Ucar069297.1
Basic Information
- Insect
- Uropetala carovei
- Gene Symbol
- Rhobtb1
- Assembly
- GCA_036926305.1
- Location
- JAXCHB010000133.1:6262843-6303528[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5e-06 0.012 18.5 0.0 5 44 1074 1112 1070 1121 0.86 2 3 0.001 2.6 10.9 0.0 50 99 1217 1273 1205 1283 0.76 3 3 6.9e-20 1.8e-16 63.0 0.0 7 108 1309 1413 1304 1415 0.94
Sequence Information
- Coding Sequence
- ATGCGCAGAAGGTTGATCACATCCGTGTcctatctttttctctctctctctagattTGGAACTATCTCTCTCCCGGTGTGGAAGCTGGGACTATGCTTTGGGAAGACGCCGTctagtcctctctctctccccctgcgtCTCTCTACCGCTCTCTTTTTCTctaaaccctctctctctctcgctctctctctctatcactccgGGCGCAGCCGTTGCAAAATCCATATCCCCTGCTTTCTGCTCGCCTCACttgttgctctctctctccttgtcttggtctctctctctctctatctctcgagGGATATAGAGAGGCGTGGCGTTGTCCAGGGCACCCGGACGCGCAAGGGAGAAACGTGGGAACAAAACGATCCACTCCACCACGCGCGCTCCCAGCGAAAAAGTAAAGTGAGGTTGCGTGGCGAGGGGGCGGCCGAATCGACGGCCAAGTCGAGAAGTTTTGCGGGTTTTTCTTTGGATGGAAGAGTAAAAAAGgaagtcgttttttttctgGAGGTGGGTGAATTTTTTTGCCTCGTTTCCATAATAAATGCGTTTGGAGGGCTTTCGGCGTGCCATGCTCTAATGACTATGAGGTGGGAGGGGGTTTGGCGACGTGGCTCTCTTTGTTCTCCCCTCCCGCGGCGGCGGCGCACGGAACTTCGTACAGCCTGTACGAAACCTACCTTGCAAGGTGAAATTCTCTCCTATCGACACGATACGTTCTTCCTTGGAATTGAAAAATCCGGTCCTACTTCGATCCTCCCCTCCGCCATCCTATCCTTTCTCCATTCCCTTCCCCAGCCTTTCTTTTCGCTGTGGACTGTTACGCAGCGTGTggccctctcttcctccctttctttccctccctctctttctctcaccccgCGTGATGGTAGTTCATCACTTGAAGAAACTGACGCTCAGATCATcggccttcctctctctctctctctctctctttggtgTATAAgtatgcccccccccccttcctccctcccctccctctccttctctctctctctctgctccaaTCGCTTACCCCTCCCCAACCCCTTTCAAGCCAATTCCCCATGTCCTCTCCGCGAGGAATGCAGCGTTCGCTCTTTCCCTACCGTCCGACCGCCCTCCATTGAAAGCGAGAGTCGTGACATAAAGGAGCGGGACCAGCCGTTGGAGTGCCACACGTCCACTCTTAGCGGACGTCGTATCTTCTGTCCTGCCTCGAAAGGCTTTGGAGCTTTGATATTTTGTGGAACTTCGTCGACGGGAATCCTTCCGCTGCTCAAAAAGGGGAGGAGACGTTGTTTTAGGACATGGTTCGTTCGGTTTTTTTTAGGGCATTCGGGAATCGTACTTGCGGAGTCATCCCTACTGGAGAGAATTGTTAGGGACATTATGGTACATTTCATCTCCTACCACCCACTAATATGGCGAGTTTCGGGTTCCCACACCCTTTTCTCCCCACTTCGACACCCTCCGATGGTTGGTCGCGGAAAGGGAGAGGGTAGAAAGCGGGGAGGAGAAGTGGGGGAAAGGGGTGACACACTAAGCGCCAATGACAGCTGGAATCCATCCGAAACTCAACCTGAAACAAAAGGAAGAACATCGTTCGACACTTTTCATCTCCAGTCACCTCGCAAATCTCACGTCTTCCTACGCGGcaaacccctccccccccccccccccccccaccccctccccctcttaccTTCCTCTACCACACTTCTTCGTACTTCGTCTGCAAACTTTGCGAGGATTGCAGGAAATACGGAGGGAGAGGATACGAGGGTGGAAGGAGAGGTCAGTGTTGATGGATTTATGCCGGCGGTAGAATGCGGGAGAAGTTTAGAAGGGTGCGAAATTGACGGAAAGGGGAACGGCCTCGCCCGTCCTCTTGGCGTGCGTGGAACACGCGTATGGGGGAGCTCGCGTGCTGCCTTTATTGTGCACCTCGCGCCCACACCTGCGTCGCGGTCACCATCTGCGTGTCGCAGTTATGTAATTCCTATGCCGACGCGGTTTAGTCAACCGCCTCTTGTTTCTCGTCCCACCTATCCCTTCGGATTTGCGTCGTCATTTGGTCGGAGTTGGACAACTCTCTTAAAGGAAAGACGTCGGGCATTGTCCCTCTCACTTCCCGACGGCATTGCCCTACTTCCGCTATTCAATTATCTTCCCCCCTCCTACCTGCTTCCTCatattccctctttctccctctctaaactatttcttcctctctccatctctataGCCTCCTCTCACAGCTGCTCTTCTGCAGGATCAGCTTCGCGAGTCCATCCTGCCTTTCCCCTCctcatttcctctcttctcttcctccccctctcatcgCCGTTTCCGTATTCGTTTGTTTCTGAAGTCCGGCAATGCGTCGAATCTAGCAAGAGACCGAGAATTTCATCGTCCCCTGGAGAATGGCTCTTGATAATGGATAATGAACAACCCCATCAGGAATTGGTGAAATGCGTCGTGGTCGGGGACACGGCCGTGGGCAAGACGCGCCTCATCTGCGCCCGGGCCTGCAACAAACACGTGTCCTTGTCTCAGCTGCTCACCACCCACGTTCCAACCGTCTGGGCCATCGACCAGTACCGCATCTACAAGGACGTATTAGAGAGGTCTTGGGAAGTGGTAGATGGTGTAAATGTCTCTCTTCGTCTTTGGGATACCTTTGGTGATCATGAGAAAGACCGTAGGTTTGCCTATGGCAGGTCGGACGTGGTTCTTTTGTGTTTCTCCATCACCAATCCTGTTTCCCTTCGCAACTGCAAGGTTATGTGGTACCCTGAGATCCGCCGCTTCTGCCCTCAAACACCCGTCCTGCTGGTTGGATGTAAGAACGACCAGCGATACATGTATCGGGATGAGGCTTACCTGAGTTTCTTCAGGGACAAAAGTCCCTTTGTTAGGCCAACAAGAAAGACTGACCTAGTGATGCCTGACCAAGCAAGAGCAATTGCTAAAGAACTGGGAGTATACTACTATGAGACTAGTGTGTTCACATATTATGGCGTCAAcgaagtttttgagaatgccatTCGTGCAGCCCTCATGGCTCGTCGTCAGCAGCGTTTCTGGATGACCAATTTAAAGAAAGTACAGAGGCCTTTGCTCCAGGCTCCCTTCCGTCCACCAAAACCACCACCAGCAGAGGTGTGGGTGGGGGCAAGCacatatgatgaaaatatgGTTGCACTGCATGCTAATCAAGCCCATACTGATGTCATCTTTGTGGCAGGGAGCGTTGGTTTCTCTGCCCATCGTTTCCTCCTCGCTGCTGCCTCTCCTGCACTTCTTCGCCTTCTCCTCACTGACCTTACCATCCCTAGCAGCTCAGGAGGTGACATGGGTGCAAGAAGTTCTAGTGAAACTAGCATGGTAAGCACATTTGGGGAGTCAACCATTGGAGACTTCAATGAAGATACAGAGTACCTCATCCGTGTGGATAACCACAAGCCTACAAGAGTATGGGACCAAATCAAACGCAGGTCCAGCTGTCAAGTATTACCAAGTGATAGCCGACGTGTTGGTGTATCAAGGGAATTAAATCATCCAGCATTTCAGTCAATACGGATAGAGGAGTGTGAAGGGTTGGATCACAAAGGACGTCCTACATCATCAGTCCAAACAGTGATAACCCTCTCAAAGTTGGTCACACCACAAGCCATGCAACAATGCCTTCAATTCCTATACACAGGAACAATCGACAGTCGTTTCTGTGATCTGCAGACTGTGCCTCTTGGACTATTGCTGGAAATCCGCCAAGCTGCTGAATTTCTAGATCTCCCAGAATTGCTAGTGTTTGTCTCAAATATTCAAGCCCATGAGGAATTTATCAATACTGATCTCAAACAGCAGTTCAAGAAGGCTGTGAGAAATAGGCTGCACGACTTGTGTCTAGGACAAGGTCTATTCTCAGATGTAGTATTTCAGCTGGAAGATGGTTCCCTTTTAGCTCATCGTGCCCTGCTAATGGCTAGATGTGACATGATGAGGGCAATGTTCTCTGGTGATTTCAGAGAAAGTTCATCCAAAGTGatTCACTTTCCTGGTGTCAAAGAGGATACCTTTAGGAGATTGTTAACATACTTGTACACAGACGAAGTTCCACCTTTTCCACCTTCATCTACACCTCAGCGCTGTTTGGATCTTCTTGAGCTAGCAAACCGCCTTTGCCTTCCTCGTCTTGTGCATCTTGTTGAGCGAACTATGGTGTCTCAGATGGAAGCTAGAATTGCAGCTTCGAATAGAAATGCTGATGTTGTGGAAGATTGTTTGTGCTTGGTAGAACCATGCAAGCTTCATAATGCAGACCAACTAGCAGATTGGTGCATGAGCTATTTGTGTTCAAATTATAACAAGATCTGTAAGACATCACCAAAATTATTGAAGAGTTTACATCCAGATAATCAGGCATATCTCAGTGAACATCGTTGGCCTCCTGTTTGGTAA
- Protein Sequence
- MRRRLITSVSYLFLSLSRFGTISLPVWKLGLCFGKTPSSPLSLPLRLSTALFFSKPSLSLALSLYHSGRSRCKIHIPCFLLASLVALSLLVLVSLSLYLSRDIERRGVVQGTRTRKGETWEQNDPLHHARSQRKSKVRLRGEGAAESTAKSRSFAGFSLDGRVKKEVVFFLEVGEFFCLVSIINAFGGLSACHALMTMRWEGVWRRGSLCSPLPRRRRTELRTACTKPTLQGEILSYRHDTFFLGIEKSGPTSILPSAILSFLHSLPQPFFSLWTVTQRVALSSSLSFPPSLSLTPRDGSSSLEETDAQIIGLPLSLSLSLWCISMPPPPSSLPSLSFSLSLCSNRLPLPNPFQANSPCPLREECSVRSFPTVRPPSIESESRDIKERDQPLECHTSTLSGRRIFCPASKGFGALIFCGTSSTGILPLLKKGRRRCFRTWFVRFFLGHSGIVLAESSLLERIVRDIMVHFISYHPLIWRVSGSHTLFSPLRHPPMVGRGKGEGRKRGGEVGERGDTLSANDSWNPSETQPETKGRTSFDTFHLQSPRKSHVFLRGKPLPPPPPPHPLPLLPSSTTLLRTSSANFARIAGNTEGEDTRVEGEVSVDGFMPAVECGRSLEGCEIDGKGNGLARPLGVRGTRVWGSSRAAFIVHLAPTPASRSPSACRSYVIPMPTRFSQPPLVSRPTYPFGFASSFGRSWTTLLKERRRALSLSLPDGIALLPLFNYLPPSYLLPHIPSFSLSKLFLPLSISIASSHSCSSAGSASRVHPAFPLLISSLLFLPLSSPFPYSFVSEVRQCVESSKRPRISSSPGEWLLIMDNEQPHQELVKCVVVGDTAVGKTRLICARACNKHVSLSQLLTTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHEKDRRFAYGRSDVVLLCFSITNPVSLRNCKVMWYPEIRRFCPQTPVLLVGCKNDQRYMYRDEAYLSFFRDKSPFVRPTRKTDLVMPDQARAIAKELGVYYYETSVFTYYGVNEVFENAIRAALMARRQQRFWMTNLKKVQRPLLQAPFRPPKPPPAEVWVGASTYDENMVALHANQAHTDVIFVAGSVGFSAHRFLLAAASPALLRLLLTDLTIPSSSGGDMGARSSSETSMVSTFGESTIGDFNEDTEYLIRVDNHKPTRVWDQIKRRSSCQVLPSDSRRVGVSRELNHPAFQSIRIEECEGLDHKGRPTSSVQTVITLSKLVTPQAMQQCLQFLYTGTIDSRFCDLQTVPLGLLLEIRQAAEFLDLPELLVFVSNIQAHEEFINTDLKQQFKKAVRNRLHDLCLGQGLFSDVVFQLEDGSLLAHRALLMARCDMMRAMFSGDFRESSSKVIHFPGVKEDTFRRLLTYLYTDEVPPFPPSSTPQRCLDLLELANRLCLPRLVHLVERTMVSQMEARIAASNRNADVVEDCLCLVEPCKLHNADQLADWCMSYLCSNYNKICKTSPKLLKSLHPDNQAYLSEHRWPPVW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -