Basic Information

Insect: Udea ferrugalis
Gene Symbol: -
Assembly: GCA_950022985.1
Location: OX465543.1:4769337-4792289[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 7e-05 0.39 11.2 0.0 3 38 654 690 652 693 0.83

2 6 0.001 5.7 7.5 0.0 4 38 699 734 696 747 0.84

3 6 0.018 1e+02 3.5 0.0 13 38 768 794 766 797 0.82

4 6 0.001 5.5 7.5 0.0 4 38 803 838 800 852 0.84

5 6 0.018 1e+02 3.5 0.0 13 38 880 906 878 909 0.82

6 6 2.2e-09 1.2e-05 25.6 0.0 4 75 915 989 912 991 0.85

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	7e-05	0.39	11.2	3	38	654	690	652	693	0.83
2	6	0.001	5.7	7.5	4	38	699	734	696	747	0.84
3	6	0.018	1e+02	3.5	13	38	768	794	766	797	0.82
4	6	0.001	5.5	7.5	4	38	803	838	800	852	0.84
5	6	0.018	1e+02	3.5	13	38	880	906	878	909	0.82
6	6	2.2e-09	1.2e-05	25.6	4	75	915	989	912	991	0.85

Sequence Information

Coding Sequence: ATGAGAGTGGAATACATGGTGGTTGCATACTGGGGGCAAGAGAGCGCGGGCCGAGGGAGTGCAGCGGCGCAGGCCCAGGCGCAAGCGCAGGCGGCGCTGTTCGGCTTCGGCGGCCGCTACCCGCCCCCCACCACCCTGGGCGTCGCCGCCAACCAGGCCGCCTCGCTCTCGCTACACCCAGCCGCAAGTGCAGCATGGTGGTCCATGGCCTCACACCTAGCAGCGCAGGACTACCTCGCGCGGCTGCAGGCTTCAGGGCTCAACTTCCCTCCAATGGCTGACCCTTACTCAGCTCTGTCAGCCCTGTCAGCCGCTGGCCTCAAGCAGCCAGTTAAGCAGCCGAAACAACCTCCTAGGAATGAAAGGTCCGGCCGAAGTAGTACCTCATCCAGTGCATCCACCAAGGAGAAGAGTCCCTCCACCAACACCAATTCGCAGCCAAGCATGAGTGAGTGGGGAACAAGCTACGGTTTCCCGAAGACGTCTTCTCCGTCCACGATGCACTCCCACTCCCAGTCCCTGTCGAGCCTGGCCTCTCTCAACAGCCTGGTGTCAGCTCCCCATCAGAGCAAGTCTAGCAGCAAGCAGCAGTCGCAACCTTCGCATTCTGTCCCGATGCACTCTCAGTCCTTGTCGACCCTGGCCTCCCTCAACAGCCTGGTGTCGGCTCCTCATCAGAGCAAGTCTAGCAGTAAGCAGCAGTCGCAACCTTCGCGTTCTGGCCGGAAGCCCTCCTCATCATCAGGCAAAGGCAAGGACCGCGACCTGGCGCTGCTCCGCGGGGACCTGATGTTGGCGCAGGCGGCAGCGCACGGCGCCTACCACGCCGCAGTTGCCGCGGCCGCTAAGGGGAAGAATATGTCATCTCTGTACCCATTCGGCATGCCAGGCTCTGAGAAAGACAGACATGGAGGCATCGACTCGCTAACGGGCTTGCCTCATACTATACtcagTGCCGCTTTGGAAGGAGGtGATCCATCATCAGTGCTAGGTGGGGTGAGACTGCCACCTGACACTGAAATCATCAAATATACCTCCTCATTGGCGGGGCCTAAGGCTCCACCTGGCACGACCAACCGCGGAAGAAAGAAGACTATCTCCCTAGACCCCCCACAAGTGTCAGTCCACCCTTCATCCGGCGACAGAAGTACGCCGGTGCCTAGCAAGAGACAGAAAGTGGACGACTACGGCAACTCCCGGTCTTCCGTGGAAGTGATCAGACTGCCGAACAAGCCGGAGCGAGGACACAACCCACTGTCTGGTACTCCGCCTCCTAACCTCTCCGATTATGCAgGCATATCGCGAGAGCTTCTACAGACTATCGCCAGCCAGAGCGGGGTCAGCCTTGCCGCCCTGGAGAGACAACTGGCTGGCTCCACCAACGCAGACTCCGGTCTAAATCTAAGCACAAAGTCTGGCGCGTCAGACGACACGCCTCTGGACTTGGGTGTCAAGTGTTCTATGGACGAAGACGCGCCCCTCAACCTCTCCTTGAAACCGACGCCACCGAGCGCACACGCATCAGACGCGTTGTCAAGGCTGACGTCACTGAGTAGTTCACTCAGCGCAGGCAACGATAGGATATcTCGAAGAAAGCCTGGAGCGAAGCCAAGACGAGTTGTTCCTGAACTCAACTCCCAGATAGCGGAGGCACCGCGGCCGAAGTCTAGCGGTAGTGAGGATAGTGAATCGGTGTCCGCGTGGCCCACCCGTGAAGGCCGCCCGCGGAACCTCGGCCGCGGCGTCAGCAAGCCCAAGAAGAATACCGTGGCCTCATTGTTAGCCCAGAGCCGGGCCTTAGGCCTGAGGCCGGCCTTGGCGCAACAGCTGTTGGGGGAAACTGACCTGGAGAAACTAAAAGCCCTACTCGGCGAGACGGCAAGTACCGACTCTGAGTGTCCCTCGGACAGCTGTCCTTCAGACTCCGACGCGAGTGACACCAGCTATGTGAGGAGATCCAACGATGCGCAACTGAGGTTGCCGCTTGCTTTGGGTTGGAAGCGAGTGACGGTGATCAAGGGTCTATCTCGCAACTGCAACATCAAAGGCGACGTGAGCTACACGCCGCCTGAACCACACGCGGCTACTCCTCTCAAGTCTATGCACGACCTACAGACGTTGGCAGGTTGGAAGCGAGTGACGGTGATCAAGGGTCTATCTCGCAACTGCAACATCAAAGGCGACGTGAGCTACACGCCGCCTGAACCACACGCGGCTACTCCTCTCAAGTCTATGCACGACCTACAGACGatggatggatggatggatggatggatggatggatggatggatggatggatggcaGGTTGGAAGCGAGTGACGGTGATCAAGGGTCTATCTCGCAACTGCAACATCAAAGGCGACGTGAGCTACACGCCGCCTGAACCACACGCGGCTACTCCTCTCAAGTCTATGCACGACCTACAGACGtTGGCAGGTTGGAAGCGAGTGACGGTGATCAAGGGTCTATCTCGCAACTGCAACATCAAAGGCGACGTGAGCTACACGCCGCCTGAACCACACGCGGCTACTCCTCTCAAGTCTATGCACGACCTACAGACGatagatagatggatggatggatggatggatggatggatggatggatggatggatggatggatggatggatggatggcaGGTTGGAAGCGAGTGACGGTGATCAAGGGTCTATCTCGCAACTGCAACATCAAAGGCGACGTGAGCTACACGCCGCCTGAACCACACGCGGCTACTCCTCTCAAGTCTATGCACGACCTACAGACGTTGGCAGGTTGGAAGCGAGTGACGGTGATCAAGGGTCTATCTCGCAACTGCAACATCAAAGGCGACGTGAGCTACACGCCGCCTGAACCACACGCGGCTACTCCTCTCAAGTCTATGCACGACCTACAGACGTTTCTGGACTCGAACCCAAGCCCAGCGATCTCGACAGACAACTTCAGTTTCAGCGCGCGAACGGTCCTCGGAGAGTACGTGCAGCCCGCGGTGGACCTGGCCGACCCGCTGGTCTTCAACGAGCAGGAGATCACTAAGAGGCTAGAAGAAGCGCGCGCCCTAGCCGCTCTAACAGGTCCGCGTCCCACCCCGCCGCCGGTGGACCGGCGCATCGAGCTGGCGCGGCGCCAACAGGCCGCGAGGGACGCCAGGCGCGACGCCAGTGCTCGGGAGCGCGACCAGGTAGTCTACATCGAGCCCTAG
Protein Sequence: MRVEYMVVAYWGQESAGRGSAAAQAQAQAQAALFGFGGRYPPPTTLGVAANQAASLSLHPAASAAWWSMASHLAAQDYLARLQASGLNFPPMADPYSALSALSAAGLKQPVKQPKQPPRNERSGRSSTSSSASTKEKSPSTNTNSQPSMSEWGTSYGFPKTSSPSTMHSHSQSLSSLASLNSLVSAPHQSKSSSKQQSQPSHSVPMHSQSLSTLASLNSLVSAPHQSKSSSKQQSQPSRSGRKPSSSSGKGKDRDLALLRGDLMLAQAAAHGAYHAAVAAAAKGKNMSSLYPFGMPGSEKDRHGGIDSLTGLPHTILSAALEGGDPSSVLGGVRLPPDTEIIKYTSSLAGPKAPPGTTNRGRKKTISLDPPQVSVHPSSGDRSTPVPSKRQKVDDYGNSRSSVEVIRLPNKPERGHNPLSGTPPPNLSDYAGISRELLQTIASQSGVSLAALERQLAGSTNADSGLNLSTKSGASDDTPLDLGVKCSMDEDAPLNLSLKPTPPSAHASDALSRLTSLSSSLSAGNDRISRRKPGAKPRRVVPELNSQIAEAPRPKSSGSEDSESVSAWPTREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAQQLLGETDLEKLKALLGETASTDSECPSDSCPSDSDASDTSYVRRSNDAQLRLPLALGWKRVTVIKGLSRNCNIKGDVSYTPPEPHAATPLKSMHDLQTLAGWKRVTVIKGLSRNCNIKGDVSYTPPEPHAATPLKSMHDLQTMDGWMDGWMDGWMDGWMAGWKRVTVIKGLSRNCNIKGDVSYTPPEPHAATPLKSMHDLQTLAGWKRVTVIKGLSRNCNIKGDVSYTPPEPHAATPLKSMHDLQTIDRWMDGWMDGWMDGWMDGWMDGWMAGWKRVTVIKGLSRNCNIKGDVSYTPPEPHAATPLKSMHDLQTLAGWKRVTVIKGLSRNCNIKGDVSYTPPEPHAATPLKSMHDLQTFLDSNPSPAISTDNFSFSARTVLGEYVQPAVDLADPLVFNEQEITKRLEEARALAALTGPRPTPPPVDRRIELARRQQAARDARRDASARERDQVVYIEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -