Tjac013207.1
Basic Information
- Insect
- Tyria jacobaeae
- Gene Symbol
- Rel
- Assembly
- GCA_947561695.1
- Location
- OX387211.1:7284836-7314554[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-36 8.6e-33 114.2 0.4 1 168 5 174 5 175 0.88 2 2 2.7 1.8e+04 -4.0 0.0 40 67 319 343 302 351 0.59
Sequence Information
- Coding Sequence
- ATGAAACCATCTTTGCAAATCATTGAGCAGCCCCAGAATCACTTTCGGTTCCGGTATGTCAGTGAGATGATCGGAACGCATGGTTGTCTTCTCGGCAAGTCCTATGGTACCAACAAAACGAAAACCCATCCAACCGTCGAGCTAGTGAATTACGTGGGCCAGGCATTAATAAGGTGTAGTTTGGTACAACACAACAACCCAGAAGAGCATCCCCACAAACTCTTAGAGGATGAACAAGACCGGGATGTTAGTCAACTAGTGCCTGAACAGGGGAGTTATAAAGTGGCATTCGGTGGCATTGGCATAATACATACGGCCAAGAAAGACGTACCTGCCCTGCTCTTGAAGAAACTTACGGAATCAAATAGAAATCCTAACATCGATATGAGAGATCTTCAAACAAGATGTGAAAACATGGCGAAAACAATAAATTTAAACATAGTTCGACTGAAATTCAGCGCTCACGATGTCCAAACTAATGAAGAGATTTGCACGCCTGTATTTTCTGAACCCATACATAACATGAAGAGCGCGGCTACCAACGACTTGAAGATATGCCGAATAAGCCGAACTTCTGGTAGCGCATCCGGTGGAGAAGATGTCTTCATATTAGTGGAGAAGGTGAATAAAAAGAACATTATGGTTCGCTTCTTTGAGGTGGATGAATCTGGAGAGAGGATTTGGGAAGGTGTCGGTCAGTTTATGCAAAGCGATGTACACCACCAGTACGCCATTGTGTTCAGGACTCCTCCATATAAGGATCGTAAGACCACAGAAGACGTCCAGGTGTACATAGAACTGGTGCGACCCTCGGACGGTCGCACGAGCGAACCCAAAGATTTCAAATACAAGGCTGAGCAAGCCTACAAGCAGATTAAGAAGAGAAAGGTCAACTCATCATTCTGTTCCATTGGTAGTTCTTCAAGTGGGTCATTGAAGAGTACAAGTGATATTCCAGTAACAGTGATTAACTATCAAGAAGAGTCAGTAAACCGCGGCATGTCTGAGGTCCCTATGGCGCCTCACCCTTCGTTTGTATTGAATCAGCATATATTCGCAGTATCGCCCAGCCAATGTGACATGGGTAGTGCGTTAGCTGCCTCAGAGGTAAATCATTCGCCTCTATCCAGCCCCATTTGGTCCCAGATGAATAATGTGCTTCGACCAAGTGATCCGCTATGCACAGACTTGCATCTAAACTCTGCAGATTTTGAAATGATGCAAAATATTGAACCCGAGAGCCGAAAATTATCAGAGGGCATGACTCAGTTTTTTAGCGAATATTTGAAAAGCTACAATGAAGAGTTCCCGGGTGAAAAAGCTTTAGAAAGTATAGAATTTCGACCATCACCAGCCATAGTATCAGACTCCGGTCGAACGTCTCACATAAAGCGTGAGGCTCGCGCCGAGTGTCCCAACGTTGAGGCTCAATCTGCAAGTCCCACGCTAAAGGAGAACATTACAATTGAGAACAATAAAAATAATGCGGAATACAACGCGTTTTATAAAGCAGAGGACGGCATCGAAGTCAAAAAGCTGGTTAAAGATTTATGTGAAATGATTCGTGACAAGAAAGGTTTCAAGAAACAGGAAGTCAGGAGTCGTTTGGATAGACTCTTCGACATTCGATTATCAAATGGTGATACGTTCCTTCACATGAGTTTGTGTTCGGACCAGACCTGTCTGGAGTACATAGTGAAAATGATCCACAACGTGAAAGCGACACACCTGCTTGACTGTTCGAATGACAGGCAACAGACTACATTACATCTGGCAATACTAAACGATATGCCCAAAATTGTATCTCTGCTCGTAACTAAAGGGCGTTGTTTTAAGACAGGGGAGTATTCAGAAGATTTTGAATACTCCAATGTCTTAAAACAACGCCTTGAAGATTTTGGTACTACTTTTGACAGCCTAAAAGTTTTATACTCACATCAGCTCTTTGTAGGTGCCAACCCAATGTTGAAAGACGATCAAGAAATGAACGCAATTCACTACGCTGTCAAGTACAGATCTTGTCTACAGCCACTGCTAGAAGCTATTAAGAAAAACGACGTGCCCTGCGATTTGGACGACTACAACAATAAAAGGCAATCAGCTTTACACATGGCGGTAATCGAGGATTCGGAGCGCAGTGCTCGTCTGTTGCTAGAACACGGCGCGAGCTACAGCGTGCGCGACGAGTACGGCAGAACTCCTCTACACCTTGCCGCTTACGACGATTGCCTTGAAGTTACTAAAACTCTACTTCAATTTACGAAACAGAAAGATGTCGACGTTACGGACGATTCTGGCAACACCGCATTACAGATAGTTTGCGGCGGTACTGTTAGAAATAATACAGTTATGATCGCGCGAATGTTGCTTGATCACAAGGCAAGTCCTATGAAAACGGAAAAGGGTAACGATTCAGCATGGCGGCTGGTAAAGAATAAACTGGAGTTGAAGGCGGTCATGTGGGACTATGTCGCCGGCGAAATTATGGACGAAAACGATATTAAGTCCGAACCGGAAGAAGAATTTGATTCTGCAGACGAAGGTGAGTACTGCGAGCAGGGCCTGCAGGCGTTGAGTATGTACAGCCGTGAGGTGTGCGTGCTGCTGGACGCGGCGGGTGCGTGGCGCGCGCTGGCGGAGCGCCTGCGGCTGGATTCGCTGCTGGAGTGGTACGCCACGCAGCCCAGTCCCACGCTCACGCTGCTCAACCATCTCAGAGATTCACGCGATGACATCACATCGAAATCATTGGCGTTGATATTGGAAGACATAGGACAATCGAACGCAGCTTCTATCATAAGAAGATGCATTGAATGA
- Protein Sequence
- MKPSLQIIEQPQNHFRFRYVSEMIGTHGCLLGKSYGTNKTKTHPTVELVNYVGQALIRCSLVQHNNPEEHPHKLLEDEQDRDVSQLVPEQGSYKVAFGGIGIIHTAKKDVPALLLKKLTESNRNPNIDMRDLQTRCENMAKTINLNIVRLKFSAHDVQTNEEICTPVFSEPIHNMKSAATNDLKICRISRTSGSASGGEDVFILVEKVNKKNIMVRFFEVDESGERIWEGVGQFMQSDVHHQYAIVFRTPPYKDRKTTEDVQVYIELVRPSDGRTSEPKDFKYKAEQAYKQIKKRKVNSSFCSIGSSSSGSLKSTSDIPVTVINYQEESVNRGMSEVPMAPHPSFVLNQHIFAVSPSQCDMGSALAASEVNHSPLSSPIWSQMNNVLRPSDPLCTDLHLNSADFEMMQNIEPESRKLSEGMTQFFSEYLKSYNEEFPGEKALESIEFRPSPAIVSDSGRTSHIKREARAECPNVEAQSASPTLKENITIENNKNNAEYNAFYKAEDGIEVKKLVKDLCEMIRDKKGFKKQEVRSRLDRLFDIRLSNGDTFLHMSLCSDQTCLEYIVKMIHNVKATHLLDCSNDRQQTTLHLAILNDMPKIVSLLVTKGRCFKTGEYSEDFEYSNVLKQRLEDFGTTFDSLKVLYSHQLFVGANPMLKDDQEMNAIHYAVKYRSCLQPLLEAIKKNDVPCDLDDYNNKRQSALHMAVIEDSERSARLLLEHGASYSVRDEYGRTPLHLAAYDDCLEVTKTLLQFTKQKDVDVTDDSGNTALQIVCGGTVRNNTVMIARMLLDHKASPMKTEKGNDSAWRLVKNKLELKAVMWDYVAGEIMDENDIKSEPEEEFDSADEGEYCEQGLQALSMYSREVCVLLDAAGAWRALAERLRLDSLLEWYATQPSPTLTLLNHLRDSRDDITSKSLALILEDIGQSNAASIIRRCIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01360376;
- 90% Identity
- -
- 80% Identity
- -