Ucar038686.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Urophora cardui
Gene Symbol
Su(H)
Assembly
GCA_960531455.1
Location
OY482674.1:125113991-125121939[+]

Transcription Factor Domain

TF Family
CSL
Domain
BTD domain
PFAM
PF09270
TF Group
Beta-Scaffold Factors
Description
Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.22 1.1e+04 -2.1 0.8 77 107 48 79 36 83 0.75
2 2 2.1e-68 9.7e-64 214.4 0.0 1 123 426 548 426 548 0.99

Sequence Information

Coding Sequence
ATGCAGAGCTCAAGCGATTTACTAATTGCCACCGCCAGCTCACCAACTATCAAAAACAGTCGGACAACCGCTATTGCAACAACCAAAATAGTCACAACATTGGATAAACATTTGGAAGATTTTTGCGCGACTGCTGCACCACAACTCAACCCTTTAGCTAACGatcaacaacagcagcagcagcaatcgTACCTTCTGCTACAGCAGCAACTACAACAACAGCACCAGCATCAAGAACAGCACTGGCACTTAGGCGAACTCAATACAAGCGAATCCTTATCATTAACACCACCCCGACCGTCATCGTCCTCTTCCTCTTCCACCAACAACACCTCAAAATCCTACACATTACAAACACAAATGCCACATTTTGGTTTGGGAGGAGCGACCGGCGTAGGGGGCGCTTATGCACACACCCCACCCAGTCCACCAGTACATCATGGCGCTGGCGGTGGTGGTATGATGCCGCCAAGTTCACCACAtcatcagcagcagcaacatCAGCAACAGCACCACCACctacagcaacagcagcagcagcaacaacaacaactccaCCATCAGCAACACCtccaacaacagcagcaacagcaacatcaTTTAGCAATGCTACCGCGTGGCCTAAACACTGGCGTTGGtgccggcggcggcggcggcggtggtGTCGGTTGCGGTCCACTCATGGCTACGGGCCTAAATTCCAATGCAATTGGCCTTAACTCTTATCGGCCGCATATTGAGGATAAAAAGTTGACACGTGAAGCGATGGAGCGTTATATGCGGGAACGCAACGATATGGTTATTGTTATCCTGCATGCGAAGGTTGCACAAAAGTCCTACGGCAATGAGAAGCGTTTCTTTTGCCCGCCACCCTGTATTTACCTTTTCGGTACCGGTTGGCGTCGCCGCTACGAGGAAATGTTGCAAAAGGGCGAGGGTGAACATTGCGCTCAATTGTGTGCCTTCATCGGTATCGGCAGCTCCGATCAGGATATGCAACAGCTCGATTTGAATGGCAAGCAATATTGTGCCGCCAAGACGCTGTTCATTTCGGATTCGGATAAGCGTAAACATTTTatgttatcggtgaaaatgttctATGGCAATGGGCACGATATTGGCGTATTCAATTCGAAGCGCATCAAAGTCATATCGAAACCGTCGAAGAAGAAACAATCGCTGAAAAATGCCGATTTGTGTATAGCGAGTGGAACGAATGTGGCGTTGTTTAATCGTTTGCGTTCACAAACCGTCTCGACGCGTTACCTGCATGTGGAGAATGGACATTTTCATGCGTCGTCGACGCAGTGGGGCGCTTTTACGATACATCTGCTGGATGATAATGAATCGGAGTCGGAGGAATTTCAGGTGCGTGATGGTTACATTCATTACGGCGCGACGGTGAAACTTGTTTGCTCTGTAACGGGCATGGCTTTGCCACGTCTAATCATACGCAAAGTGGATAAACAAATGGCTTTGTTGGAAGCGGATGACCCGGTGTCGCAACTGCATAAGTGCGCATTCTACATGAAGGACACGGatcatatgtatttgtgtttgTCGCAGGAGAAGATTATACAATTTCAGGCGACACCCTGCCCGAAGGAGCCCAATAAGGAGATGATTAATGATGGCGCCTGTTGGACGATTATATCGACAGATAAGGCGGAATATCAGTTTTATGAGGGCATGGGTCCAGTGAGCTCACCCGTCACACCGGTGCCAATTGTGAATTCGCTAAATCTGAATGGCGGCGGCGATGTGGCGATGCTAGAACTGAGCGGCGATAATTTTACGCCGCATCTGCAAGTTTGGTTCGGTGATGTAGAAGCGGAGACAATGTATCGCTGCACGGAGACGCTGCTGTGTGTGGTCCCGGAAATATCGCAATTTCGCGGCGAATGGCTTTGgGTGCGCCAACCAACACAAGTGCCGATATCGCTCGTACGCAATGATGGCATCATTTATGCCACCGGCTTAACATTCACCTACACACCAGAACCCGGACCGCGACCACATTGCACACAAGCCGAGGACGTGATGCGAAGTACGCGCAGTACAACAACAATAAGCAATAATAatggcggtggtggtggtggcggtggtGTACTAaacactaacaacaacaacaacagtttaAGTGGCCtaagcaacagcaacaataacaacaacagcatggCGCATTCGCCCAGCGATAGTAGTGGTGGCGGTGGAAATGTTGCTGGTAATAATGGTCCCACTGGCATGAATGCGAATCATCAGATGCATCAAACGCTGCCGTCCATGAGTGAGGTGCAATGGAATACGCACGGCGGTGGCGGACTCTCCTGA
Protein Sequence
MQSSSDLLIATASSPTIKNSRTTAIATTKIVTTLDKHLEDFCATAAPQLNPLANDQQQQQQQSYLLLQQQLQQQHQHQEQHWHLGELNTSESLSLTPPRPSSSSSSSTNNTSKSYTLQTQMPHFGLGGATGVGGAYAHTPPSPPVHHGAGGGGMMPPSSPHHQQQQHQQQHHHLQQQQQQQQQQLHHQQHLQQQQQQQHHLAMLPRGLNTGVGAGGGGGGGVGCGPLMATGLNSNAIGLNSYRPHIEDKKLTREAMERYMRERNDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLFGTGWRRRYEEMLQKGEGEHCAQLCAFIGIGSSDQDMQQLDLNGKQYCAAKTLFISDSDKRKHFMLSVKMFYGNGHDIGVFNSKRIKVISKPSKKKQSLKNADLCIASGTNVALFNRLRSQTVSTRYLHVENGHFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGATVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTDHMYLCLSQEKIIQFQATPCPKEPNKEMINDGACWTIISTDKAEYQFYEGMGPVSSPVTPVPIVNSLNLNGGGDVAMLELSGDNFTPHLQVWFGDVEAETMYRCTETLLCVVPEISQFRGEWLWVRQPTQVPISLVRNDGIIYATGLTFTYTPEPGPRPHCTQAEDVMRSTRSTTTISNNNGGGGGGGGVLNTNNNNNSLSGLSNSNNNNNSMAHSPSDSSGGGGNVAGNNGPTGMNANHQMHQTLPSMSEVQWNTHGGGGLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01180921;
90% Identity
-
80% Identity
-