Ucar023303.2
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- osa
- Assembly
- GCA_960531455.1
- Location
- OY482672.1:121251148-121253523[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3 1.2e+04 -1.9 0.1 16 46 320 354 313 356 0.75 2 2 5.5e-15 2.9e-11 44.9 0.0 2 51 575 624 574 625 0.95
Sequence Information
- Coding Sequence
- ATGAACAAAGTTCTGCCTTGGGAACACTTCGAAAGTTTGTACAAAGAATTAATCGGTCAGAATAGTAACGATAGTTCCAGCGGTGGCGGCCATAGCGGCATGGGTTCGGGTCCGCCGGGCACGCCCAATTCGCAGCAGGTAATGCGTCCAACGCCGTCACCGACAGGCTCAACCGGTTCTCGTTCCATGTCACCTGCAGTGGCGCAAAATCATCCCATCTCGCGACCCTCAAGTAATCAATCGAGCAGTGGTGGCCCACTACAACAGCCTGGCACTTCCGgaccaccaccaccgccaccaCCACACATGCAAACAGCAGGACAGCAAGGTGGCGGCAGCGGCGGTCCACAGCAGCAATCTCAACAGCAATCAGCTATCGGTGGTGGTCCGGGGTCACAGCAACAGGTTGTTGGCTTGCCACCAAGTGGCCCAGGCACGCCAAGCGGTGGTGGtccacaacaacagcagcagcaggtGCCACCGAATCAAGGCTTGGGCAGCATGCAGCAAACGCCACCACCTCAGGGTGCAGGCGCTGGTGGAGCTGGGGGCTATCCCCCGCCACCGCATATGCATGGCGTCTATAAAATGGGTGGTCCGGGACAAGGTCCAGGTGGTCCAGGTCCGCAAAGTTTACCTTCGGGTTATCCGCCGCCGCAGCAGTCGCAGCAATATTCTCAAGGAACTTACCCGCCACGCCCGCAATATGCGCCCAGCGGTTATGCGACCACACCGCCACCGTCAAATCAACCAACTGGTGCGAATAGCATGCCACCAGGTGGTGGTCCACAATATCCCGGACGGCCAATGCCAAATCACACAGGCGCCGGCGGTCCGCATGGACAATATCCGCCCTATCAGAATTGGGTGCCACCATCTCCACAAGGCGGACCAGGTGGTGGTGGCGGGGCACCAGGTGGCGCTGGCGCAGCCGCAATGGGAAATCACATACAAGGCAAAGGTACACCACCACCCGGTGGTCCACCACAACCCCCAGGTGGTGGTGGCTCACCGCGTCCGCTCAACTACTTGAAACAGCATTTACAACATAAAGGTGGCTATGTCGGCGGTCCGCAACCGCAACAGGGCTACGGCAATGGACCCGGTATGCATCCTGGTATGCCAATGGGCCCGCCACATCATATGGGACCGCCGCATGGTCCCACCAGTATGGGGCCGCCAACAAGCACACCACCACAAGCCATGGGCGGTGGTGCGGGAGGGCCAGGCGGGCCCGGTGGCAGTATGGTGGGTGTTGGCAGTGGTGTGATATTAGGCGGCGATGGCGAACACATCTCACAGGATAATGGTATTAGTTCGTCGGGCTCGTCGACAGCATCGGGACCACATCCCGTTACATCGGTGGTGACGACCGGACCGGATGGTACGCCCATGGATGAAGTTAGCCAACAAAGTACACTATCGAATGCATCAGCAGCCTCTGGTGAAGATCCACAATGCACAACACCAAAATCACGTAAAAACGATCCATATAGCCAAAGCCATTTAGCGCCACCGAGCACATCGCCAGGCGGCCATCCGGGGCATCCCGGTGGACCCGGCGAAGAATACGAAATGAATTCACCGCCAAATTGGACGCGCACACCAGCTAGTCCGCAGGTATTCAATAGTCATGTGCCGCCGCCAGAGACATTTCGTACGACATCATCGAAAAAATCCGATAGCCTATGTAAATTGTATGAAATGGATGATAATCCGGAGCGACGCAGTTGGCTGGATAAGCTGCGCGCATTCATGGAGGAGCGTCGTACACCAATCACCGCCTGTCCGACAATATCGAAGCAACCGCTCGATTTGTATAggttatatatttatgtaaaagAACGTGGCGGATTCGTCGAGGTATGCAAGGTGCCGTAG
- Protein Sequence
- MNKVLPWEHFESLYKELIGQNSNDSSSGGGHSGMGSGPPGTPNSQQVMRPTPSPTGSTGSRSMSPAVAQNHPISRPSSNQSSSGGPLQQPGTSGPPPPPPPHMQTAGQQGGGSGGPQQQSQQQSAIGGGPGSQQQVVGLPPSGPGTPSGGGPQQQQQQVPPNQGLGSMQQTPPPQGAGAGGAGGYPPPPHMHGVYKMGGPGQGPGGPGPQSLPSGYPPPQQSQQYSQGTYPPRPQYAPSGYATTPPPSNQPTGANSMPPGGGPQYPGRPMPNHTGAGGPHGQYPPYQNWVPPSPQGGPGGGGGAPGGAGAAAMGNHIQGKGTPPPGGPPQPPGGGGSPRPLNYLKQHLQHKGGYVGGPQPQQGYGNGPGMHPGMPMGPPHHMGPPHGPTSMGPPTSTPPQAMGGGAGGPGGPGGSMVGVGSGVILGGDGEHISQDNGISSSGSSTASGPHPVTSVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPGGHPGHPGGPGEEYEMNSPPNWTRTPASPQVFNSHVPPPETFRTTSSKKSDSLCKLYEMDDNPERRSWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081927; iTF_00081928; iTF_00082715;
- 90% Identity
- -
- 80% Identity
- -