Uoli016500.2
Basic Information
- Insect
- Udea olivalis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947369235.1
- Location
- OX376345.1:2808639-2826061[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.2e-62 1.3e-57 196.2 9.3 1 222 121 334 121 337 0.91 2 3 2e-13 3.1e-09 37.3 5.8 202 267 416 481 410 505 0.76 3 3 2 3.1e+04 -8.0 15.1 1 48 502 548 500 575 0.62
Sequence Information
- Coding Sequence
- ATGGGCAATCAGACTAAAATGGCTCCTCCTAACAATACTGATGAAGAAAGCGGTGACGCCTTCACCGATGGCGATTTCGATGACAGCGGTGACGAAACAGTATTTGAAAGAAATGAAGGGGCTCGGAGGTCGTATGTGCCTGTCAACGAAACTCTAAACAGAGATGTGCATAGAACTATGGATGCGATCACTTCAAAGCCTCCCGCTAATGGTTTATCTAAATTTAATGGACTTAAAAACGGTGAAACCAGTGGTGTAGATTACCGCAGCAATGGTGATGCTGGAAGTGAAATACGAAGGGACTCTCATGGTGACCAGAATCCGTCAATAGTAGGAATAATCGGCAATCAACACAATCATGCGGAACAGCGCCTAGCAGCGCGGCGGGCCGCCCGTGCGGAGGCGCGCGACATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGGGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACGCAGACACGGTGGGGCGGCGCGCCGGCTCGCGCCTGACGGGGCTGAGCCCGGCCGCGCTGCACTCGCCGCGGCGCAGCTCCGAGGATTCCGCTGACGATGTCTTCAACATTAAGGATCTCAGGCATGAGCTGAAGGAAGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCACGGCTACCAGCTGGAGCTGCTGAAGGACCGGATAGAGGAGCTGCAGGAGGAGTACGCGCAGCTGTCGCGTGAACACAGAGAGAAATGCTCAGCCTTCGAGCGCCTCCGCCGCGAGCACACGTCCCTAGAGCGCGAAGTGACGATGGCGCGCGACGCGGTGCGGGCGCGCGACGCGGCGGCCGACGCGGCGGGCTACGCCTTCGTGGACGCGCCGCCCGCGGCCAGCGTGCCGGGCTTCGGCGACGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCGGACCGGCTGCTGGGGGACGCTAGTGAGGGGACGCTCGGTGAGTCACGGTCCGGGCGCGCGACGCGGCGGGACGCCTTCGTGGACGCGCCGCCCGCGGCCAGCGTGCCGGGCTTCGGCGACGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCGGACCGGCTGCTGGGGGACGCTAGTGAGGGGACGCTCGGTGAGTCACGGTCCGGGCGCGCGACGCGGCGGGACGCCTTCGTGGACGCGCCGCCCGCGGCCAGCGTGCCGGGCTTCGGCGACGTGCCGCCGCTGGCGCTCGTGTCGCACCAGGCGGACCGGCTGCTGGGGGACGCTAGTGAGGGGACGCTCGACGTCCGGTTGCAGAAGCTGATCAGCTCGAAGCAGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGACGAGCGCGCGGCGCGGCAGAACGGCCAAGCCAAGCACCACGACCAGGAGCTGGAGACTGAGTTGGAAGGTCTCCGACGCTGCGTGTCGGAGGCGCGAGCGAGGGCCGCGCGTGCGGAGGCCGAGGCGGCGCTGCAGGGCGCGGCGGTGGCGCGGCTGGAGGCGCAGGTGGCGCGGCTGAGGGCGCGGCAGGACCATCAGGATGAGCACGAGGAGGCGCTGAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGCGCGGGAAGCCATCAACCGAGTAGAAGAGCTGGAAACAGAGAACAGCCACTTAACGAAACGGCTGGACAAACTGAAGAACGCCAAGTCCCAGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MGNQTKMAPPNNTDEESGDAFTDGDFDDSGDETVFERNEGARRSYVPVNETLNRDVHRTMDAITSKPPANGLSKFNGLKNGETSGVDYRSNGDAGSEIRRDSHGDQNPSIVGIIGNQHNHAEQRLAARRAARAEARDIRMRELERQQREQEDHADKAYDMYADTVGRRAGSRLTGLSPAALHSPRRSSEDSADDVFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAAHGYQLELLKDRIEELQEEYAQLSREHREKCSAFERLRREHTSLEREVTMARDAVRARDAAADAAGYAFVDAPPAASVPGFGDVPPLALVSHQADRLLGDASEGTLGESRSGRATRRDAFVDAPPAASVPGFGDVPPLALVSHQADRLLGDASEGTLGESRSGRATRRDAFVDAPPAASVPGFGDVPPLALVSHQADRLLGDASEGTLDVRLQKLISSKQALESEVRKLKLQLNDERAARQNGQAKHHDQELETELEGLRRCVSEARARAARAEAEAALQGAAVARLEAQVARLRARQDHQDEHEEALKQERRKLQREAREAINRVEELETENSHLTKRLDKLKNAKSQLLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -