Ufer023276.1
Basic Information
- Insect
- Udea ferrugalis
- Gene Symbol
- -
- Assembly
- GCA_950022985.1
- Location
- OX465536.1:10921512-10934323[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-53 4.9e-49 168.3 1.3 2 231 88 299 87 313 0.95 2 3 0.00024 4.1 7.8 0.0 201 231 324 353 321 366 0.87 3 3 1.3e-09 2.1e-05 25.1 0.1 212 275 388 453 383 453 0.88
Sequence Information
- Coding Sequence
- ATGCAGGAACGAGGACGTGGCACCAGCAAACCCCGGCACAAGGATGGGCACCCCCGGCGCATGGGTCAAGGACTCAGCATGGCTACCGAGGATATAATCCAAAACGCCCGTGAGCTCCAATCGGCAGAAGACGAGATAGTAGTACTAGAGCGAGATCTCCAAGAGTGTGACACAAAGTTGGCTGAACAAGACGACGTGATCGGCAAGGTGCAGGCCATCATCGAGCGTGTTGAGGAGTTGAACCGGCCTGATGTGTCCTTGGAGACGGCTCATGATGTACTGGCTGATTtgaagGAATCTCACCCAACAGAATACGACATGTTCGGCCTCGGCACCATAGCCGGTAACATAGTCACTCCATTCCTCAGCGCCATGTTGGCGACATGGCAGCCACTAGAGAACCCTGAAGAACCCATTCCCACCTTCCTCAAGTGGAGGAAACTGTTGACGGCTGAGACCTACAATAGTCTGCTGTGGCAACATTATGTGCCGCATATTACTACTGCTGCTGAAACGTGGAACCCCCGTATCCCAGGTCCAATGCTACGAGCTCTAACGAGCTGGTCTATAGCGTGTCCGGAGTGGGTGTTGTCGGCCGCGGCCTCCCGCTGCGTGGTCCCGCGGATCCTGGCCGCGGTGAGGGCCTGGGACCCCACGGGGGACACCCAGCCGCTGCACCAGTGGATATTGCCTTGGCATGACCTAGCTGGCGAAGCCCTAGCCCGCGGCACCTACCCCGCCATCCGTTCTCGCTTGGCCTCCGCCCTCGGCGCCTGGCACCCCGCCGACGCGTCCGCGCGGACCCTCCTCGCCGCCTGGACCCCCGCGTGGGGCCCCGCGCTCACCGCCATGCTGCACCAACACATCGTGCCCAAGCTGGAGCACTGCCTGCATCACGCGCCGCTCGACCTGCTCAAGGCGCAGGGCACTAATATTGTCGTCATTTATCTAAACGTCCGTGGGGACCCCCTCGCCGCCTGGACCCCCGCGTGGGGCCCCGCGCTCACCGCCATGCTGCACCAACACATCGTGCCCAAGCTGGAGCACTGCCTGCATCACGCGCCGCTCGACCTGCTCAAGGCGCAGGGCACTAATATTGTCGTCATTTATCTAAACGTCCGTGGGGACCCCCTCGCCGCCCGGACCCCCGCGTGGGGCCCCGCGCTCACCGCCATGCTGCACCAACACATCGTGCCCAAGCTGGAGCACTGCCTGCATCACGCGCCGCTCGACCTGCTCAAGGCGCAGGGCACTAATACGGCATGGCTGTGGTGCGTGGACTGGCTGGAGCTGCTGGGCGCGCCGACTGTAGCGGCAGTAGCCtcgcgagcactgctgccgcgCTGGCTCGCCGCCCTAGCCGCCTGGCTCAACACCAACCCGCCCCACGCTACTGTGCTCACTTCTTATACCGACTTTAAGAAAATGTTCCCTGAAGAAGTGCTAAGGGAGCCAGGAGTACGCGACGCCTTCCGCAAGGCGCTGGACATGCTGAACCGCAGCACCGACCTCGACGCCGtggagccgccgccgccgccgcgcttcAACATACCCGTCGACTCGATGCCTAAAGAGACCTCCCGCATCGCTGACGCCCTCGCGTCTACTAACCAACAGAAGAGTTTCTCCGAGCTCCTGGAGTCCCGCTGCATCGAGCGCGGCGTCACCTTCGTGCCCGTCGTCGGCAAAAGCCGCGAGGGACGCCCTCTGTACCAAATCGGCGACAAGCACTGCTACGTCATCAGAAACGTTATTATGTACTCGATTGACGGCGGCAGGACTTTCAACCCGATCAGTATCGATCGGCTGTTAAATATTGTTGaggattaa
- Protein Sequence
- MQERGRGTSKPRHKDGHPRRMGQGLSMATEDIIQNARELQSAEDEIVVLERDLQECDTKLAEQDDVIGKVQAIIERVEELNRPDVSLETAHDVLADLKESHPTEYDMFGLGTIAGNIVTPFLSAMLATWQPLENPEEPIPTFLKWRKLLTAETYNSLLWQHYVPHITTAAETWNPRIPGPMLRALTSWSIACPEWVLSAAASRCVVPRILAAVRAWDPTGDTQPLHQWILPWHDLAGEALARGTYPAIRSRLASALGAWHPADASARTLLAAWTPAWGPALTAMLHQHIVPKLEHCLHHAPLDLLKAQGTNIVVIYLNVRGDPLAAWTPAWGPALTAMLHQHIVPKLEHCLHHAPLDLLKAQGTNIVVIYLNVRGDPLAARTPAWGPALTAMLHQHIVPKLEHCLHHAPLDLLKAQGTNTAWLWCVDWLELLGAPTVAAVASRALLPRWLAALAAWLNTNPPHATVLTSYTDFKKMFPEEVLREPGVRDAFRKALDMLNRSTDLDAVEPPPPPRFNIPVDSMPKETSRIADALASTNQQKSFSELLESRCIERGVTFVPVVGKSREGRPLYQIGDKHCYVIRNVIMYSIDGGRTFNPISIDRLLNIVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -