Basic Information

Gene Symbol
pnr
Assembly
GCA_932526455.1
Location
CAKOBD010000123.1:1405356-1408658[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-17 3.9e-13 49.5 3.3 1 35 468 501 468 502 0.97
2 2 6.5e-18 2.8e-14 53.1 7.5 1 35 529 562 529 563 0.97

Sequence Information

Coding Sequence
ATGGAGAACGTAAGTCAGATAGAACAGAACAATATGGACAGCAGCGCCGAGGCGCTGCAACTCGTCAAGCACGAAGACAGACTGGAGCAGGAGCAGGCCGCCGAAAGGAACGCTGGGACGGAGGGCGGTGAGCAGCACCAGGCCAACGCCGTGATGGCGCGTGACGGATCCCCGGCACCGCACTCACAGTCCGTCATTACGTCACGTCGCACCGTGCGGACCATCACCGCCGCCGGTCATATTACTACAGAAGAGGGTGATCCTGGCGCCGACGAAGGCGTGAAAGACGAGCCTCAAGAGCCTGTGCCATTAGAGCAGGACGCGCAGCAACTCCACCAGTACGCGCCTAAACTTGAAGATGAACACCGGGAAGCGCAGCAACACTATGACGAGGAGCGCCTTCGTCTCGCGGAGGCGGAGACAGCACGGTACCTCGCTTTCAAGCAAGAGCCTTATCGAACATTAGCGTCGCCCGCGCCAGTCGATAAACGCATGCAACCGCAATACACACGAACCCCACAGCGCCCTGTCTACAGCAGAAGCTTAGCGCTGCGCTATGGCGCACCGCACCACGTGATCGTGGCGCAGGAAGGTGAAGGCGAAGAGGCAACACACGACGCATATTTGGCACAAAAAGAAAAAGAACAATTGCAGTACGTGAGTGGTGATGGTGCCCCCGATTCACGCCAATATACCGCCGTGCTCGGCGACCAAGTACCCCAGTCTACGGCGCTGGAGATGATTCAGACTACGTCCCTGAACAACCAGCAAGCGGTCGGTGTTGCATATCAGCAGGTCAAATATGAAACGCGTGGTGAAGGAGAGCCACGACCAAGCACGTATGCGAGCCTACAGCCCGTGACCTCCGTACACGGCGGCTATACATATGCCGGTCAGAGTCCTCAGTACGGTGGAGCCCCTGCGTACGGCGCTTACGCCGGAAGCAGTAAGGAATTATTGACATTGTATGGAAGTGCTGCGGGGCCCGGAGCCACTTCGGGAAACTCGGGCGGTGGCGCTCGCGGTGACGAGTCGCCGCCTGGACAATTATTGTACCGCTCAGATCCAACGCTCTCTTCGTCGTCGTTGACGACGAGAGGCGCCCATGTGGTGTACGGCTCCGTTATACCGCAGTCGCAAGCTGTGTACGAAGCACCGCCGAGTCCTAACTCACAACAGGTTACTTTGTATACGCACGGCAACACTGTCCAGTACAAGGTCGGTGGTGAACATTATCTGGGACAAGGAGGTGGTGTCGAGTACGTACCGGTGTCGGGGTACGAAGGGGGTCTGCTAGTGGAGGGCTATCCAGCACCGGCGCAAGCATGGCCTCCGCATAATCTGTTACCTATAGATGACGGATTTGATCCAAGTATGGCGGGTATGGGTGAAGTAAAGGAGTGCGTGAATTGTGCGGCAGCCACCACCCCGCTGTGGCGGCGCGACGGTACCGGACACTACTTGTGCAACGCCTGCGGCCTGTATACACGTATCAACGGCGTCAACCGACCGCCTCTAAAGGGACAAAAAGCAAAACCGCAACAAGCCCTGCCAACCAACGGGAATCGTCGCGTCGGTGTGACTTGCGCCAACTGTCGTACCTCCAACACGACGCTATGGAGACGAAATAACAACGGCGAGCCTGTCTGTAACGCGTGCGGCCTCTACTACAAACTGCACAATGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAACCGAAGAGCATGGGCGGCGGACACAGCGTGCCTCGCCCCGGCGGCGCGCCGCTCTCAGTGGAGGCACATTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCCGTGGAGGCGGGCGCGCTGCTGCTCCCCGTGAGGCACCAAGCCGATATGGTACCAGCGCTAGAGCGCGGCGGCGGCCTGCTGCCCGGCTCGGCGGCGCACTACCGCCCGCCGTAA
Protein Sequence
MENVSQIEQNNMDSSAEALQLVKHEDRLEQEQAAERNAGTEGGEQHQANAVMARDGSPAPHSQSVITSRRTVRTITAAGHITTEEGDPGADEGVKDEPQEPVPLEQDAQQLHQYAPKLEDEHREAQQHYDEERLRLAEAETARYLAFKQEPYRTLASPAPVDKRMQPQYTRTPQRPVYSRSLALRYGAPHHVIVAQEGEGEEATHDAYLAQKEKEQLQYVSGDGAPDSRQYTAVLGDQVPQSTALEMIQTTSLNNQQAVGVAYQQVKYETRGEGEPRPSTYASLQPVTSVHGGYTYAGQSPQYGGAPAYGAYAGSSKELLTLYGSAAGPGATSGNSGGGARGDESPPGQLLYRSDPTLSSSSLTTRGAHVVYGSVIPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYPAPAQAWPPHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSVPRPGGAPLSVEAHSHKVLPPLYAAVEAGALLLPVRHQADMVPALERGGGLLPGSAAHYRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00157713;
90% Identity
iTF_01502624;
80% Identity
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