Tjac002764.1
Basic Information
- Insect
- Tyria jacobaeae
- Gene Symbol
- pnr
- Assembly
- GCA_947561695.1
- Location
- OX387208.1:25927158-25930482[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 3.4e-13 49.5 3.3 1 35 467 500 467 501 0.97 2 2 7.5e-18 2.4e-14 53.1 7.5 1 35 528 561 528 562 0.97
Sequence Information
- Coding Sequence
- ATGGAGGACGTGGGGCAGATGGAGCAGAATGATGTCGACACCACCGCTGAAGCGCTGCAACTTGTCAAGCACGAGGACAGGATGGAGCAGGAGCAAGCCGCCGAGAGGAGTGCGGTGGCCGAGGGTGGTGGGCACCACCAGCCCTCCAACGCAATGGGGCGGGATGGTTCCCCCGCACCACACTCACAGTCCGTGATAACGTCACGTCGCACTGTGCGGACTATAACCGCCGCGGGACATATTACTACAGAGGAGGGGGACCTTGGCGCCGACGATGGTGTCAAAGACGAGCCCCCAGAGCCTGTACCGCACGAGCAGGACACCCAGCAACTTCACCAGTACGCGCCCAAACTTGAAGATGAACAGCGTGAAGCACAGCAGCACTATGATGAGGAGCGACTTCGCCTTGCTGAGGCCGAGACGGCGCGGTATCTCGCTTTCAAGCAGGAGCCCTATCGTACGCTTGCGTCACCGGCACCTGTCGATAAACGCATGCAGCCACAGTATACACGCACTCCGCAGCGCCCTGTCTACAGCCGGAGCTTGGCGCTGCGCTACGGCGCACCTCACCACGTTATTGTGGCACAGGAGGGTGAAAACGAGGAGGCAACACACGACGCATACTTGGCACAAAAGGAAAAAGAGCAACTACATTACGTGGGCGGCGAAGGTGCCGATTCACGCCAGTATACTGCCGTGCTCGGCGAGCAAGTAAATCAGTCCACTGCACTCGAGATGATCCAGACCACTTCACTGAACAACCAGCAAGCGGTCGGAGTAGCATATCAGCAAGTCAAGTATGAAACACGAGGTGAGGGAGAGCCTCGTCCTACCACATATGCTAGCTTACAGCCTGTGACCTCTGTGCATGGCGGCTATGCCTATGCGGGACAGAGCCCACAGTACGGTGGAGCACCTGCGTACGGTGCTTACGCGGGAAGCAGCAAGGAGCTACTGACACTTTACGGTAGTGCGGCAGGAGCTGGAACTGCTACGGGAAACTCTGTAGGAGGATCTCGAGGAGACGAATCGCCCCCCGGGCAGCTATTATACCGGTCGGATCCCACACTTTCTTCATCATCGTTGACGACAAGGGGTGCCCATGTGGTGTATGGCTCTGTTGTACCACAGTCGCAGGCTGTATACGAAGCGCCACCGAGTCCTAACTCACAACAGGTCACGTTGTATACGCACGGCAACACTGTCCAGTACAAGGTTGGAGGTGAACACTACCTGGGTCAAGGAGCCGGGGTTGAATATGTGCCGGTGTCAGGATATGAAGGCGGGCTCCTTGTAGAGGGATACCCTGCGCCAGCGCAAGCTTGGCCTCCACATAATCTATTGCCTATAGACGATGGATTTGATCCAAGTATGGCGGGTATGGGCGAAGTGAAGGAGTGCGTGAATTGTGCGGCAGCGACGACGCCGCTGTGGCGACGCGATGGTACCGGACATTACCTGTGCAACGCTTGTGGCCTCTATACTCGTATCAACGGTGTAAATCGACCACCGCTTAAGGGACAAAAAGCGAAACCACAACAAGCCCTGCCAACAAACGGCAATCGTCGCGTGGGTGTGACGTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGAGACGAAACAACAATGGCGAACCTGTCTGTAACGCGTGTGGCCTCTACTACAAACTGCACAATGTGAACCGGCCACTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAACGAAAACCGAAGAGCATGGGCGGCGGACACAGCGTGCCGCGCCCTGGCGCTGCGCCTCTCTCAGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGCGGGCACGGGGGGCGCCACCCCGCTGCTGCTGCTGCCCGCGAGGCACCAAGCCGATATGATACCAGCGCTAGAGCGCGGTGGCGCCGGCGGCGTGCTGCCGAGCGCGGCGACCCACTACCGCCCGCCGTAA
- Protein Sequence
- MEDVGQMEQNDVDTTAEALQLVKHEDRMEQEQAAERSAVAEGGGHHQPSNAMGRDGSPAPHSQSVITSRRTVRTITAAGHITTEEGDLGADDGVKDEPPEPVPHEQDTQQLHQYAPKLEDEQREAQQHYDEERLRLAEAETARYLAFKQEPYRTLASPAPVDKRMQPQYTRTPQRPVYSRSLALRYGAPHHVIVAQEGENEEATHDAYLAQKEKEQLHYVGGEGADSRQYTAVLGEQVNQSTALEMIQTTSLNNQQAVGVAYQQVKYETRGEGEPRPTTYASLQPVTSVHGGYAYAGQSPQYGGAPAYGAYAGSSKELLTLYGSAAGAGTATGNSVGGSRGDESPPGQLLYRSDPTLSSSSLTTRGAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGAGVEYVPVSGYEGGLLVEGYPAPAQAWPPHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSVPRPGAAPLSVEAHSHKVLPPLYAAVEAGTGGATPLLLLPARHQADMIPALERGGAGGVLPSAATHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157713;
- 90% Identity
- iTF_00157713; iTF_00442113; iTF_00823592; iTF_00824368; iTF_01198325; iTF_00707516; iTF_01361247;
- 80% Identity
- -