Ufer014231.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Udea ferrugalis
Gene Symbol
Armc5
Assembly
GCA_950022985.1
Location
OX465527.1:6056258-6067885[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8 1.1e+03 0.6 0.0 58 76 331 349 326 373 0.84
2 2 7.4e-11 2.9e-08 34.7 0.5 13 107 928 1032 924 1035 0.91

Sequence Information

Coding Sequence
ATGGACAAAAGCTATGTTAAATCTGCATTAGAAGGATTGAAATCAGCTTCTTCAATACGTGTCCAGGAAACTCTTCTTAAAATTAGGAGTAAAATAACGACTAATGATGACGGTATCAAACTATTTCGAGAGTGTGGTGGTTTGGATTGTTTACTGCCCCATTTACGCAAGCCTAATGAAAGGATTCTTGATATTACGCTAAGTATACTTGGCAATTGTTGCTTGGAAGAAGAAAGTAGTCTAGCGGTTGGAAAATTGAATAGTTTTGGCCCGCTAGTGTCAATTTTGAAGACAGTCTCTCGGGATAGCATAGTAGGCCGAGCTTGCCGGGTCATAGGAAATCTAGCGCAAAGAAGTTGTAATGCAGAGGGTTTGCACAACCATGGAGCGGTAACAGCACTAGTTACTCTTATTGAAAACAGAGATAAAAATACATCTTATGCTACATTGAGCATGGCAGTTAGAGCTATAAGACAATTGTGGTCAGTAGTGGATAGTAGAGAAGAGATGCTTGCTCAAAATGCTGTGAGGAGTATTGCTATTCTGCTCACCACAGAATGTGAGTCTGCTGGCATAATCAAATCTGCTAATAATGCTTCAAGGGAGGGAGAAATACTGAGGAAGAGCCAAGAGGAGTTAATAACaggaattttaaaatgtttaggtCACTTCACCACTCATGCTTCTATGAAATGTGCAGAGCAGATACAAGGTGATGGTAGAGGCTACCAATGCTTAGTGGCCCTGACAAAGTTATATGAATCTGTGGCTTTAAAGTGTCTCATGAATCTCTGTTACCTATCCTCATGCAGACCTCTCTTAGGTACAGCTGGCTTTGTTGAATGTCTTGTTGGGATTCTACAGAAGAATTCAGATGTGTCCTGGTGGCCGGAGGGCGCGTTTCGGGCATTGGCGCACCTGAGTGGCGAGTCGGTGAACAGGTCCAAGCTGCGTCACTGTGGCGGCCTGCCTTTGCTGCTGGCGGCGGCGCGCGTCAGCCCCCAAGCTATGCACGCCttgttacaatatgtttttGACGATAGTGCATTTCAAATACTGGTCAGTGAAGGCCTTATAAGCCTTCTAACTGAAGAACTCACAAAATACTTAACAACTATGAACTATGAACATAATAACTTGGAACATACAGATATGCTGAGTGAAGCAGTAGATATGcttaaaatgaaagaaaaaatatttaataacactGGAGCAGACCAAACAGCTCAACCATCCACTACTTCCATTAACAGTACGAGTACTGCAGTTCCATGCGGTGACGAACCCAAAGGCAACCTTTTCTCGCGACGCAAAACACAACTCTTGTCAAAGAATGAAGATGAATTGAAAGTAGTTATAGAAAGAGATAACATGATTGTTGGTTTTGTTGATGCTATTGATAGTGATGCTTCTGATGACAGCGCTAGTGAGGATGATAGTGCACTGCCTAGACGTAAGTTCCTAAAAAGAGCTAGGTCATGCAGTCCCAAAGTTCCCAAGAAAAAATCCCAACTTATAAAGATGGCCAGCAGGGATTGGTCAGCTGGTGTCTATTGGGAACCTAAAAGTCCTGAATGGCCTACAAATCTTCAGTCGCCTAGTTCATCACGCGGCCCGATGAGTCCAGACAGAGATAGGGACCAGGGTCCCCTGTCTCCTTATTCTGATGGAAACCAGTCTGGATTTAGTCCAGAGTATACAAGTAGTTTTGCAAGTAAAAGAGCTAGATGGGATTGGAGTCCGGAATCAGGAATGAGCAGTGGTGATGCTAGTCCTATGTGGAATAATTACCAATGGAGTCCTGGTAGCTCTGGAAGTCCTAAATCGCCATTTAGCACTAATGAAGATAGTTCGGATTCAGAGATATCTGGGCGTTACTCCCCCGTGTGTAGTGACACGGAAGGCGACTCTGTAGAGATGGCGGTGCCGGTGAGTGCCACCGCGGAGTTCGACGCCGTGCAGGTCGCGCAGGACCTGGACGAGCTCATCATGGACGACGACGAGAGTGTGGATGGGGACGCGCCATTGGAAGGTGCAGACGTAACTAAACTAGAGAACACAAGTACGTCTCGCATAGCGTGTGTCCTGGTGCTGATGTACCGCGTGTCGCACGGCGCGTGTGggcggggcgcggggggcggggcCCGGGGAGTGGGGAGCGGGAAGGGGGAGGGGGAGGTGCCCGACCACACGCTGGAGCTGCTGACGGGGCGCGAGTGCCTCAACGCGCTGCTGGACTACGTAGAGCGATGTAAACGCCCGCTTGGACGCGCCGCGCGTATTCTGGCTAGAGTCTTGAGCAATGCTTTGtgtttgatgagtatattgagaCACAGGCTAGTACTTCGACTGCATAAAATGTCTGTCAGCTCAAAACATCCACCTAGTAAATGTCAACAGTGTAaacaaCTGGTCAGACTTagcgccaagttattagcccaACTAACTATACTGGCGGAATCTAGCTACGGGATTGGCGAAATTAGTTACCAACTGCTAAAAGGCCCTTCTTCTATGAAACAAACATTATCATTAACTTTGCCTTACATAGTCAGGACAGAAAAACCCCTGAAGAAGTACTTCATTGATTGCTGTGcacttaattttctttttactaTTGTAGCCGATTCGAAGGAAGATATGCAAGATTGTGTTACCGCTTTAGTCAAACTTGCTACAAATGTCAATATAAAGGATCcaaaaattttagaaaatagaTTTAAAGATCATGTTTGTATTGGTTATGATCCTATATTAGATAATCTTACAGCAGATGATATAGTTACCTTCCAATTAGATGATTCATCTACTGTAGAAGCTAATAAGGTATTTTTGTGTCAGAATTCCGAATATTTCAGTGCTATGTTGATGGGATGTTTCAAAGAATCCATAGAAAAATGTGTGCGTCTGACTGATGTGTCTAAACCAGCGTTGGAATATTTGCTAACTCTTTTGCACTGTGGAATAAATAATCCAAAATGTGAAATGCAGGTCTTCCCAATGGCTGATGACTTAGAAACTAACTTAGAAGTCCTTTTACTAGCtgatagatatttatttaacaaattgaaaGAATTACTGAGTAGTGCCATTTTACAATTCAAAATGACGCCAGAAACGGctgataaaatatacatttggtCTATGAGTAAGGGAATGGGCTTCCTATGTGTAGAATCTGTGGCCTATTTATTGACGGGGAAAATGTGCGAGTCCATGCGCACGCGGTCTTTTAGGAGAATTTTAAGTTTAGAATACAAAGACCAGTGGCTAGACGATATCAAATCTATGATAAGAAGGCAGTTGCTGAAATGA
Protein Sequence
MDKSYVKSALEGLKSASSIRVQETLLKIRSKITTNDDGIKLFRECGGLDCLLPHLRKPNERILDITLSILGNCCLEEESSLAVGKLNSFGPLVSILKTVSRDSIVGRACRVIGNLAQRSCNAEGLHNHGAVTALVTLIENRDKNTSYATLSMAVRAIRQLWSVVDSREEMLAQNAVRSIAILLTTECESAGIIKSANNASREGEILRKSQEELITGILKCLGHFTTHASMKCAEQIQGDGRGYQCLVALTKLYESVALKCLMNLCYLSSCRPLLGTAGFVECLVGILQKNSDVSWWPEGAFRALAHLSGESVNRSKLRHCGGLPLLLAAARVSPQAMHALLQYVFDDSAFQILVSEGLISLLTEELTKYLTTMNYEHNNLEHTDMLSEAVDMLKMKEKIFNNTGADQTAQPSTTSINSTSTAVPCGDEPKGNLFSRRKTQLLSKNEDELKVVIERDNMIVGFVDAIDSDASDDSASEDDSALPRRKFLKRARSCSPKVPKKKSQLIKMASRDWSAGVYWEPKSPEWPTNLQSPSSSRGPMSPDRDRDQGPLSPYSDGNQSGFSPEYTSSFASKRARWDWSPESGMSSGDASPMWNNYQWSPGSSGSPKSPFSTNEDSSDSEISGRYSPVCSDTEGDSVEMAVPVSATAEFDAVQVAQDLDELIMDDDESVDGDAPLEGADVTKLENTSTSRIACVLVLMYRVSHGACGRGAGGGARGVGSGKGEGEVPDHTLELLTGRECLNALLDYVERCKRPLGRAARILARVLSNALCLMSILRHRLVLRLHKMSVSSKHPPSKCQQCKQLVRLSAKLLAQLTILAESSYGIGEISYQLLKGPSSMKQTLSLTLPYIVRTEKPLKKYFIDCCALNFLFTIVADSKEDMQDCVTALVKLATNVNIKDPKILENRFKDHVCIGYDPILDNLTADDIVTFQLDDSSTVEANKVFLCQNSEYFSAMLMGCFKESIEKCVRLTDVSKPALEYLLTLLHCGINNPKCEMQVFPMADDLETNLEVLLLADRYLFNKLKELLSSAILQFKMTPETADKIYIWSMSKGMGFLCVESVAYLLTGKMCESMRTRSFRRILSLEYKDQWLDDIKSMIRRQLLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01504059; iTF_00076748; iTF_00074722; iTF_01279460; iTF_01281509; iTF_00752239; iTF_00075731; iTF_01280563; iTF_00961117; iTF_01071789; iTF_01124765; iTF_01125642; iTF_00347615;
90% Identity
-
80% Identity
-