCGGTGACGAAGAGTCTAGAGCAAGCACAATAGATGATTCAGCGTCAGTACATTCCGAATATAGTTCAAATGTTTCAAGCGGGCCATTAAAATGCAAGACTTGTGATAAATCATTTAAATACAAGAAATCTTTATTGACACACGAAGAAAAACATTCTAATGATGGTAAAATAAAGATAGAACCGCCGGACGGGAACAATTCCACAGACTTGTTAAATGAAACTACTAAATCCATGAACCACTACGAATCAGAATCTAGCCAAGACGAAGGCGAAGAAGATAATACCTGTGATATTTGCGAAAAGCAATTTTCATATAAAAGACTGCTTTTGCAGCATAAACGAACCAAACATCCAATGACTTCAGGGTTTAAACGAGCTAAAATCAATTTAAAAAATTGTTCCGTGCGGTGTTTGATATGCGACATTGAAATGAAAGTAAGTGCGATTAACGAACACAATCAGACTCATATATCTGTCAACATTAAGCCAAGAAATTTATACACATGTATGGAATGCGAAGAGCAATTTAAGAGCTGCAGTGCGTTGGCGAATCACATTAAAATAATACACAGGCTTAAGCAACAGCCGAGTAAAATTAATGCACCGCCAGCCGATTTGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCCCTGGACGAGCTCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGCTAAAAATGGTTCACCCTCTGTCAACATGAGTGGCTTTACTTGTCCGATTTGCAACAAACAACTGCCAACGTTGATATCTCTCAAAAGACACGTGAATTGGCATAATCACGTTGGGAAAAGCATGGAGAAAAAGTTGGAATGCTTCGTTTGTAAGGAGACTTTCCGGTTTCAGTGTCATTATAAAATCCACATGCGCGAACACTATAATGACACTAATCTTGACCCCAAATTGCTAACTTGCTCGATCTGTAATCGCAAGAGCAAACATCTCCGTGCGGCTCAGGCACATATGAACTACCACAAGCAAACACGTTTTCAAAATAAAGATTACGAGTGTTCGATTTGCAAGAGAGTGTTTCAGCATCGCAAGGTTTATCTCTCACACATGGCAATTCATTACAAGCGCGGTGAAAGTGCTAATAATACTATTGTGGGTTACGTGTTACCTAACTCGGTCGATAAAAATAAATTTGATGGCACGCATACATGTCATCACTGTGGTAAAATTTGCGATTCGGAAAACTCGCTTAAACATCATATACGGTGGCATAATTCCAAGACGTCGTTATTTGGTGCTCGATACGAATGTCATATCTGTAATTTGCAGTTCACAAACAAAAGAAGGTTAGAACTTCACACCAGAACACATTACGAAGATGATAACGGACCTTATAAGTGTAATATTTGCGGAAAAGGATACATCGATGAAGATTATTATAAGAGACACGTGAAAGGCCATAACTTTGATCACCAATCGCATAAAAAACGAATAGAAAAACTTAGGAAAAACAAAGTGAAGTGTCCGATATGTGCTCGGTACTATCCGGACTTAGTAAAACTCATTCGCCACTTGCGGCGGACCCATCCTGAGAGTAAAATGATAAAGGAGGATCCGGACGCACCCCCTCCAAACTATTATTCTTGTAAATTGTGTGCTAAAGTTTTCTTAGACGAAAGAAGATTACAGTTTCACGAGGAAGCTCATTTACGGAAGCCAGAATTCTACAAATGTAAATTCTGTGGCAAAAAGACCATATCATTGAAAAATCATAGGATCCATATAAAAGGTCATCTCACTCAAAAATATATCGACAATCCATTGAAATGTCCACATTGCGCCGAAACTTTTATGCGGGGTTACGATTTACATTACCATTTGCGGGACGCCCACGATATTAATGAGACATGGATAGAGGAACGACGAAATCAGACCTTGGACGGTCCTTTAAAAGAGCTACAATGTTCTATATGTTTCAAAGTCTTAGCTAGCAAAGGAAACTTTGAAAGACACATTGATTACCATAATTCTCTTCGGTGTAATTACTGCTTTGATTACTTTAGCTCTTTAAGGTTCCTTGAGGGACATCTTGCATTCAGCTGTGACAAAAAGAAACTTATCGGTGACACTGAAATTTACCCGAAAAAAGTTAAGTGCCATGTTTGTTACAAAGCTTTCCATTTGCAAGTGAAATTAGATTGTCACTTGCGCACTCAACACGAAATCAAAACGTTTAAAAAGGCATGCGAAGGAAAACAAGAAATTGTTTGCGATTATTGCTTTAAAGTTTTTGAAAATGAATATGCTCTCAGCACTCATAAAATCTATCATCGCACAGTTGGCTACTATGGCTGTATATATTGCAATAGGAAGTTTAATACAATGACATTGTATAGGAAACACAAAAATCATCACTTCTCCCAACTAAATGTCGATAACCCAACGAAATGTGAGCACTGTGATGAGACATTTGTTGCTTTTAGAGAAATGATATATCACATGAGAGATGTTCACGGAGACGATAAAGAATGGATTGTCCTACCAAAAGAATCGATAGAAGAAAAATGTGATATTTGTCAGAAAACATTCTTTAATTTACACAGACATTTAGATTACCATGAAGAAAACCGTTGCAAAAAATGTGGCGAGTACTTCTTTTCCCGAGCAGATTATGATAATCATCTTTGTGCTATCGACAGCGACGAGGAAGTCACTGAAACTAATACAAATGGCGTTCGGCCTGTATACGAAGAATGTAGTTTCTGTTTCAAACCTGTAACTCGAAAAAACTCAAAGCGTTTACATGATCAAATCCACAGAGGATCAGGTTCTATTTCGTGTCGTTTCTGCTCACTTAAGTTTAAAACCATGGATGCTTTCAATATTCACGCATTTTCGCATAGAAGTAGAAAGTATAAGAAAAAACCAATAAAATGTCGAAAGTGTGGCGAGCAGTTTGTAAAGTATGGTCCATTCATAAAACATATGAAGATTGTCCATAAGTGTTCTAAGAAGCTTCATTACAGAGCCACAGTGATGCCTGAGAAGTGCATTGTTTGTCATGAAGATTTTCCCAATTTACATAACCACTACCGCGCACATTTGCAAAATCAATGTCAACAATGTTTCAAATATTTTACTTCATCCAAAGTGTTTTCACTCCATGATTGCGATAAAGAAGATTCGGATCCGTCTAAAGTCTTTATATGTGACGCTAACTTACCGGCTCTTATTAATTCCTATGTACCGAAAGATGAAAAAGATGATGAGAAATATTACGGTCACGAAGAGGAAGGAGAAGAAGAAGAAGAAGAGATGGTGAATCAAGAGCAAGAGATAGCAACGCAAGATGAAGACAGTCAAAATTCTATTGACATCGATGAAGGAAATGTACATGATATGGTGCACGCCCCAATAATATCCGACGTCCTGTCGCTTTTTAAGAAAAAAGAAGTTAATAGCAAATGCAATGTTGAAAACGATGGACAGAGTAGTGTTAGTGGTAACATTGTGGTTCTAACTGACGATGATTCTATAGGCTTTGAGGAGAACGTACCTGTTATAACGATAGATGATTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKIYDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSSPTPPNRQSSDSAFSSQTEVSKPSSTFENKVTPVSRSRKRSGDSIDDASISSRSHDYRPGSSKRVDELRMSQKKPRLSMNSDSDYDDNSASFYSAETDSDEPLLHKCKQCGKAFRTHISLSAHMKCHKRKNVLKNLSFESPKEIKDATDEEDKLSCDKCGKQFKLKIMLKRHHDICGKSPRKELMVSLEPIDAVQQVAKIDCQMCTTKFKTIENLEKHMRVVHAAVLKRDNSMNNENGKICVPCLYCGQPFDDYYIHSAHFNMCPQKNNLATFECPVCTKVITKKGCYFLHIKAHFFPLSSNKSLQEITSKQENFQCRMCNKKLSSQDTLITHLAAHMSNIDEADEGGDEESRASTIDDSASVHSEYSSNVSSGPLKCKTCDKSFKYKKSLLTHEEKHSNDGKIKIEPPDGNNSTDLLNETTKSMNHYESESSQDEGEEDNTCDICEKQFSYKRLLLQHKRTKHPMTSGFKRAKINLKNCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCMECEEQFKSCSALANHIKIIHRLKQQPSKINAPPADLADFCEVVVTKAEPLDELQSHNGFGEVSAKNGSPSVNMSGFTCPICNKQLPTLISLKRHVNWHNHVGKSMEKKLECFVCKETFRFQCHYKIHMREHYNDTNLDPKLLTCSICNRKSKHLRAAQAHMNYHKQTRFQNKDYECSICKRVFQHRKVYLSHMAIHYKRGESANNTIVGYVLPNSVDKNKFDGTHTCHHCGKICDSENSLKHHIRWHNSKTSLFGARYECHICNLQFTNKRRLELHTRTHYEDDNGPYKCNICGKGYIDEDYYKRHVKGHNFDHQSHKKRIEKLRKNKVKCPICARYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPNYYSCKLCAKVFLDERRLQFHEEAHLRKPEFYKCKFCGKKTISLKNHRIHIKGHLTQKYIDNPLKCPHCAETFMRGYDLHYHLRDAHDINETWIEERRNQTLDGPLKELQCSICFKVLASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEIYPKKVKCHVCYKAFHLQVKLDCHLRTQHEIKTFKKACEGKQEIVCDYCFKVFENEYALSTHKIYHRTVGYYGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIVLPKESIEEKCDICQKTFFNLHRHLDYHEENRCKKCGEYFFSRADYDNHLCAIDSDEEVTETNTNGVRPVYEECSFCFKPVTRKNSKRLHDQIHRGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYKKKPIKCRKCGEQFVKYGPFIKHMKIVHKCSKKLHYRATVMPEKCIVCHEDFPNLHNHYRAHLQNQCQQCFKYFTSSKVFSLHDCDKEDSDPSKVFICDANLPALINSYVPKDEKDDEKYYGHEEEGEEEEEEMVNQEQEIATQDEDSQNSIDIDEGNVHDMVHAPIISDVLSLFKKKEVNSKCNVENDGQSSVSGNIVVLTDDDSIGFEENVPVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01079240;
90% Identity: iTF_01078410;
80% Identity: -