Basic Information

Insect: Udea olivalis
Gene Symbol: clz9
Assembly: GCA_947369235.1
Location: OX376355.1:15382385-15384283[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.8e-08 2e-05 24.9 0.0 2 40 15 54 14 59 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.8e-08	2e-05	24.9	0.0	2	40	15	54	14	59	0.85

Sequence Information

Coding Sequence: ATGGAGGAACAAAAGGATAGTAAAAAAAATAGAAAATACAATGAAGCGACGCTGAGAACCGCAGTCGAAAATGTATTAGACAAAAATATGACTGTATACCGCGCATCTAAAGAATTCGGTATTCCATGGACTACTCTCAACGATAATGTTCGTCGTGCGAAAGAAGAAAGAGACAACGGAATCGAAACTCAATTTATTATGTCTAAAATTGGAAGACCGTTTTCACTACCGGTTGAATTAGAGCAAAAATTAGTTGCCTATATAATTGAAATGCAGGAGCTCGGGTTTGGCCTCACAGTAAATCAAATTCGAAAAATTGCCTTTTCGTTGGCAGAGGCAAAAAATCCTAAACATTGCTTTAGCTCAGACAAAGGTTTTGCAGGTTGGAACTGGTGGGTCGGTTTCAAACAGCGTTATGGCCTATCTTTGCGAACACCGGAGAATTTTTCTGCTGCCCGCGCTAGTTGTTCCAATCCTGCTATCCTTGCTGACTTTTATGAAAAGTTAGAGAAGATCCTGATTGAGCACGATTTGTTACAATCCACGGATAAAATATGGAATTGCGACGAGACAGGCTTAATGTTCGTTAACAAACCTTCTAAAATAGTGACAAGTATTGGAAAACAATATGTGTACAACCGTACATACGCTGAAAAAGGTACCACAACTACAGTACTAGCTGCCATCAATGCTTCTGGATGTTTTCTTCCACCGATGACGATTTTCAAAGGGGTACGAAATATACCACAGCTAAGTTCTGGTTCTCTTCCAAATAGCCTGACACGACTTTCTCCAAAAGGTTGGATCAATGCGGATCTGTTTTTGGAATGGCTGGAGTTTTTCTCCACAAAGATTCCTCCAGCAAGGCCGGTTTTGCTCATAATGGATTCACATGCCAGCCACGTTTCGCCAAATGTTTTAGCTTATGCTCAGTCTAACAAGATCATATTATTCACAATGCCTGCACATACAAGTCACATCTTGCAGCCACTTGACGTCGGGGTCTTTCGGCCGCTTAAAGCAGCTTGGCGTGCTGAATTACAAAAGTACATAACGCAACATCCAAGTTCAGTGCCGACAAGTTTTGACTTTCATAATTTTTTTACTCCAGCATATGAAAGAAGTTTTACTCCACCAAACATAAGAGCAGGATTTGAAAAGACAGGTATCTATCCATTAAACAAAACTGCAGTGTGTCCAGAAGCAATTGCGCCCAGCCGACTTACAGACAAACCCCTTCCCACAGAGCCAATACAAAACATTCTGATCGAAGAAGACTTTGAAGATTTGATCCCTAACACCGAAATTGAAACAACTAACAGCGACCCCCTCAATGATTCGACATTACAAGAACCAGAACAAGAATTTACCACCATATGCAAAACAGGCGCATGCGTAACGGAGGCAGACTCAAATATAGCAAATTCTTCCCCTCCTAAACCAAAGAAAATTGAAGTTCACGATATTCTGGTCCTACCTAAATGGACACCTAAAGCGAAGAAGCAGAGTTCTAAAAGGACTGTTCCTAAAGCTATATGTTTAACACCCGTTCATCCGTCAACTTCGAAACTGCAAACTAACCACACACCACAACTGCCAAAGCAAAAGCCTACAAGGAAAATGTCTGTGTCTGCAACAGTTAAGGGAAAATCAAAAACAACTACTCAAAAGAAGCGAAAACTGTCACAACTACAAGACGATTGGGCATGTCACACGTGTGATGGACTGTACTCCAACGATGTGTCGTTAAAAAACGGAGCTGAATGGATAACTTGTTCTTTTTGCACGTTACCTTATCATGTTCATTGCCAAAGTCAAGATATACCAAAAGGAAGTCAACAACAATTTTTCATGTGTGACGCTTGCAGTGTGAATGATAGTGATGATGCTGATCAATAG
Protein Sequence: MEEQKDSKKNRKYNEATLRTAVENVLDKNMTVYRASKEFGIPWTTLNDNVRRAKEERDNGIETQFIMSKIGRPFSLPVELEQKLVAYIIEMQELGFGLTVNQIRKIAFSLAEAKNPKHCFSSDKGFAGWNWWVGFKQRYGLSLRTPENFSAARASCSNPAILADFYEKLEKILIEHDLLQSTDKIWNCDETGLMFVNKPSKIVTSIGKQYVYNRTYAEKGTTTTVLAAINASGCFLPPMTIFKGVRNIPQLSSGSLPNSLTRLSPKGWINADLFLEWLEFFSTKIPPARPVLLIMDSHASHVSPNVLAYAQSNKIILFTMPAHTSHILQPLDVGVFRPLKAAWRAELQKYITQHPSSVPTSFDFHNFFTPAYERSFTPPNIRAGFEKTGIYPLNKTAVCPEAIAPSRLTDKPLPTEPIQNILIEEDFEDLIPNTEIETTNSDPLNDSTLQEPEQEFTTICKTGACVTEADSNIANSSPPKPKKIEVHDILVLPKWTPKAKKQSSKRTVPKAICLTPVHPSTSKLQTNHTPQLPKQKPTRKMSVSATVKGKSKTTTQKKRKLSQLQDDWACHTCDGLYSNDVSLKNGAEWITCSFCTLPYHVHCQSQDIPKGSQQQFFMCDACSVNDSDDADQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121379;
90% Identity: iTF_01503804;
80% Identity: -