Thag098562.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tanypteryx hageni
Gene Symbol
RREB1
Assembly
GCA_028673005.1
Location
CM054117.1:113167203-113177393[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0026 1.9 11.8 0.3 1 23 489 511 489 511 0.98
2 13 7.7e-06 0.0054 19.8 0.2 1 23 540 562 540 562 0.98
3 13 2.6e-06 0.0018 21.3 2.5 1 23 568 590 568 590 0.99
4 13 0.014 10 9.5 0.1 2 23 679 701 678 701 0.91
5 13 3.1 2.2e+03 2.1 1.7 1 22 789 810 789 812 0.79
6 13 0.0049 3.4 11.0 0.2 1 23 987 1009 987 1009 0.98
7 13 0.35 2.4e+02 5.1 2.8 1 23 1027 1050 1027 1050 0.92
8 13 0.022 15 8.9 3.6 1 23 1056 1079 1056 1079 0.97
9 13 0.017 12 9.2 4.9 1 23 1543 1566 1543 1566 0.95
10 13 0.0036 2.5 11.4 0.4 2 23 1909 1930 1908 1930 0.97
11 13 0.13 89 6.5 5.2 1 23 1936 1959 1936 1959 0.97
12 13 0.0025 1.8 11.9 0.9 1 23 2013 2037 2013 2037 0.93
13 13 0.0035 2.5 11.4 1.0 1 23 2217 2240 2217 2240 0.96

Sequence Information

Coding Sequence
ATGGAGATAACCCGTGCAGACAAAGGGAAAGGCGAAAATGATGAAGCGGAAGAGAGTGAAAAAGTCGATGAGAAGGCTGAGGAGTCGATggatgaggaggggaggagggaggggggggaagggaatgggagggaggggaaaggagggaatggggaaggagggaagggggaggagagatcgGCGAGGTGCGCGAAGGGCGCTGGGGAGCTGGAGTCGGGATTGACAGGAGCCAAGAAGAGGAAATCCAACAAAGTCGTGAAGCGTGAGCGCCGTAAGTTCCTcatcctttccccttccttcccctccccttcctctccctccccttcatcGATATCCCCtgcctcccattctcctccctccctctctaattcttcccccttccttcccctcttactctacctccccctcctcttctttcccctcccctttccccaccttccccctccccttcctcccccactctcctccccctccacctaccccttctccccctctccttttccccttctcctcctcccccttctcctcctcttccttcttctcctccccttctttcccccttcttctcctccccttctttccccctcctcttcctccccctccatctccccctcccctcctctcccaccctccccctccccttctcctcctcctctcccctttcccctctccttccttctctcctccacctcctccatccccatcctttccctcctccccattcccaTCAGCTcattattcctcctcctcatccctctcttcatccaccttctcctctcccctacctccccctccccttcttaccccctccccttcttacccccctccccttcttactccctccccctcctcctaattctcctccccctccccttctttacCTCTTCCCTtcctaccctctcccctccccttctcctcctcctgctcctctttcccctcccctttccccttccatccctcttcctcctccctccccttcctttccctcctcatccccattcccttctcctcctcatccctctcttcatccacctcctcctctcccccctccccttctcttttctcctccccttccttccctcctcctccccttcctactccctctccttctctccctccatacgagggttcaatcaatcaatcaatcctcctcctccccctccccttcttttccccttccctgccttccctcctccacctcctcctccctccccatcctttccctccccctcctctccctccccatccccgtatgtctgtctgtcctcatccacctctcctccacctcctTTGGAGCCGCGATTGGAACCCCTCGTTCCCGAAATCGTTCCGGATGCCGGGGAGGGAGGAACGGAGGCAGTTGGAGGGAAGGCAGAGGAAGAAGTCGCGGCTGAGGAATCATTTCCCGAGGAAGGTCGAGGGGAGGAGACACAAGTCCAGCGGGTGGACGAGGAGGATGTGCGCTACATTTGTCCCATTTGCGAGGACGTGCTGAGCTCCCAACACCTATTCACGGTGCACATTCGTTCCCACAACGACGTCCGCACCGGCGCCTCCTCCGATGCTTCCGCAACGAATTCTACCGGCGTCGCAGTGTCCGCCGGCGGCCTCAAGGCCTTCAGCTGTCGCATTTGTGGAAAGGCCCTAAGCTCATCCAGCTCCCTGGACCGTCACATGTTGGTCCATTCGGGCGAACGGCCATTCAAGTGCAGGCTGTGCGGCGTGGCCTTCACGACGAACGGAAACATGCACCGCCATATGAGGACGCATGCAGCCAACTCCTCCGCCGGAAAGGATCCGGAAGAGGTGAGCGACTGCGGAAGCTCAGACAGCGGAGGATCCAAGAAGGGAAAGGTGACACCGAAGAAATCTCGAACATCGACGCCCGCCACCACACCGTCCCCAGGGAGCGTTAGAAAGAGGCAGGCCAACAGCGGCTCGGCAGATTCGATCAAGATCCAGGGAAAAGGAAACGGCAGTTCGCCCAGGAGAAGGGTGGCGAAGGAGGCGACGGCGGCGTCCGAGCTGGGCTGGCGCTGTCTCGCTTGCGACATATCGTTCAGGAACCAGAGAGCCCTCCGTCTGCACGCGTACATGGCACACAGAGAGCTAGAgccggaggaggaagaggaagacgaCTTGGAGGAGGAAGACtgcgaggaagaggaggaagaagaggagagaggcggcGGACGAAAGAGGTCCAGGAGGGACGGAGGGGAGACGACGAGCAGGACGATGCAGACGCCCACGCTGGGTTTCCAAGATTTGACATTCGTGGACTTCTCGACGCAGAAGTTTCCTCTGATAGCTCGTGCTGCTTGCGAAAAAGCCGTCCACCACGCTTCGAGCGAATTCCACCGATTCCACTGCGGGCTCTGCGGCCGTGCCTTCCCGTGCGGCTCGGCACTCCACATCCACGCGGATTCGCAACATCGTGCCGCATCTGCGTCGCCGGCCGCGGCTGCTCAGCCCACGGCAGACGACCCGAAAGAGGATTTCTTCGCCGTCCTGAATCTGCAGAACAAAACGAGGTGCGGCCCGTCCCCGCCTCCCGGTCAGGGCAGCCTGCCACCTCCCCACCTTCGCCTCTTCCCACACCCCAACTCGCCATCGCTCTCCCACCTGCCATacgcagagagaaagagaagggaggaagaattcGACAACGCGTTCTACTTCAACAGCCCCGCAATGAAGCCGAAAGATCTTCATGCAAAAAAAGGAACTTCCGAAGAAGAGGACAGCGGCAGGGAAGCGTCCGAGGCGCCTAGAGACTTGGCTGACATAAACAGCATAATATCGGCCGTAGCGGGTAACGCGTCCGGATTGATGAGGTCggtggaagaggaagaggaggacgaaCTAGGAGGAGGgtacgaggaggaggaggaggaacaaGAGGAGGAGGACGCATTGTTCGCGGCAGAGCTTCGAGAAATGAAGACGAGGGGCGAATTCCCCTGCAAGATGTGTCCCAGTGTCTTTCCTAATTTGCGCGCTCTCAAAGGACACAGCCGCAGTCACATTTCCGACATAGTGGACGCATCCCCGGGAGAAGATGACGGTGCGCATCGCTACCTTTGCTGCCTTTGCGGCCGTCGCGTCGCCTCCGATAAACACGGGCTAATGCGCCATCTCCGCTCTCACAACGGCGAGCGTCCATATCGCTGCGCACTCTGCCGCTTCGCGTTCACCACCAAAGCTAATTGCGAGCGACATTTGAGAAACAGACATTCGAAGGCTTCTAGGGAAGAAATTAGGCGATCGGTAATTTATTCGCCGGTCGCTGATGAGAGTTCGCCCGGCCATCCAAATGTAGAAACCGAAGAAAAGGGAAGGCTGGAGGTGTCGTGCGCGGCTCAATGCATCGTTCCTGCCTCGTCTCCCATCCCGACGAAGCTATCTGCCTTGCTGACGGCAATATCCGAGGCCAAGAGCAGTTTACCGCCTTCCGATTCTTTTGGGAGGGATGCGGACGATAAGGATTGCGATTTACGGATGAGCAGCAGAGAATGTGGGCACATGGAGGACTTGTCTAGCGTGGAAGCTCTGGTCAATTTCACCAAAAGCCCGTCTCTTCCACCGCCACTTTCGATGATGAGCGGTCAAATTTCTCTTTCCATGCAACAGCATCTGTTTCGTCCGATAGCCGTAAAACGGGAACCAACGAAAGACGGTGTTGCGGTTAGCTCCGAAGCTCCGTTGGATCTGAGCATGGATGCCCTCGATTTGAGCAGTAAAAAAGTACAAGATGAGCCCGAAGATCTGTCGAGGCCAGCTGTTGAGAAATCGCGTCCAATTATTCCGGCGACGGTAGGACCGATAGGCATAGGCTTCAACGGGGGACTTTTAATGCCGGTGCGGCTACCTGCGGCACCAACTGCCAGGCTGATGGTGCCACCGGCCTCCTCGGAGAATCCTCAAATATCTCAAGTGCCGAAGATTGATCCTGCACCCGTTTCTCTTTCGAACGGGACATCGAGAGTGGATATTTCCGCCACCAATCCGCCGTCTGCTGCCCCGTTTTATTCCAATCCTCTCCAAATGTACCTAAATTCGCAATTCCCAGCTGCCTCCGCCAGGCCTTCCGCCGGAAACTTCCCTTATCTACTGCCTCTCCCTTTTCCGAGTTCCTCGACCCCTCTCCTTCCGCAGCTTCAGACCACGCAGGTCCAATCTCCGTCGCTGCGTCCACCGCCGCTCTCGTCGCCGTCCATCGGCCAACCTCGCAACGTAACGCCCTCTTACCTTCATCCGGGAATACCTGCATCCCCCGCCCCGCCATCCATGGAGCGTCTCGAAAAAGAAATACTCCGTAACTTGCACCTCTCTTCCGGAGGATCGCTCGTTCTAGATGCAGCTTCGGTCGCCGATAGAATCCAGGCGATAGCTATGGCTGCCGCAGCGGCTGCAGGCTTCCCTCCCACAGCCGTCGCTTCGGAGCATCCTCCGAAGTCGTCCCAAACCAAAGAATCAAAACCGAGCGATCCGGCCGTCGCATCGACGCGAGAGGTCGCATCGTCGAAAGAGGACCCAAGAATGCAACCTGGAGTTAAAATGGTAATAAAAAACGGCGTGCTGATGCCCAAGCAGAAGCAGAGGAGATATCGCACCGAACGACCGTTTGCTTGTTGTCACTGCTCTGCTCGCTTCACGCTCAGATCCAACATGGAGAGACACATAAAGCAACAGCATCCGGAATTTTGGAGTCAAAGGCCGAGAGGAGGAAGACGCGGTGGAAGCACCGGTCTTACCGGAGCGACATCTTCGCGAACGGACGCTTCTCCGTCGGCGGCCGATGCGAGGCTCTCCAACTCTCCCGATGGACCGCTGCCACCGGCGGCTTCACTACCGGCCGAATCAGCGGGAAAACCTATCAGCGAAGATGGCTGTTCGGAGGACTATAGAGACGACGACTTGAACCTGGAAGAAGCAGAAAATAATAATATGCACTCATTACCTGAGGACAGAGTTTCCATTCTCGAGTCTTCGACAAACCACGATGATCCAAATATTAAGGCCAAAGATAGTAATAAGACAGTGATCTCAGAGGAGGTGAAGAACGCTATTGCTCAGCAACTCAAATCGAAGCTTATCGCCGATTGCCGACCCGTTACGAACCCTTTGTTCGGGGGAGAGGAGGCAAAAAGGATAGATGCCAAAGAGGAGGCGAAGAAGACCACCAAAGACTTAAAAGGTGAAAGCAACGCAGACGACGAGGAAGACAGTGGTGAACTAGTAATAGATGAGGAGAAAATGGACACGGAAAACGACTTTagagggggaaaaggaaggaATTCAGGGTGTCCCATAACCAAAGAGGACGAGTCCAGCGGTGTGGACCTAGCCAGCGTTTCTAAGTTGTTGGACAATGCTTCCACTCAGACTTTTCAGCAGTATTTCAAATCGGAGGAAGACGACGAGATGGAGGAGACGGATCGAAGGGGCGGAGAACGCCGCGGAGGAGACGAAGGGTACGAGGGTGGGGAGGATGgcgaggatgaggaggaggaggaggggtggaaaAGTGGCGATGAGACGGGCGGGAGCAAGGGGACGTCCTCCGGGGAGGAGTGTTCTTCGAGGGGCggaaggggagaagaaagggacGACAGCCTCGAACGCAAGTTAGCCTCAGTTACCGTCGAAGCCGCCACGGCCGCCGACACCGAAGACAAGGGCAAACGGCGCAGCGCTTACTCATCTGCACCGAATCGAGTTTCCTGTCCTTACTGCATGAGGAAGTTCCCCTGGCGTAGCTCGCTCAGACGGCACATCCTGACCCACACCGGTCAGAAACCGTACAAGTGCGCCCATTGCCCTCTGCTCTTCACCACCAAGTCGAACTGCGATCGCCACTTGCTGAGGAAGCACGGCAGGGGCAGTGGAGGGATGGGCGGAGGGTGCGGAGGTAGCAGTAGCGGCGCCGAAGACGCGGCGCCCGTCGTCGCCTCGTCGGGGGGGGACGGTGTTTCTCCGGGAGGAGGCGCCACCTCCAGCGCCTACACTATGCGTAACGTTCCAGAGCGACCATACAAGTGTAACGTGTGTCCCAGTTCTACCTTTTCGACTCAGAACAACTTGAAGAAACACCTCGCCGCGAAACACCAGAACCTTCAGCCTCCGCATCATAGTAACAGCGGAAGATCGTCGGCGTCGCCTCGCGGAATTTCCGAAAAGGGAGGATCGGCTTCTTCGGCAAGCAGTCCCCGGTGCGCCACAGAGGAAAGGGACGTGGACGATGAAGAGGACGAGGAAGGTTTGGTCGGTGCGGAGGATGAAGAAGGAATGCtggatgaagaggaggaggaagaggagttcGAGGAGGACGAATTTGCAGAGGGCAGCGGAAGCGAAGCGGTTTGCAACGGAGAAACCAAAGGTCCTCGAAGTCAGGGTAATTCCAACAGGAAAAGAGAAGTGACGCAACCAAAGAACATAGAAAGAAATTCGGAACAAAGCAACCAGAATAGACAGCGGCTCAATGGCAGTGTGGCGTCGTCGTCAGCAGACGAAGGGGAGCGAGGGAAGGCATTGCGATCCACTCCACCGCCTCACCAGCAAAATAACCAGGTGCATCTTCATCACCAGCACCAACACCACCagcaccaccatcaccaccaccaccctggCTCCGATCTTCCTTTCAAATGCCATCTTTGCGAGCGTAGTTACGCCGAACGAAGTGATGCTCTGAACCATATAAGGGATTCTCATGCTTCCGAGTACGAACTACTGGTCGCTAAAGGCGCTCTCGACTCTGCCGCTGCTGTCTCTTCGGAAGATTCCCACAATAATAATCATCAAGGTGGTGCTAACAACAACAATAATACCACAGGGGTGGAACATGTAGCCGGGGAGGAAAACTTGGAACAACTTCGAGGGAAGTTTCCTGACTATGCCAACAGAAAGGTGAGCAGAGACTTTGGAATATTAGTGAAGGAATAG
Protein Sequence
MEITRADKGKGENDEAEESEKVDEKAEESMDEEGRREGGEGNGREGKGGNGEGGKGEERSARCAKGAGELESGLTGAKKRKSNKVVKRERRKFLILSPSFPSPSSPSPSSISPASHSPPSLSNSSPFLPLLLYLPLLFFPLPFPHLPPPLPPPLSSPSTYPFSPSPFPLLLLPLLLLFLLLLPFFPPSSPPLLSPSSSSPSISPSPPLPPSPSPSPPPLPFPLSFLLSSTSSIPILSLLPIPISSLFLLLIPLFIHLLLSPTSPSPSYPLPFLPPSPSYSLPLLLILLPLPFFTSSLPTLSPPLLLLLLLFPLPFPLPSLFLLPPLPFPPHPHSLLLLIPLFIHLLLSPLPFSFLLPFLPSSSPSYSLSFSPSIRGFNQSINPPPPPPLLFPFPAFPPPPPPPSPSFPSPSSPSPSPYVCLSSSTSPPPPLEPRLEPLVPEIVPDAGEGGTEAVGGKAEEEVAAEESFPEEGRGEETQVQRVDEEDVRYICPICEDVLSSQHLFTVHIRSHNDVRTGASSDASATNSTGVAVSAGGLKAFSCRICGKALSSSSSLDRHMLVHSGERPFKCRLCGVAFTTNGNMHRHMRTHAANSSAGKDPEEVSDCGSSDSGGSKKGKVTPKKSRTSTPATTPSPGSVRKRQANSGSADSIKIQGKGNGSSPRRRVAKEATAASELGWRCLACDISFRNQRALRLHAYMAHRELEPEEEEEDDLEEEDCEEEEEEEERGGGRKRSRRDGGETTSRTMQTPTLGFQDLTFVDFSTQKFPLIARAACEKAVHHASSEFHRFHCGLCGRAFPCGSALHIHADSQHRAASASPAAAAQPTADDPKEDFFAVLNLQNKTRCGPSPPPGQGSLPPPHLRLFPHPNSPSLSHLPYAERKRREEEFDNAFYFNSPAMKPKDLHAKKGTSEEEDSGREASEAPRDLADINSIISAVAGNASGLMRSVEEEEEDELGGGYEEEEEEQEEEDALFAAELREMKTRGEFPCKMCPSVFPNLRALKGHSRSHISDIVDASPGEDDGAHRYLCCLCGRRVASDKHGLMRHLRSHNGERPYRCALCRFAFTTKANCERHLRNRHSKASREEIRRSVIYSPVADESSPGHPNVETEEKGRLEVSCAAQCIVPASSPIPTKLSALLTAISEAKSSLPPSDSFGRDADDKDCDLRMSSRECGHMEDLSSVEALVNFTKSPSLPPPLSMMSGQISLSMQQHLFRPIAVKREPTKDGVAVSSEAPLDLSMDALDLSSKKVQDEPEDLSRPAVEKSRPIIPATVGPIGIGFNGGLLMPVRLPAAPTARLMVPPASSENPQISQVPKIDPAPVSLSNGTSRVDISATNPPSAAPFYSNPLQMYLNSQFPAASARPSAGNFPYLLPLPFPSSSTPLLPQLQTTQVQSPSLRPPPLSSPSIGQPRNVTPSYLHPGIPASPAPPSMERLEKEILRNLHLSSGGSLVLDAASVADRIQAIAMAAAAAAGFPPTAVASEHPPKSSQTKESKPSDPAVASTREVASSKEDPRMQPGVKMVIKNGVLMPKQKQRRYRTERPFACCHCSARFTLRSNMERHIKQQHPEFWSQRPRGGRRGGSTGLTGATSSRTDASPSAADARLSNSPDGPLPPAASLPAESAGKPISEDGCSEDYRDDDLNLEEAENNNMHSLPEDRVSILESSTNHDDPNIKAKDSNKTVISEEVKNAIAQQLKSKLIADCRPVTNPLFGGEEAKRIDAKEEAKKTTKDLKGESNADDEEDSGELVIDEEKMDTENDFRGGKGRNSGCPITKEDESSGVDLASVSKLLDNASTQTFQQYFKSEEDDEMEETDRRGGERRGGDEGYEGGEDGEDEEEEEGWKSGDETGGSKGTSSGEECSSRGGRGEERDDSLERKLASVTVEAATAADTEDKGKRRSAYSSAPNRVSCPYCMRKFPWRSSLRRHILTHTGQKPYKCAHCPLLFTTKSNCDRHLLRKHGRGSGGMGGGCGGSSSGAEDAAPVVASSGGDGVSPGGGATSSAYTMRNVPERPYKCNVCPSSTFSTQNNLKKHLAAKHQNLQPPHHSNSGRSSASPRGISEKGGSASSASSPRCATEERDVDDEEDEEGLVGAEDEEGMLDEEEEEEEFEEDEFAEGSGSEAVCNGETKGPRSQGNSNRKREVTQPKNIERNSEQSNQNRQRLNGSVASSSADEGERGKALRSTPPPHQQNNQVHLHHQHQHHQHHHHHHHPGSDLPFKCHLCERSYAERSDALNHIRDSHASEYELLVAKGALDSAAAVSSEDSHNNNHQGGANNNNNTTGVEHVAGEENLEQLRGKFPDYANRKVSRDFGILVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01504918;
90% Identity
-
80% Identity
-