Basic Information

Insect: Tyria jacobaeae
Gene Symbol: -
Assembly: GCA_947561695.1
Location: OX387217.1:16423151-16431901[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0055 0.44 11.6 1.1 3 23 653 674 652 674 0.96

2 23 0.34 27 6.0 0.3 1 22 1055 1076 1055 1076 0.95

3 23 6.5 5.2e+02 1.9 0.2 1 22 1118 1139 1118 1141 0.82

4 23 0.012 0.95 10.5 2.0 3 22 1152 1171 1152 1171 0.96

5 23 0.82 66 4.8 0.0 3 23 1180 1201 1178 1201 0.89

6 23 0.017 1.4 10.0 0.2 3 23 1221 1242 1219 1242 0.96

7 23 0.0019 0.15 13.1 2.5 1 23 1248 1271 1248 1271 0.95

8 23 0.12 9.9 7.3 0.0 1 23 1298 1321 1298 1321 0.90

9 23 0.0054 0.43 11.6 3.5 1 23 1326 1348 1326 1348 0.97

10 23 0.076 6.1 8.0 0.1 1 23 1354 1377 1354 1377 0.95

11 23 0.0023 0.18 12.8 1.3 1 23 1390 1412 1390 1412 0.97

12 23 0.00018 0.014 16.3 1.8 1 23 1468 1491 1468 1491 0.97

13 23 0.0083 0.67 11.0 1.1 1 23 1551 1574 1551 1574 0.96

14 23 0.0023 0.19 12.8 2.1 2 23 1601 1623 1600 1623 0.95

15 23 0.086 6.9 7.8 0.1 2 23 1629 1651 1628 1651 0.93

16 23 0.0098 0.78 10.8 0.2 1 21 1695 1715 1695 1716 0.95

17 23 0.00041 0.033 15.1 1.0 1 23 1726 1748 1726 1748 0.93

18 23 8.7e-05 0.007 17.3 0.3 2 23 1838 1860 1838 1860 0.93

19 23 3.9e-07 3.1e-05 24.7 1.4 3 23 1867 1887 1866 1887 0.98

20 23 0.26 21 6.4 1.8 1 23 1906 1928 1906 1929 0.94

21 23 0.12 9.6 7.4 0.0 1 23 1954 1976 1954 1976 0.97

22 23 0.027 2.2 9.4 0.6 1 23 1982 2005 1982 2005 0.95

23 23 0.00025 0.02 15.8 0.4 1 23 2013 2036 2013 2036 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0055	0.44	11.6	1.1	3	23	653	674	652	674	0.96
2	23	0.34	27	6.0	0.3	1	22	1055	1076	1055	1076	0.95
3	23	6.5	5.2e+02	1.9	0.2	1	22	1118	1139	1118	1141	0.82
4	23	0.012	0.95	10.5	2.0	3	22	1152	1171	1152	1171	0.96
5	23	0.82	66	4.8	0.0	3	23	1180	1201	1178	1201	0.89
6	23	0.017	1.4	10.0	0.2	3	23	1221	1242	1219	1242	0.96
7	23	0.0019	0.15	13.1	2.5	1	23	1248	1271	1248	1271	0.95
8	23	0.12	9.9	7.3	0.0	1	23	1298	1321	1298	1321	0.90
9	23	0.0054	0.43	11.6	3.5	1	23	1326	1348	1326	1348	0.97
10	23	0.076	6.1	8.0	0.1	1	23	1354	1377	1354	1377	0.95
11	23	0.0023	0.18	12.8	1.3	1	23	1390	1412	1390	1412	0.97
12	23	0.00018	0.014	16.3	1.8	1	23	1468	1491	1468	1491	0.97
13	23	0.0083	0.67	11.0	1.1	1	23	1551	1574	1551	1574	0.96
14	23	0.0023	0.19	12.8	2.1	2	23	1601	1623	1600	1623	0.95
15	23	0.086	6.9	7.8	0.1	2	23	1629	1651	1628	1651	0.93
16	23	0.0098	0.78	10.8	0.2	1	21	1695	1715	1695	1716	0.95
17	23	0.00041	0.033	15.1	1.0	1	23	1726	1748	1726	1748	0.93
18	23	8.7e-05	0.007	17.3	0.3	2	23	1838	1860	1838	1860	0.93
19	23	3.9e-07	3.1e-05	24.7	1.4	3	23	1867	1887	1866	1887	0.98
20	23	0.26	21	6.4	1.8	1	23	1906	1928	1906	1929	0.94
21	23	0.12	9.6	7.4	0.0	1	23	1954	1976	1954	1976	0.97
22	23	0.027	2.2	9.4	0.6	1	23	1982	2005	1982	2005	0.95
23	23	0.00025	0.02	15.8	0.4	1	23	2013	2036	2013	2036	0.96

Sequence Information

Coding Sequence: ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCTAAAATCAAGGATTGCGTGTCTGTAGAGATAAATGAAAATGATGAGCTGCCCACAAATGTCTGTAGGAAATGCATGGACAATGTCAATAATTGGCATAAGTTTAAAAATGTTTGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTTCAAATTAAGAGTGAACCTTTGTCTGATGAAGTTTATGATGATGGAGTTGTTATTGAGGGTTCATATCCTGATAGTGAGAATGCCAGTGTGGCAAATAAAGTTCAACCTGAAGGTCCCCCAATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAGGTGTGTGGATCCTCGAATGGATTGGCACAGAGTCTATGCCATCTTGGACATGGTTCAAGACAATGAGGTGATTGACTCACTACAGTCAAAGGAAGAGTGTGACGTTTTGCAACACTCTGATCATGACTCTGAATCTGAGGCCGAACTTCAACCAGATATTGAAGATAACTATGTAGATTGCATAAATGGCTATGTGTGTAAAAATAGGAAGGTGATATCAAAGAATCCTAAATTGTCACCGTCTATGAACAACATTAAAATCAGAGAAACTCAGCAACTCAGGAAACAAAAATTAGAATTCCCCAAACAGCACTGCCAGCGTCCTAAAAATGCTTGGCAACTGTTATTCACTGATGACCTACTTGAATTGATAGTAACCTCTACTAATGAAAGTATTGTCAGGAATGAAAAAAGTGACTCCGCAACCAATGTCACCGAAATAAAAACTCTTATCGGCATTTTGTATTTGCACGGAATAATGCGGCCGACGCATGAGAAATGTACTGACCTATGGCGTGGTGAAATTGGTTTGCCTTGCGTTAGAAGTTCCATGAAATACGAGCGTTTTAAATTTCTTTTACAAAACATAAGTTTTGACAAAGAGGAAGATGACAGCATTATACAGTTTGATATAATGAAACGAATGCGTAAGGTATTTGAAATCTTTGCTATAAATTGTAGAACAGCTCACGAGATCGGGAATATTGCGGTTATTGATGAGATCATCGTTCCAGTTTACGGGCCTTGCCCATTTCGATATGATATTGATAAGAAACCCCTGAAGCGCGGAATAAAGATGATACTGCTTGTAGACTCGTCAACATTCTATATGAGCAATTTAGATGTCATTACTGACTCATACTTCGGCGCTGAAGAAATTACCAAAAAATTAGTTCAGCATTTAGCTGGTACTGGTAGAACTATTGTTATGGATAGCTGGTATACTTCTTCGACATTGATGGAATGTCTTAGGAACGAGTATCAATTATTTACAATAGCAGCCTTAAATCCAAAGAATGACTGGATTCCCCCCTTGTTTCTTTCTCAGTATAGAAAATGTAGAACATTCATGTCTGGATTTATTGATCATGATGTTTCACTTACATCTTATGTGAATTCTGATTTAAAAGCAATAAATATTATGACTAATGAGCCTAGATTTTACAGAAAAGGTCATGTTAACCAAACTACAGTGGTGTCTGTTTATAAAAGGAATCAATCGGCTGTGGAAATGGTTGATGTTGTAATGAATTACTATACAACTATGCAACATACTAATGATTGGACTCTATCATTGTTCTTTACATTATTAAATATTGCATCTGTCAATGCCCAGGGCGTGGAGAGTGAGAAAGATGAAGAGGAAGATGATGAAGAATTAAATGAACCTACTCAACCATTCCCCAAAATGCCTCTCATGCCGGAAGTATCCATAACAGTTATGCGTCCTACGGGTGAGACCTTGCATGCCAGGCAAGGCATACATCAACTCGCCTCTAAGGACTGTCTTGTCTGCGGCCGCACTTATAGATATTCCCACAATGCTCGTCGACATGAGCTTACCGCTCACAGCTTTGACAGGTACACTAACAAAATAACTCCGAAAAAATCTCTAGGTCACTTTCAACCCAAGTTAAGACCTAACCCATTTAACCCTAAATCACGTTTGATGCCTAATCCCATTAGTCATAAGATGCAATTTATGTCCAAAAACATCCCAACGAAAGTAGTACCTATAAATAAGGTTATCACTCCTCAGAAGCCCATACCAATTAAATCGGGTAAAGCGCCCCAAAACAATTTACCTTATCCACTTCGTATTAAAGCACTCAAAGATTTACAAATTAAGAAAAAGGAACCTCAAATTTTAAAGACTTTGTTAACCTCTAAGCCTGAAGTTCTGGTATCTGAACCTGAAATAATAAATTCTGGACCCGAAAGTCCAGAGACACTTATATCTGAACCTGAAATTGCTTCTTTCCAAGTAGAAGCAATACTTTCGGAACCCGATGGGGATGTCTACGATAACCAGCAAGGTGACGAAGAAGTTGATGGAGATATGCATAATAACCAAGGTCAGAATTATGATACAGTTGAAATGAACTCTGAAAATGAAATTGAGATAGCACGTCAACAAGGTGACGAGGTAGAAGACGAAGAACAGGCAGATGGTGATGAAAATATGGATCAAGATGATAATATGGATGGAGGTCAGAGTGACAACGATCAAGACGTAGTTGATGATAACGCAGAAAGTCAAGAGAATGTAGAAATGGAGGATGGCTTAGACATAAAAGCTGAACATGACATAAAGGAAGTTGAAGATGTTCTAGAGGAGAGGGATAATGAAGAAATTGAAATGAATCACGATGGAAACGAGGAGGAAGAAGACGACGATTTGCCAATAACGATACAGCCAGTAGTCGAAATTAATGAAGACTTTCAGGCCAATTCGTTTAATACCGACGTAGCTGATGGTGACGAACTTGACGAGACCGTTGATCCTAACGAGACTGTCGATGAGGAGGAGGTAAAAGAACTCGACCCTGAAAAAACCTATGTAACAAAAACGCAACGAGATTTCATATTGAAGTACCGTGACGTTATTGAGCAAATCAATACAAAACGTTGTTTGTGTTGTGACAGAGAACATCCTCGCCGAAAAGCAGTTATTCAGCATTTACAGAAAAACGGACACAAGGTACCCAAACACACGTGTTATAATTGCGTTGTTACATTCGGGCATATTGGTGCTCTGCTCAGCCACATGAGGTCAAATTCTTGCACTGATTTGTGGAAAATTATATATAACGAAAATGGCATTACTGATGACTTGGTTCTAGAGGATGAACCGAAAGAGGTCAAAGTTCAGTATAAAGATATTTTTAATGCTAGATCTTATGCTTGCAAACTCTGTCCAGCAAAATTCCAGTTGAAACAATTCATTATGAAACATGTTTTGGATGCTCATGAAGATGGACAATCTAGGGTGCCGCTCGGATGTGTCCATTGTAGAGCAAGATTTAAGGAGAAGAGTTTGCTTAAAAAACACATTCGGAAAGGCGATTGCACAGTTTATGTTGCATGTGACTTGTGCCCGGAAACGTTCGGGAATATGCAGACTTTCAACGATCACGCGTTAGCTGTTCATGCTGGTAGTTTCGAGTCAGATAGTCAGAGCAAATGTGTTGACGGTCGCCCGACTGACTGTCCATTGTGTGGGAAGAAAAATAGCAGCTATCCAAATCTGGTAAAACATTTGAAAATTATTCACAATGAGGAAAAACCTCACTACTGTCAGCATTGCGACTCTAAATTTGAACAAGCTGCCGATCTCAACAAACACATTTACATGGAACATTCTGACAGAACTTTAGGCATGCCACAGAACAATGAGCCGGACATGTCCATTGTGAAGGAAGAAGCAGAAGAGTATCATTATTCCTGTACTGAATGTAACGCCATATTTGAAACTGTCGACGCCTGGACAGATCATCAAGTGGCCGAACACAACCAAGTGGCGCATCATTGCGACCAATGCGACAAGAAATTCTTGCGTCCCTCGGAGCTTGCGGAACACAAGAATACGCATTTAAGGGTTAAGTTTTATCCATGCAGCGTTTGTGCCAACTCTTACAGTACCCCTCAAAAACTATCAGAACATGTACAACAAGCCCACCCAGGAATTGGCGCAATAGCTGCAGCAGACTCAGAATTCTTCTGTGATATCTGTATCAGGTCATTCAAAAGTCGACAAGCATATTCTAACCATATGCGTATACATGCAAAAGTGCCCACGACTAATAGAAAACCAGGAGATACTACTACTACTTCTTCTAACAAAGGGTTTTCACCATCAATTATAGGAAAACCCATCAAACAAGTATATCCTATGGTACAACCCGGCTTTGTGTCATTTAAGCCTCATTATAATATTCCTAACGCTCCATATTCATGTGACATTTGTGGAAAGGGATTCATGCATAAAAAGAATATATGGAAACACAAGAAAGTTTTACATGCGGATATATTAAATGAAAGAAACGACAGTGAGGAGAATACCATGCAAGCTTCCACTGAAGAAGACGAGTTCAATCCAGATGAAAATGGCGCTATTCTCTCTACGCCGCAGTTTAACAGTTTCAACTTTGGCAATTTCGCGAATAATGTACAACAAACGCAACAAGATACAATGCCATATTCATGTGAATTATGTCTCAAACGATTTCCACTTAGAACCAGTTTGTGGAAACATAAACGTGCTAAGCATGGAATCGTTAATCCTAATACTAGTGGCGGCAACGACTCACAAACGCCCGCGACAAGTGGCGAAGGAAGTAGTAGATCGAGTTGCACAATATGTAGAATTACATTTTCGGATAAGAAATCATATTACCGTCATAGAAAAAACGTGCACAAGTCCACTGTTCAAATGTGCAAAATATGCGGTAAGCCTCTTAACTCAACTTTAGAACTCTATGAACATTTGAAGGCTGCACATGCTAGAGAACTTTTAGGTTACAATGCTAATCAAGGTTCCAGTAAATCTCACGAAGTTGCACAAGAAATGGAACCTGATTATGACAATGACCATGACTCAGTAGATCCTAGCGTTGACTATCAGGCTCGCTACCCTTGTGACACATGTGGTAAACAATTTGTTGGTTTGTTAGCTTTACAGAACCATCAGTGTATTAATCAGGCCCCACCTCAACCACAAACATTCGACTGCGAGATTTGTCACAAGAGCTATACGTCAATATCGGCCCTTAAAAGCCACCGTGGATGGCATTTACGATCACCGGATGGAAAAGCAGCTGCTAATAATAGCGGGCTTTGGATGCCTCAACATAAAGTCACTAGCAAAATAAGTAAACATGAAGTTATTGATCCAGTACAGCTTGCTAAAGTGACGCACTCCAGCCCTGCAGCTGCAGTTGCCGCTAAAAGAAGACTCCCACCTGAAGTCGAAGTCACCGTTGTTAATCCAAATAAAAAAATGCGCTCTGATGATTCTGTTGAATTAGAACAACAAAACTCTAGTTCAGCTGAAGACAGATATTGCAACATATGTGACAAGGAGTTTACAAAACGAGCAGCTTACCAGCGCCATATGGACGAGGTCCATCAACCGAACTCGGTATTTTGTCCAGTGTGTGATAAGAGTTTTACGAGAAAATCGACGCTTCTTATTCATATGAAGAAGCACTATGAGAGTGGTGAAGGCAGTTCAAGTATGGTTGGACAAGTCGAGGAAGAGATGCATACGTGTGACTTATGTGGAGGTCAATACGATGATGAACAATCGTTGAGAGATCACCGAGTGAGGCATCACGGCGAAGAGTCTGAAGAAGATGAGGAAGATGACGGTGACGACGGCAACGTGCCCATTCCCCCTCCGGGTGAGTTTACTTGCGGCCAGTGTGGAGATGGTGTAGCAACACCTCGAGATTTAATCGCTCATCGTACAATGCACTCTACTCCTTCTAAATTCTTTTGTAACATATGCAAAGTATACTTCGCGAGGGCGTTGGACCTTTCCTCACACACAAGGGCTAGACACGCGGATAACGACAAGGTATTCTTTCCTTGTGCCATGTGCGACAGGTTCTACATGAACAAAAAGAGTTTGCAGCGTCACATTGAGATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVEINENDELPTNVCRKCMDNVNNWHKFKNVCERTQNKLQSLISKDGSQLEEVQIKSEPLSDEVYDDGVVIEGSYPDSENASVANKVQPEGPPILASLGLTPRSDKRCVDPRMDWHRVYAILDMVQDNEVIDSLQSKEECDVLQHSDHDSESEAELQPDIEDNYVDCINGYVCKNRKVISKNPKLSPSMNNIKIRETQQLRKQKLEFPKQHCQRPKNAWQLLFTDDLLELIVTSTNESIVRNEKSDSATNVTEIKTLIGILYLHGIMRPTHEKCTDLWRGEIGLPCVRSSMKYERFKFLLQNISFDKEEDDSIIQFDIMKRMRKVFEIFAINCRTAHEIGNIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMILLVDSSTFYMSNLDVITDSYFGAEEITKKLVQHLAGTGRTIVMDSWYTSSTLMECLRNEYQLFTIAALNPKNDWIPPLFLSQYRKCRTFMSGFIDHDVSLTSYVNSDLKAINIMTNEPRFYRKGHVNQTTVVSVYKRNQSAVEMVDVVMNYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESEKDEEEDDEELNEPTQPFPKMPLMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKSLGHFQPKLRPNPFNPKSRLMPNPISHKMQFMSKNIPTKVVPINKVITPQKPIPIKSGKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDGDVYDNQQGDEEVDGDMHNNQGQNYDTVEMNSENEIEIARQQGDEVEDEEQADGDENMDQDDNMDGGQSDNDQDVVDDNAESQENVEMEDGLDIKAEHDIKEVEDVLEERDNEEIEMNHDGNEEEEDDDLPITIQPVVEINEDFQANSFNTDVADGDELDETVDPNETVDEEEVKELDPEKTYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKEKSLLKKHIRKGDCTVYVACDLCPETFGNMQTFNDHALAVHAGSFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMPQNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQAHPGIGAIAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDTTTTSSNKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDEFNPDENGAILSTPQFNSFNFGNFANNVQQTQQDTMPYSCELCLKRFPLRTSLWKHKRAKHGIVNPNTSGGNDSQTPATSGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSHEVAQEMEPDYDNDHDSVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQAPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPVQLAKVTHSSPAAAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSMVGQVEEEMHTCDLCGGQYDDEQSLRDHRVRHHGEESEEDEEDDGDDGNVPIPPPGEFTCGQCGDGVATPRDLIAHRTMHSTPSKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01075719;
90% Identity: -
80% Identity: -