Basic Information

Insect: Udea ferrugalis
Gene Symbol: -
Assembly: GCA_950022985.1
Location: OX465527.1:3542115-3555439[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.2 2.1e+02 3.5 0.3 1 23 90 113 90 113 0.93

2 18 7 6.6e+02 2.0 0.2 3 23 118 138 116 138 0.94

3 18 4.6 4.3e+02 2.5 0.0 2 23 142 164 141 164 0.88

4 18 0.6 57 5.3 0.2 2 23 391 413 390 413 0.95

5 18 0.0044 0.41 12.0 1.0 3 23 453 473 452 473 0.97

6 18 2.1 2e+02 3.6 1.1 1 23 489 512 489 512 0.84

7 18 0.53 51 5.5 4.3 1 23 521 544 521 545 0.93

8 18 3.5 3.4e+02 2.9 0.6 1 23 556 579 556 579 0.92

9 18 0.017 1.6 10.2 0.4 2 23 624 646 623 646 0.88

10 18 3.9e-05 0.0037 18.5 1.8 1 23 680 702 680 702 0.97

11 18 8.6e-06 0.00082 20.6 1.5 1 23 709 731 709 731 0.98

12 18 9.2e-05 0.0088 17.3 2.3 1 23 736 758 736 758 0.96

13 18 0.0095 0.9 11.0 0.9 1 23 764 786 764 786 0.97

14 18 3.3e-05 0.0031 18.7 1.1 1 23 792 814 792 814 0.94

15 18 0.00046 0.043 15.1 2.4 2 23 821 842 821 842 0.98

16 18 0.00027 0.026 15.8 0.7 2 23 851 873 850 873 0.97

17 18 0.00093 0.088 14.2 0.2 1 23 878 900 878 900 0.97

18 18 2.3e-05 0.0022 19.2 1.5 1 23 906 929 906 929 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.2	2.1e+02	3.5	0.3	1	23	90	113	90	113	0.93
2	18	7	6.6e+02	2.0	0.2	3	23	118	138	116	138	0.94
3	18	4.6	4.3e+02	2.5	0.0	2	23	142	164	141	164	0.88
4	18	0.6	57	5.3	0.2	2	23	391	413	390	413	0.95
5	18	0.0044	0.41	12.0	1.0	3	23	453	473	452	473	0.97
6	18	2.1	2e+02	3.6	1.1	1	23	489	512	489	512	0.84
7	18	0.53	51	5.5	4.3	1	23	521	544	521	545	0.93
8	18	3.5	3.4e+02	2.9	0.6	1	23	556	579	556	579	0.92
9	18	0.017	1.6	10.2	0.4	2	23	624	646	623	646	0.88
10	18	3.9e-05	0.0037	18.5	1.8	1	23	680	702	680	702	0.97
11	18	8.6e-06	0.00082	20.6	1.5	1	23	709	731	709	731	0.98
12	18	9.2e-05	0.0088	17.3	2.3	1	23	736	758	736	758	0.96
13	18	0.0095	0.9	11.0	0.9	1	23	764	786	764	786	0.97
14	18	3.3e-05	0.0031	18.7	1.1	1	23	792	814	792	814	0.94
15	18	0.00046	0.043	15.1	2.4	2	23	821	842	821	842	0.98
16	18	0.00027	0.026	15.8	0.7	2	23	851	873	850	873	0.97
17	18	0.00093	0.088	14.2	0.2	1	23	878	900	878	900	0.97
18	18	2.3e-05	0.0022	19.2	1.5	1	23	906	929	906	929	0.98

Sequence Information

Coding Sequence: ATGTCTTCAGAAGATTCCGACGATGAGCCTCTATCAGTTTTAGCGGCCGCTAAAAAGCTAAATCCTGAAAAATTCGAGATTTTCAATAGTACAGATATCGAGTTTGTGCCGTCCCGAAAGAGGAAGAAAaagaagattatttatttagagcCTGATAATCTAGCTCTTACTATTAAGTTGTGTAAGACTAGAGGTAGTGTTGTGAAGGTGGTGGAAAGACCAACAGACGTATGGCTGTACATGAAGGACCTAAACCCAACTGGACCGTATAGTTGCCTGTTGTGCTCATATTGGTTCATAAATAGGGGTAAACTTGTATTACATTACATCCTGAACCACAAGAAAGATTTTTGTGGAATATGCAGATATTTTGTGCCAGAAAGAGAAGATTGGATCAACCACACAAAATTCCACAATCCTTGGCCTTGCTCACAGTGTCCTGAGACTTATCTTACAGAGCCAGAAATTAGGAAACACTTGAGTGAAGTTCACAACTTAGTTCATTGCCGGCTCTGCCACTTTCGAACAACAGATGATGAACATTACAATAGCCATCTTTTTCAGAAGCATAATGTCACAAATGTTGCAAGTAGAACTAATGATATGTTGTGGGAGATTGATGAAGAAGGCAATTTTCTTTGCATTCTATGCTCAAAACCTAACAATTTACCCACAACATTCTTCGGTCATTACATGGGCTATCATCACTTCACACTTAAGTGTCTGACCAGCATTATTTCTGGCACAGAACAACCATTTTCTGTTGAAGGAGCTAATGTCAGCACAGATTTCATTGAAGGCCAGTTGAAGCAGCAGGCGAGGATTGGCTATGTTGATATTGACAAAAAACCAGGTGAAGGTTTGGATACCGAAGACCAAATAGACCCTAATACAGTTTTAGATCTCGTGCCAGAGATCAAGCAAGAAGTAACCAGTGACAATGAGAATAATGATGCtccaaaaactactaaagctaagAAGGCAATGGCTGACTTGACCAGTTATAAGGGAGAAGACGACTTTGATATTACCTTAGTTGAATTTGTTGTTTTACAGAAATGGTACTTTGATTACGTTAACAGAACACTCAATTACATCAACTCCAATACAATTTCTGATGAGTCAGGTGTTGATTACAAGAGCCTAATGCTTGATACTACAATAAGTATTGAGTGTTCTCTATGCAAGACAAAAGTTAACTCTGTTCTGACCCTTGCTACTCATATGTCAAGGATCCATTCGGTCAAGTCCGTCCCAATTTACACATGTAGAGTATGTTCAAATGTGTATGATTCTTATAATGAGTTTGACGGTCACGTCATAGAGGAACTGCGTGACTTTGATGACTTGTGGTTGTGCCAGTTTTGTGACAAAGAGTTTGACAACAGAGAGGAGACTAGAAGGCATTTGAATGAGCATTGGAACTTGATTGAGTATGACAACTGCTTCAGCCCCCACCTGGGGTTTAAGTGTAAATACTGTCAGACACTGTTCTGGAATGAAACTGATAGAGAAACTCATCAAGTCAGAGTGCATTATATGAAGCACAAAGAAGATTTTTACAAATGCCAGAGCTGTTCTGAAATGTTCAGTGAGAAGATGTGGTTTGTCCACCACTACTTAGATCGCCATCACACTACCGGTACAGATGAGACCATGTACCTCTTCAAGTGCTACGTCTGCAGTCTTGTCTTGCACACCATTGAGGAGATGAGGGCTCACTTCAAGGCAGAGCACCCTGAAGCAACTAAGATATACTGCACCCTAGGTGCTTGTTTGTATAGACCACTCAGCCAGAGGAAGTCATTTAAGTTACATGTGAAGAGTATGCACTCGGACGACGGCCTCAACTCGACTGAAGGCTCGTCCAGTTGCCCGATGTGTGGTCGCGAGTTTACTACACCGCGCGCGTGCGGCGCGCACATGTCGCAGGCGCACGGCGCGGGCAAGTTCAAGTGCAAGCTGTGTATAGAGGTCATGCACACTATGGACGAGAGGAAACTGCACTACCTGATCCGTCACCCGGGCCGGCACCCGTTCGAATGCAGCGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAACAAGAACACGCGCCTAACAAGCAGCCCTTCACTTGCAGCTATTGCGGGAAGGTGTTTATGAAAAAAGACTCGTACCGCGAGCACCTTCAAATCCACGAAGGTCCTCGCCACGCGTGTTCCTACTGCCCAATGCGTTTTGTGCAGCGCTCCAACATGCTGCGGCACGAGCGCCGCCACACGGGCGAGCGGCCCTACGCGTGCGCTCAGTGCCCGCGCACCTTCGCCGACAAGGGCGCTTGCACCTCGCACTCCAGaacacactcaAAGGATAGATCCTACGCCTGCATATACTGTGGACAGACATTCGTCCAAAAGTCTAAGCTCACTTACCACATCAGGAAGCACACAGGAGAAAATCTAGAGACGTGTTCAGTGTGCGCGAAGCTGTTCACGAGCGCGTGTTCGCTTCGCGAGCACATGCGCACGCACGAGCGCGCTCAGGGCGAGCCCGTACAGTGTCCTCTTTGCGATCGCAAATATCAAAACAGTCGCTACATGGTGCGGCACCTCCGCACTCTACACAACCAGGAGCGTTTCTCCTGCCCCCTCTGTCCGAAGTCTCTGACGAGTGTGGCCGGTCTGCGGCATCATGTGGTCACTCATGGGCGAGCTAACATGTACAAGTGCCAAGTGTGTCCAAAGTCGTACGCCGTCAGACGAACCCTTATGAAGCACCTGCGCAAGCGACACGGCGTCAAGAACACCGATCTCAACATCAAAGAATATTTCCAACGCTTAGACCCTCGCGAATGCAACCTCCCCCTCGACGACGAAGCCATGACCAAGATCTTCGGAGAGCCCAAAACCAAAGCCACCGATGTACTCTTAGGAAACTTTGTTACCTTCACTAAAACGTTCAAGATGGCTGAGAATGTTGTTCATGAGCAAGACCCGGATAGTGAtgaggaagaagaagaagaggagAAAGATAGCGGAGAGGAGAGTGAAGAGGGAAGCAAAGCGGAGGATCAAGAGGAAGACCAGGAAGAGGAGAATGTAGAATTGGAGCCGACAGACTTCGTTAGCGTTAAGATTGAGCAAATAGATGAAGAGGAAGAGGATGTAGTTGATTAA
Protein Sequence: MSSEDSDDEPLSVLAAAKKLNPEKFEIFNSTDIEFVPSRKRKKKKIIYLEPDNLALTIKLCKTRGSVVKVVERPTDVWLYMKDLNPTGPYSCLLCSYWFINRGKLVLHYILNHKKDFCGICRYFVPEREDWINHTKFHNPWPCSQCPETYLTEPEIRKHLSEVHNLVHCRLCHFRTTDDEHYNSHLFQKHNVTNVASRTNDMLWEIDEEGNFLCILCSKPNNLPTTFFGHYMGYHHFTLKCLTSIISGTEQPFSVEGANVSTDFIEGQLKQQARIGYVDIDKKPGEGLDTEDQIDPNTVLDLVPEIKQEVTSDNENNDAPKTTKAKKAMADLTSYKGEDDFDITLVEFVVLQKWYFDYVNRTLNYINSNTISDESGVDYKSLMLDTTISIECSLCKTKVNSVLTLATHMSRIHSVKSVPIYTCRVCSNVYDSYNEFDGHVIEELRDFDDLWLCQFCDKEFDNREETRRHLNEHWNLIEYDNCFSPHLGFKCKYCQTLFWNETDRETHQVRVHYMKHKEDFYKCQSCSEMFSEKMWFVHHYLDRHHTTGTDETMYLFKCYVCSLVLHTIEEMRAHFKAEHPEATKIYCTLGACLYRPLSQRKSFKLHVKSMHSDDGLNSTEGSSSCPMCGREFTTPRACGAHMSQAHGAGKFKCKLCIEVMHTMDERKLHYLIRHPGRHPFECSECGKSFQYKSSLYMHKQEHAPNKQPFTCSYCGKVFMKKDSYREHLQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACAQCPRTFADKGACTSHSRTHSKDRSYACIYCGQTFVQKSKLTYHIRKHTGENLETCSVCAKLFTSACSLREHMRTHERAQGEPVQCPLCDRKYQNSRYMVRHLRTLHNQERFSCPLCPKSLTSVAGLRHHVVTHGRANMYKCQVCPKSYAVRRTLMKHLRKRHGVKNTDLNIKEYFQRLDPRECNLPLDDEAMTKIFGEPKTKATDVLLGNFVTFTKTFKMAENVVHEQDPDSDEEEEEEEKDSGEESEEGSKAEDQEEDQEEENVELEPTDFVSVKIEQIDEEEEDVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01504136;
90% Identity: -
80% Identity: -