Ucar023240.1
Basic Information
- Insect
- Urophora cardui
- Gene Symbol
- dl
- Assembly
- GCA_960531455.1
- Location
- OY482672.1:119979936-119982353[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-65 3.5e-61 207.4 0.0 1 169 69 242 69 242 0.95 2 2 0.41 3.9e+03 -1.0 4.9 58 127 681 754 664 769 0.71
Sequence Information
- Coding Sequence
- ATGGCCGAGGAGTGCCAAGGAGGAATGCATAGAAAGCCAAATGttccacaacaacaacaacaacaacatcagcgGCAGCGGCAGCCACAGCCACAGCAAACGCAGAGTTCAGCCTTACCGACATCCAACGCAACCGCCATCATACCATCCATAGTTCAACAGTTGACGACGTCCAAATCCAGTAGAAAAGACGCAAATGCGCACGTTCGAATTGTCGAGCAGCCCGCGAGTCGAGCCATCCGATTTCGTTATGAGTGCGAACGACGCTCCGCCGGCTCTATTTTGGGCGTCAACTCAACAGCTGTGCGAAAAACTTATCCCACCATCGAGGTGGTTGGCTACAGCGGACGCGGTGTGGTCGTCGTATCGTGCGTAACCAAAGATCCACCCTACCGACCGCATCCGTACATTTTGACGGGCAAGGAGGGCTGCCGCAAGGGCGTCTGCACGGTGGAGATTGGTGGCGAAGCAATGCGTTATGTATTCAACAATTTGGGCATACAGTGTGTGCGAAAGAAGGATATTGATGAGGCGCTGAGAATGCGCGAAGAGATTCGCGTGGATCCATTCAAAACGGGGTTTGCACATCGATCAAAAATGGCCAATGGCTGCAGCAGCGTTGATTTGAATGCGTTGCGTTTGTGCTTTCAAGTGTTCATCGAGGATGATTATGGACGTTTTACGATACCGCTGCCACCCGTCATCTCCGATCCCATACTCAATAAGAACTCGAACAGCGAATTGACAATCACGGAAATGTGTAGCTCGGGCACTGTCCTCGGTAATACGCAGATTATGTTGCTGTGTGAGAAGGTGTCGAAAGATGATATTTGTGTGCGATTCTATGAGGAGAAGATGGAGGCGACAGCAGCAGGAGATCAGGCAGTGACGGCGGCGGGGGCGGCGGAGGAGACCGAGAGAAATCAGGGTGTTATTGGTGGTGCTAGTTGGGAGGCTTATGGCAATTTTCTACCCTCGGATGTGCACAAACAGACCTCGATACGCTTGAAGACACCACGATATCATAATATTTACATTACGCATGAGGTTAAAGTGTTTGTTCAATTGAAGCGTCCGTCCGATGGTGTGGTAAGTGATCCGTGGCAGTTCACATATAAGCCGCTGGACACGAGTTTGGCGCTCTTGAGGCGTAAGTATTGTAATGCAAGTGGCGGCGATGGAACACAGCAGCGGCAGTTAGATGCGCCAGTGGCAACAACAAACATGGAAAAAACaccaacaaaaacagcaataacagcaacaacaaatgaaTTTAGTATTGCCGACTTAATGGTGTCGGAGATGCAGATGATGCTACGGAATTCGGGCGCCACAATGACGCCTTCGCCACAGCCCTCCTCACCGCCGACGTCATTCAATCCGAGCTGCTACAATACGAACACCATCCAGCTGCAGAACAAACTCAACAGCACCAGCACGCCACCGAAATCGCCGCATGAGGCGGAATTTAGCGAATTCAGCTTGGCTAATGTGAAGCGTGAagaagcaacagcaacagcaacaacaacaacaccgtCAACATATTTAACTGAGCCTGGAAAACCGTGGGATAAACACCATCTCAACGAATATGGTTTCGTTCACGAAGTCGGCGATGAAGCAGATCGGGTTTATGCACATCAAGCAAATTCTCAGCACAACAGACATAACCGACAACCCAaaaaacaaccacaacaacaacaaaattttggTGGTTGTAATTTTTATTACAATGCCGCCACCACTTGGGACGAGGGCTATGCCAATATTTTGCGCGATGTGAATAATGGCTCCTTTGCTGCTGCAGCGAACAATTTCTACAATTGTAATATGACAAATACTGCATTAGGGTGTGCCGCTGTAGGCTCGCAACAAGATAATGCACAAACACCGGCTGGCCAATGGAATTTCCCACCGATGACCGAGTTGGCGGCGCAGTCAAATGCGCAGCCGTGGCAGAGACAATATTGGCCGTCGCTCAACGATtttcagcagcagcagcaaacacaacgacaacaacaacaccaccaCCTGCAAgcgcaacagcaacaacaacatcgtagGCATGAgctagaacaacaacaacaattactaCGGCAACAACAAGCACAGCAAATGCCATTGCAGGCAAATCTGTGCCCAACAAATATTCACACATTGGAAAATTTAGGCAGAGACGAGGCGACAAAAGATTATCACCAGCAAAAATATAAAAGGCATGATTCTCTTCATCACAGCTACgaagctgctgctgctgctgctaatCGACGTAagacagcagcaacaacaacaacaataagtaATCTCTTGAATTTGGATAGCGATGAGTTGGCGAAAGCCACTGGCGGCGACGATGAGGAGATGCTGGTATTCAATGGAGAGGAATTGCAACTGTCGAACTTGTATATATCGACTTAG
- Protein Sequence
- MAEECQGGMHRKPNVPQQQQQQHQRQRQPQPQQTQSSALPTSNATAIIPSIVQQLTTSKSSRKDANAHVRIVEQPASRAIRFRYECERRSAGSILGVNSTAVRKTYPTIEVVGYSGRGVVVVSCVTKDPPYRPHPYILTGKEGCRKGVCTVEIGGEAMRYVFNNLGIQCVRKKDIDEALRMREEIRVDPFKTGFAHRSKMANGCSSVDLNALRLCFQVFIEDDYGRFTIPLPPVISDPILNKNSNSELTITEMCSSGTVLGNTQIMLLCEKVSKDDICVRFYEEKMEATAAGDQAVTAAGAAEETERNQGVIGGASWEAYGNFLPSDVHKQTSIRLKTPRYHNIYITHEVKVFVQLKRPSDGVVSDPWQFTYKPLDTSLALLRRKYCNASGGDGTQQRQLDAPVATTNMEKTPTKTAITATTNEFSIADLMVSEMQMMLRNSGATMTPSPQPSSPPTSFNPSCYNTNTIQLQNKLNSTSTPPKSPHEAEFSEFSLANVKREEATATATTTTPSTYLTEPGKPWDKHHLNEYGFVHEVGDEADRVYAHQANSQHNRHNRQPKKQPQQQQNFGGCNFYYNAATTWDEGYANILRDVNNGSFAAAANNFYNCNMTNTALGCAAVGSQQDNAQTPAGQWNFPPMTELAAQSNAQPWQRQYWPSLNDFQQQQQTQRQQQHHHLQAQQQQQHRRHELEQQQQLLRQQQAQQMPLQANLCPTNIHTLENLGRDEATKDYHQQKYKRHDSLHHSYEAAAAAANRRKTAATTTTISNLLNLDSDELAKATGGDDEEMLVFNGEELQLSNLYIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -