Basic Information

Insect: Uropetala carovei
Gene Symbol: Rreb1
Assembly: GCA_036926305.1
Location: JAXCHB010000060.1:2511575-2523630[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0016 0.89 12.7 0.3 1 23 151 173 151 173 0.99

2 15 8.3e-06 0.0047 19.9 0.2 1 23 202 224 202 224 0.98

3 15 2.8e-06 0.0016 21.4 2.5 1 23 230 252 230 252 0.99

4 15 0.015 8.7 9.6 0.1 2 23 339 361 338 361 0.91

5 15 3.4 1.9e+03 2.3 1.7 1 22 447 468 447 470 0.79

6 15 0.033 19 8.6 0.3 1 23 646 668 646 668 0.98

7 15 0.059 33 7.8 2.1 1 23 686 709 686 709 0.96

8 15 0.024 13 9.0 3.6 1 23 715 738 715 738 0.97

9 15 0.019 11 9.4 4.9 1 23 1200 1223 1200 1223 0.95

10 15 0.0039 2.2 11.5 0.4 2 23 1566 1587 1565 1587 0.97

11 15 0.14 78 6.6 5.2 1 23 1593 1616 1593 1616 0.97

12 15 0.0027 1.5 12.0 0.9 1 23 1670 1694 1670 1694 0.93

13 15 0.018 10 9.4 1.0 1 23 1874 1897 1874 1897 0.96

14 15 0.013 7.1 9.9 0.4 2 23 1964 1985 1963 1985 0.94

15 15 0.01 5.7 10.2 4.5 1 23 1991 2013 1991 2013 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0016	0.89	12.7	0.3	1	23	151	173	151	173	0.99
2	15	8.3e-06	0.0047	19.9	0.2	1	23	202	224	202	224	0.98
3	15	2.8e-06	0.0016	21.4	2.5	1	23	230	252	230	252	0.99
4	15	0.015	8.7	9.6	0.1	2	23	339	361	338	361	0.91
5	15	3.4	1.9e+03	2.3	1.7	1	22	447	468	447	470	0.79
6	15	0.033	19	8.6	0.3	1	23	646	668	646	668	0.98
7	15	0.059	33	7.8	2.1	1	23	686	709	686	709	0.96
8	15	0.024	13	9.0	3.6	1	23	715	738	715	738	0.97
9	15	0.019	11	9.4	4.9	1	23	1200	1223	1200	1223	0.95
10	15	0.0039	2.2	11.5	0.4	2	23	1566	1587	1565	1587	0.97
11	15	0.14	78	6.6	5.2	1	23	1593	1616	1593	1616	0.97
12	15	0.0027	1.5	12.0	0.9	1	23	1670	1694	1670	1694	0.93
13	15	0.018	10	9.4	1.0	1	23	1874	1897	1874	1897	0.96
14	15	0.013	7.1	9.9	0.4	2	23	1964	1985	1963	1985	0.94
15	15	0.01	5.7	10.2	4.5	1	23	1991	2013	1991	2013	0.98

Sequence Information

Coding Sequence: ATGGAGATAACCCGTGCAGACAAAGAGAAATGTGAAAACGACGAAGCGGAAGAAGAGAGTGAAAAAGTCgatgaaaaagaagaagaagatgaagaggagGAATCGATGGATGGGGTCGAGGGTGCGGCGGAAAAGGTGCGGGAAAGAGAGGCAAGAAGGTGCACCAAGGGCGCCGCTGCGGAGCTCGAATCGGGATTGACGGGGGCCAAGAAAAGAAAGTCCAACAAAGTGGTGAAGCGAGAGGTGTGTGTGAGTGGTGCCTTATCTGTTTTCTTCATATCTCGCTCTTTGGAGCCGCGAATGGAACCCGTCGTTCTCGAAATCGTTCCGGATGCCGCGGAGGAAGCAACGGAGGCCGAAGAAGGGAAGGCAGAGGAAGAGGAATCATCCCCCGAGGAAGGTCGAGGAGATGAGACGCGAGCACAGCGAACGGACGAGGAGGACGTGCGCTACGTTTGTCCCATCTGCGAGGACGTGCTGAGCTCCCAACACCTGTTCACGGTACACATTCGTTCCCACAACGACGTCCGCGCGGGCGCGCCCTCCGATGCTTCTGCAACGTATTCCGCCGGCGTCGCAGCGTCCACCGGTGGTCTCAAGGCCTTCAGCTGTCGCATTTGCGGAAAAGCTCTAAGCTCATCCAGTTCGCTGGACAGGCACATGTTGGTCCACTCTGGAGAACGGCCGTTCAAATGCAGGCTCTGCGGCGTGGCCTTCACGACGAACGGAAACATGCACCGACACATGAGGACGCACGCAGCCAACTCCTCCGCCGGAAAGGACCCGGAAGAGGTGAGCGACTGCGGAAGCTCGGACAGCGGAGGATCCAAGAAGGGGAAGGTAACGCCGAAAAAGTCTCGAACTTCGACGCCCGCCACCACTCCGTCCCCGGGGAGCGTAAGAAAGAGGCAGGCCAACGGCGGCTCGGTCGACCCGATCAAGGTCCAAGGAAAAGGAAACGGAGGTTCGCCTAGGAGAAGAGCGGCGAAGGAGGCGGCGTCCGACCTGGGGTGGCGGTGTCTCGCTTGCGACATATCGTTCAGGAACCAAAGAGCCCTCCGTCTGCACGCGTACATGGCGCACAGAGAGCTAGAaccggaggaggaagaggaagacgacttggaggaggaggattgcgaggaagaggaggagagaggcagCGGACGCAAGCGGTCCAGGAGAGACGGAGGAGAAACGAGTTCTTCCGGGACGATGCAGACGCCCACATTGGGTTTCCAAGATTTGACCTTCGTGGACTTCTCCACGCAGAAGTTTCCCCTGATAGCTCGCGCCGCTTGCGAAAAAGCCGTCCACCGCGCTTCTAGCGAATTCCACCGATTCCACTGCGGACTCTGCGGCCGCGCTTTCCCCTGTGGTTCCGCCCTCCACATCCATGCGGATTCGCAGCATCGAGCCGCTTCTGCGTCGCCGGCCGCAGCCGCTCCGCCCACGGCAGACGACCCGAAAGAAGATTTCTTCGCCGTCCTGAACCTGCAGAACAAAACGAGGTGCGGTTCGTCCCCGCCTCCTCCCGTTCAGGGCAGCCTGCCTCCTGCTCACCTCCGCCTTTTCCCGCACCCAAACTCCCCCTCGCTGTCTCACCTGCCATAcgccgagagaaagagaagggaggaagaattCGACAACGCGTTCTACTTCAACAGCCCCGCAATGAAACCAAAGGATCTCCATGCAAAAAAAGGAACTTCCGAGGAAGAGGATGACGATAGAGAAGCGTCCGAGGCGCCGAGAGATTTGGCTGACATAAACAGCATAATATCGGCAGTAGCGGGTAACGCGTCCGCACTGATGAGGTCGGTggaagaggatgaggaggatGAACTAGGAGGAGGAtacgaagaggaagaggaggagcaAGAGGAGGAAGACGCGACGTTCGCGGCAGAGCTGCGAGAAATGAAGACGAGGGGAGAATTCCCTTGCAAGATGTGTTCCAGCATCTTCCCTAATTTGCGCGCTCTCAAAGGACACAGCCGCAGTCACATTTCCGACATAGTGGACGCATCCccgggagaagaagagggagcgCATCGCTACCCTTGCTGTCTATGCGGACGTCGCGTCGCATCCGACAAACATGGGCTGATGCGTCATCTCCGCTCTCACAACGGCGAGCGGCCGTATCGCTGCGCGCTCTGTCGCTTCGCATTCACCACCAAAGCTAATTGCGAGCGACACTTGAGAAACAGACATTCGAAGGCTTCTAGGGAAGAAATTAGGCGATCGGTAATTTACTCGCCGGTCGCTGACGAGAGTTCGACCGGCCATCCGAGTGCAGAAACCGAAGAGAAGGGAAGGCAGGAGCTGGCGTGCGTGTCGCAATGCATCGCCGCTGCCTCGTCTCCCGTCCCGACGAAGCTGTCTGCCTTGCTGACGGCAATAACCGAACCAAAGAGCAGTTTACCGCCTTCCGATTCTTTCGGGATGGATGCGGACCATAAGGACTGCAATTTGCGGATGAGCAGCAGAGAGTGTGGGAACATGGAGGACCTGTCCAGTGTTGAAGCTCTGGTCAATTTCACCAAAAGCCCCTCTCTTCCACCGCCACTTTCGATGATGAGCGGTCAACTTTCTCTTTCCATGCAGCAACATCTTTTTCGTCCAATAGCTGTAAAACAGGAACTAGTTAAAGACAGCATTAGCTCCGAAGCTCCGTTGGATCTGAGTATGGATGCCCTCGATTTGAGCAGTAAAAAAGTACAAGACGAGCCCGAAGATCTGTCGAGGCCAGCTGTTGAGAAATCGCGACCAATTATTCCGGGGACGGCGGGACCGATAGGCGTAGGTTTCAACGGGGGACTGTTGATGCCGGTACGGCTACCCGCGACGCCAACTGCTAGGTCGATGGTACCAACGGCCTCTTCGGAAAATTCTCCGATATCTCAAGTGTCGAAGATGGACCCTGCATCCGTTTCTCTATCGAACGGATCATCGAGAGTGGACATTTCCGCAACCAATCCACCATCTGCTCCCTCTTTTTATCCCAATCCTCTCCAAATGTACCTAAATTCGCAATTCCCAGCGGCCTCGTCCGCGAGGCCCCCCGTCGGAAACTTCCCATACCTCTTGCCTCTTCCTTTCCCGAGTTCCTCGGCCCCTCTGATTTCGCAGCTGCAGACCACGCAGGCCCAATCTCCGTCGCTGCGTCCCCCGCCGCTCCCGTCGCCGTCCATCAGCCAACCTTCTCACAACGTAACGCCTTCTTACCCGGGAATGTCTGCATCCACCGCCCCGCCATCTATGGAGCGcctcgaaaaagaaattctcCGTAACTTGCACCTCTCTTCGGGAGGATCACTCGTTCTAGATGCAGCTTCGGTCGCCGATAGGATCCAAGCGATAGCGATGGCTGCCGCGGCCGCTGCAGGCTTCCCTCCCGCACCGGCCTCTTCGGAGCATCCTCCCAAGTCGTCCCAAACCAAAGAATCAAAACCGAGCGACCCAAATATCGCATCGATGCGAGAGGTGGCTTCGTCTAAAGAGGACCATAGAATGCAACCTGGAGTGAAAATGGTAATAAAAAACGGTGTGCTGATGCCCAAGCAGAAGCAGAGGAGATATCGCACCGAACGACCGTTCGCTTGCTGTCACTGCTCGGCGCGCTTCACGCTCAGATCAAATATGGAGAGACACATAAAGCAGCAGCATCCGGAATTTTGGAGTCAGAGACCGAGAGGAGGAAGACGCGGTGGAAGCTCCGGCCTTTCTGGAGCGACGTCTTCGCGAACGGACGCTTCTCCGTCGGCGGCCGATGCGAGGCTCTCAAACTCTCCCGATGGCCCGCTGCCACCGGCGGCTTCATTACCAGCCGAATCAGCAGGGAAACCTATCAGCGAAGATGGCTGTTCGGAAGACTATAGAGACGACGACGTGAACGTTGAAGAaggagaaaataataacatgcacTCATTACCAGAAGACAGAGTTTCCATTCCCGAGTCTTCGACAAATCTCGATGATCCAAATAATAAGGCCAAAGATAGTAATAAGACAGTGATCTCAGAGGAGGTGAAGAACGCTATTGCTCAGCAACTCAAATCAAAGCTTATCGCCGATTGCCGACACGTTGTCAGCCCTTTATATGGGGGAGAGGAGGCAAAAAGGATAGATGccaaagaggaggggaagaagacCACCAAAGACTTTAAAGGTGAAAGCAACGCGGACGACGAGGAAGACAGTGGTGAACTTGTAATAGACGAGGAGAAAATGGACACGGAAAACGACTGCAGCGCGGGGAAACGAAGGAATTCGGGGTGCCCTGTAACCAAAGAGGATGAGTCCAGCGGTGTGGACCTAGCCAGCGTCTCTAAGTTGTTGGACAATGCTTCCACTCAGACTTTTCAGCAGTATTTCAAATCGGAGGAAGACGACGAGATGGAGGAAACGGATCGAAGGGGtggagaaagaggtggaggagaCGAAGGGTACGAGGGCGGGGAGGATGGCGAGgacgaggaggaagaggaggggtggAAAAGCGGGGACGAGACAGGCGGGAGCAAGGGGACATCCTCTGGAGAGGAGTGCTCTTctaggggaggaaggggagacgACAGAGACGACAGCCTCGAACGCAAATTAGCCTCCGTTACAGTCGAAGCCGCGACGGCCGCCGACACCGAAGACAAAGGCAAACGGCGCAGCGCTTACTCATCTGCGCCGAATCGGGTTTCCTGTCCTTATTGCATGAGGAAGTTCCCTTGGCGCAGCTCGCTCAGGCGACACATCCTGACGCACACCGGCCAGAAGCCGTACAAGTGCGCCCATTGCCCTCTGCTATTCACCACCAAGTCGAACTGCGACCGCCATTTGCTTAGGAAGCACGGCAGGGGCAGCGGAGGGGCGGGCGGAGGGTGCGGGGGGAATAGCAGCGGCGCCGAAGATGCGGCGCCCGTCGTCGCTTCGTCGGTAGGCGGTGTTTCTCCGGGAGGAGGCGGCGCCGCCTCCGGCGCCTACACTATGCGTAATGTTCCGGAGCGGCCCTACAAATGCAACGTATGTCCCAGTTCTACCTTTTCCACTCAGAATAACTTGAAAAAACACCTGGCTGCGAAACACCAGAACCTTCAACCTCCGCATCAGAGTCACAGCGGTAGATCGTCGACTTCGCCTCGGGGAAGTTCCGAAAAGGGAGGGTCGGCTTCTTCGGCCAGCAGTCCACGTTGCGCCACAGAAGAAAGGGACGTGGACGACGAAGAGGACGAGGAAGGTCTTGTCGGTGCGGAGGACGAAGAAGGGGTGCtggatgaggaggaagaggagtttGAGGAGGAGGAATTTGCAGAGGTCAGCGGAGGCGAAGCGGTTTGCAACGGAGAGACCAAAGGCACCAGAAGCCAGGGTAATTCCAACAGGAAAAGGGAGGTGACACAGCCATCCTCGAAGAATGTAGAAAGACACTCTGAGCACGGCAACCAGAATAACAGACAGCTCAATGGCAGTGTGGCATCATCGTCAGCGGACGAAGGGGAGCGAGGGAAAGCTGGAGATAAGTCGCGATCCACTCCACCGCCGCACCAGCAAAATAATCAGGTGCACCTACATCACCAACATcaccatcaccaccaccaccaccaccctgGCTCCGATCTTCCTTTCAAGTGCCATCTTTGCGAACGTAGTTATGCCGAGAGAAACGATGCTCTGAATCATATACGGGATTCTCATTCATCCGAGTACGAGCTACTGGTTGCTAAGGGTGCTCTCGACTCAGCTGCTGCCGTTCCTTCAGAAGATTCCCAAAATAATAACAATCATCAAGGTGGTGCTAACAACAATAACATCGGAGGGATGGAACATGTGGCCGGGGAGGAAAACTTGGAACAGCTTCGAGGGAAGTTTCCCGACTATGCCAACAGAAAGGTGGTTTGCGCATTCTGCATGCGTCGCTTTTGGTCTGCCGAGGATCTTCGGCGGCACATGAGGACTCACACGGGAGAGCGACCTTTTTCCTGTGACATATGCGCTCGACGCTTCACTCTGAAGCACAGCATGCTTCGGCACCGAAAGAAGCACTCTCCGGCAGAAAGAGGAAATCCATTAGCAGTAGCCACCTCTGAAGCAAGCGACGAGGAAGCCATGGCAACTAGACAAAAGTCAGGAGATTCTATCACCGGCCACACCAATTGGGAGAAGCTCCCTGGCAAGGATGAGGAAGGAAAAAGACGAAAACTTGCTCCTCAACAAGAGATTGGACTGGCGGCAGCTGCGAGAGCCATCGGCGGAGCAGCTGGTGCTGGGGACTTGATTGGAAATTTACTGGGAATTCAAGATGGTTCTATAATTGACAAGATGCTACTCTCCAAATCGGCCAATGATGCAGCCAAACTTTTAGGAGTTGAAGGCCATGACTGA
Protein Sequence: MEITRADKEKCENDEAEEESEKVDEKEEEDEEEESMDGVEGAAEKVREREARRCTKGAAAELESGLTGAKKRKSNKVVKREVCVSGALSVFFISRSLEPRMEPVVLEIVPDAAEEATEAEEGKAEEEESSPEEGRGDETRAQRTDEEDVRYVCPICEDVLSSQHLFTVHIRSHNDVRAGAPSDASATYSAGVAASTGGLKAFSCRICGKALSSSSSLDRHMLVHSGERPFKCRLCGVAFTTNGNMHRHMRTHAANSSAGKDPEEVSDCGSSDSGGSKKGKVTPKKSRTSTPATTPSPGSVRKRQANGGSVDPIKVQGKGNGGSPRRRAAKEAASDLGWRCLACDISFRNQRALRLHAYMAHRELEPEEEEEDDLEEEDCEEEEERGSGRKRSRRDGGETSSSGTMQTPTLGFQDLTFVDFSTQKFPLIARAACEKAVHRASSEFHRFHCGLCGRAFPCGSALHIHADSQHRAASASPAAAAPPTADDPKEDFFAVLNLQNKTRCGSSPPPPVQGSLPPAHLRLFPHPNSPSLSHLPYAERKRREEEFDNAFYFNSPAMKPKDLHAKKGTSEEEDDDREASEAPRDLADINSIISAVAGNASALMRSVEEDEEDELGGGYEEEEEEQEEEDATFAAELREMKTRGEFPCKMCSSIFPNLRALKGHSRSHISDIVDASPGEEEGAHRYPCCLCGRRVASDKHGLMRHLRSHNGERPYRCALCRFAFTTKANCERHLRNRHSKASREEIRRSVIYSPVADESSTGHPSAETEEKGRQELACVSQCIAAASSPVPTKLSALLTAITEPKSSLPPSDSFGMDADHKDCNLRMSSRECGNMEDLSSVEALVNFTKSPSLPPPLSMMSGQLSLSMQQHLFRPIAVKQELVKDSISSEAPLDLSMDALDLSSKKVQDEPEDLSRPAVEKSRPIIPGTAGPIGVGFNGGLLMPVRLPATPTARSMVPTASSENSPISQVSKMDPASVSLSNGSSRVDISATNPPSAPSFYPNPLQMYLNSQFPAASSARPPVGNFPYLLPLPFPSSSAPLISQLQTTQAQSPSLRPPPLPSPSISQPSHNVTPSYPGMSASTAPPSMERLEKEILRNLHLSSGGSLVLDAASVADRIQAIAMAAAAAAGFPPAPASSEHPPKSSQTKESKPSDPNIASMREVASSKEDHRMQPGVKMVIKNGVLMPKQKQRRYRTERPFACCHCSARFTLRSNMERHIKQQHPEFWSQRPRGGRRGGSSGLSGATSSRTDASPSAADARLSNSPDGPLPPAASLPAESAGKPISEDGCSEDYRDDDVNVEEGENNNMHSLPEDRVSIPESSTNLDDPNNKAKDSNKTVISEEVKNAIAQQLKSKLIADCRHVVSPLYGGEEAKRIDAKEEGKKTTKDFKGESNADDEEDSGELVIDEEKMDTENDCSAGKRRNSGCPVTKEDESSGVDLASVSKLLDNASTQTFQQYFKSEEDDEMEETDRRGGERGGGDEGYEGGEDGEDEEEEEGWKSGDETGGSKGTSSGEECSSRGGRGDDRDDSLERKLASVTVEAATAADTEDKGKRRSAYSSAPNRVSCPYCMRKFPWRSSLRRHILTHTGQKPYKCAHCPLLFTTKSNCDRHLLRKHGRGSGGAGGGCGGNSSGAEDAAPVVASSVGGVSPGGGGAASGAYTMRNVPERPYKCNVCPSSTFSTQNNLKKHLAAKHQNLQPPHQSHSGRSSTSPRGSSEKGGSASSASSPRCATEERDVDDEEDEEGLVGAEDEEGVLDEEEEEFEEEEFAEVSGGEAVCNGETKGTRSQGNSNRKREVTQPSSKNVERHSEHGNQNNRQLNGSVASSSADEGERGKAGDKSRSTPPPHQQNNQVHLHHQHHHHHHHHHPGSDLPFKCHLCERSYAERNDALNHIRDSHSSEYELLVAKGALDSAAAVPSEDSQNNNNHQGGANNNNIGGMEHVAGEENLEQLRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICARRFTLKHSMLRHRKKHSPAERGNPLAVATSEASDEEAMATRQKSGDSITGHTNWEKLPGKDEEGKRRKLAPQQEIGLAAAARAIGGAAGAGDLIGNLLGIQDGSIIDKMLLSKSANDAAKLLGVEGHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01402303;
90% Identity: -
80% Identity: -