Aobl041443.1
Basic Information
- Insect
- Anastrepha obliqua
- Gene Symbol
- osa
- Assembly
- GCA_027943255.1
- Location
- JAPTHQ010000240.1:1931457-1933874[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 1e+04 -1.7 0.1 16 46 331 364 324 367 0.73 2 2 3.2e-15 3e-11 44.9 0.0 2 51 590 639 589 640 0.95
Sequence Information
- Coding Sequence
- ATGAATAAAATTCTGCCTTGGGAGCATTTCGAAAGTTTGTACAAAgaattgatcggtcaaaatagcaacgatagttcgagtggtggcgcacacagcggcatgggctcgggacctccgggcacgcccaattctcagcaggtaatgcgtcccacaccatcacctacaggctcatctggttcgcgttccatgtcaccggcagtggcacaaaatcatcccatttcacgtccctcaagtaatcagtcgagtagtggtggtcctatgcagcaacctggttcgtctggaccaccaccactgccccatatgcaagcgacgcaaggtggcggcggtccacagcaacagcaactgcagcagcaacaACAAATGCCGACCCAACCGCAATCTCAACAGCAGTCGATCGGTGGTCCGGTTGGTGTGCACAGTTccccagccggtgtaggtggctcgcagcagcaggttggaggtctgccacctggtgggccaggtgtacccaccggcccacaacaacagcagcaacaaccaccgccaccaaatcaaggcttgaacagtatgcaaacacaacctcctcaaggatcgggtggtggcacgggcggctatccacctccgcctcatatgcacggtgtctacaagatgggcgggccgggacaaagtcctggtccaggaccacaaggattgccgaccggctacccgccaccacagcagtcgcagcaatattcccaaggaacctacccgccacgtccgcagtatacgcccagcggttatgcgcccacaccgcctccttcgaatcaaccaacatccgcgaacagtatgccaccgggtggaggtcctcaatatcctgggagaccaatgccaaatcacactggtgctggtggtccacacgcacagtatccaccctatcagaactgggtgccaccatcaccacaaggcgggccgggtggaggtggggcaccagttggtgccggcgcagcgggcatgggcaatcatgtacagggcaaaggtacaccaccaccgggtgggccaccacaaccacccggcggtggctcgccgcgtccactcaactatctgaagcagcatttacaacataaaggcggctatggtagcggtcctgcgccgcaacagggctacggcaatggacctggcatgcatccgggaatgccaatggggccgccacatcacatgggtccaccgcacgggcccaccagcatggggccaccgaccagcacaccgcctcaaacaatgggcggtgttgtgggaccaggtggtgttggccccggcggtagtatggttggggtgagcggcagtgtaggtagcggtgtgatattgtctggcgatggcgaacacatctcacaggacaatggcattagttcgtcgggttcgtcgacagcatcgggaccacatccggtcacttcgttggtgacgaccggaccagatggcacgcccattgacgaagttagccaacaaagtacgctatccaatgcatcagcagcttctggtgaagacccacaatgcacaacaccaaaatcacgtaaaaatgatccatacagccaaagccatttagcgccacccagcacatcgccggtcggtcatcccggacatccgagtggacctggtgaggagtacgaaatgaattcaccaccaaattggacgcgaacaccagctagtccgcaagttttcaatagccatgtgccgccacaagagacttttcgtacatcgtctacgaaaaaatcggatagcctctgtaaactgtacgaaatggatgataatccggaaagacgcagttggctggataagctgcgcgccttcatggaggagcgccgaacaccgataaccgcctgtccaacaatatcgaagcaaccgctcgatttgtataggttatatatttatgtaaaagaacgtggaggattcgtcgaggtatgcaaggtgccgtag
- Protein Sequence
- MNKILPWEHFESLYKELIGQNSNDSSSGGAHSGMGSGPPGTPNSQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPSSNQSSSGGPMQQPGSSGPPPLPHMQATQGGGGPQQQQLQQQQQMPTQPQSQQQSIGGPVGVHSSPAGVGGSQQQVGGLPPGGPGVPTGPQQQQQQPPPPNQGLNSMQTQPPQGSGGGTGGYPPPPHMHGVYKMGGPGQSPGPGPQGLPTGYPPPQQSQQYSQGTYPPRPQYTPSGYAPTPPPSNQPTSANSMPPGGGPQYPGRPMPNHTGAGGPHAQYPPYQNWVPPSPQGGPGGGGAPVGAGAAGMGNHVQGKGTPPPGGPPQPPGGGSPRPLNYLKQHLQHKGGYGSGPAPQQGYGNGPGMHPGMPMGPPHHMGPPHGPTSMGPPTSTPPQTMGGVVGPGGVGPGGSMVGVSGSVGSGVILSGDGEHISQDNGISSSGSSTASGPHPVTSLVTTGPDGTPIDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPVGHPGHPSGPGEEYEMNSPPNWTRTPASPQVFNSHVPPQETFRTSSTKKSDSLCKLYEMDDNPERRSWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01505170;
- 90% Identity
- iTF_00081927;
- 80% Identity
- -